RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 REG3GQ6UW15 175 aa6.75□□□□□ -1.33
PKP4-206ENST00000452162 DEFB105AQ8NG35 78 aa6.74□□□□□ -1.33
PKP4-206ENST00000452162 KIAA1109Q2LD37 5005 aa6.74□□□□□ -1.33
PKP4-206ENST00000452162 IGLV5-48A0A075B6I7 105 aa6.74□□□□□ -1.33
PKP4-206ENST00000452162 ERC2-IT1O76042 136 aa6.73□□□□□ -1.33
PKP4-206ENST00000452162 Q6ZVQ6 151 aa6.73□□□□□ -1.33
PKP4-206ENST00000452162 C3orf22Q8N5N4 141 aa6.73□□□□□ -1.33
PKP4-206ENST00000452162 C9orf163Q8N9P6 203 aa6.73□□□□□ -1.33
PKP4-206ENST00000452162 APOBP04114 4563 aaKnown RBP6.73□□□□□ -1.33
PKP4-206ENST00000452162 ST20-AS1Q8NBB2 130 aa6.73□□□□□ -1.33
PKP4-206ENST00000452162 A0A087WVE0 104 aa6.72□□□□□ -1.33
PKP4-206ENST00000452162 CHTF8P0CG12 524 aa6.72□□□□□ -1.33
PKP4-206ENST00000452162 UBE2BP63146 152 aa6.71□□□□□ -1.34
PKP4-206ENST00000452162 IGLV5-52A0A0A0MRZ9 124 aa6.71□□□□□ -1.34
PKP4-206ENST00000452162 UQCRQO14949 82 aa6.71□□□□□ -1.34
PKP4-206ENST00000452162 OXTP01178 125 aa6.71□□□□□ -1.34
PKP4-206ENST00000452162 DPH3Q96FX2 82 aa6.7□□□□□ -1.34
PKP4-206ENST00000452162 DNAH8Q96JB1 4490 aa6.7□□□□□ -1.34
PKP4-206ENST00000452162 ATOX1O00244 68 aa6.69□□□□□ -1.34
PKP4-206ENST00000452162 FAM19A1Q7Z5A9 133 aa6.69□□□□□ -1.34
PKP4-206ENST00000452162 FAM236DA0A1B0GTK5 79 aa6.69□□□□□ -1.34
PKP4-206ENST00000452162 FAM236CP0DP71 79 aa6.69□□□□□ -1.34
PKP4-206ENST00000452162 KRTAP10-1P60331 282 aa6.69□□□□□ -1.34
PKP4-206ENST00000452162 C1orf195Q5TG92 126 aa6.69□□□□□ -1.34
PKP4-206ENST00000452162 PHF5AQ7RTV0 110 aaKnown RBP6.69□□□□□ -1.34
PKP4-206ENST00000452162 KRTAP11-1Q8IUC1 163 aa6.69□□□□□ -1.34
PKP4-206ENST00000452162 HSPG2P98160 4391 aa6.69□□□□□ -1.34
PKP4-206ENST00000452162 RYR1P21817 5038 aa6.69□□□□□ -1.34
PKP4-206ENST00000452162 CXCL6P80162 114 aa6.67□□□□□ -1.34
PKP4-206ENST00000452162 HAMPP81172 84 aa6.67□□□□□ -1.34
PKP4-206ENST00000452162 PRLHP81277 87 aa6.67□□□□□ -1.34
PKP4-206ENST00000452162 LINC00474Q9P2X8 69 aa6.67□□□□□ -1.34
PKP4-206ENST00000452162 PANO1I0J062 215 aa6.66□□□□□ -1.34
PKP4-206ENST00000452162 SMIM29Q86T20 159 aa6.66□□□□□ -1.34
PKP4-206ENST00000452162 HERC2O95714 4834 aa6.65□□□□□ -1.34
PKP4-206ENST00000452162 A0A1W2PNM2 257 aa6.65□□□□□ -1.34
PKP4-206ENST00000452162 C1orf137Q5JT78 98 aa6.65□□□□□ -1.35
PKP4-206ENST00000452162 EPM2AB3EWF7 344 aa6.64□□□□□ -1.35
PKP4-206ENST00000452162 H0Y9J4 135 aa6.64□□□□□ -1.35
PKP4-206ENST00000452162 CRYGAP11844 174 aa6.64□□□□□ -1.35
PKP4-206ENST00000452162 COX7CP15954 63 aa6.64□□□□□ -1.35
PKP4-206ENST00000452162 SPACA4Q8TDM5 124 aa6.64□□□□□ -1.35
PKP4-206ENST00000452162 FAM30AQ9NZY2 134 aa6.64□□□□□ -1.35
PKP4-206ENST00000452162 A0A1B0GW54 56 aa6.63□□□□□ -1.35
PKP4-206ENST00000452162 Q8NBF4 154 aa6.63□□□□□ -1.35
PKP4-206ENST00000452162 HIGD2AQ9BW72 106 aa6.63□□□□□ -1.35
PKP4-206ENST00000452162 CDK2AP2O75956 126 aa6.62□□□□□ -1.35
PKP4-206ENST00000452162 TMEM258P61165 79 aa6.62□□□□□ -1.35
PKP4-206ENST00000452162 SCXQ7RTU7 201 aa6.62□□□□□ -1.35
PKP4-206ENST00000452162 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.62□□□□□ -1.35
PKP4-206ENST00000452162 FAT1Q14517 4588 aa6.62□□□□□ -1.35
PKP4-206ENST00000452162 C4orf48Q5BLP8 95 aa6.61□□□□□ -1.35
PKP4-206ENST00000452162 SERP2Q8N6R1 65 aa6.61□□□□□ -1.35
PKP4-206ENST00000452162 SPRR4Q96PI1 79 aa6.61□□□□□ -1.35
PKP4-206ENST00000452162 NREPQ16612 68 aa6.61□□□□□ -1.35
PKP4-206ENST00000452162 KRTAP17-1Q9BYP8 105 aa6.6□□□□□ -1.35
PKP4-206ENST00000452162 IGLV8-61A0A075B6I0 122 aa6.6□□□□□ -1.35
PKP4-206ENST00000452162 F8WEM9 126 aa6.6□□□□□ -1.35
PKP4-206ENST00000452162 BCE1O60756 84 aa6.59□□□□□ -1.35
PKP4-206ENST00000452162 SPRR1BP22528 89 aa6.59□□□□□ -1.35
PKP4-206ENST00000452162 Q6ZSA8 131 aa6.59□□□□□ -1.35
PKP4-206ENST00000452162 KRTAP13-1Q8IUC0 172 aa6.59□□□□□ -1.35
PKP4-206ENST00000452162 CYSTM1Q9H1C7 97 aa6.59□□□□□ -1.35
PKP4-206ENST00000452162 UBE2AP49459 152 aa6.58□□□□□ -1.36
PKP4-206ENST00000452162 IGFL1Q6UW32 110 aa6.58□□□□□ -1.36
PKP4-206ENST00000452162 A0A0U1RQV1 116 aa6.57□□□□□ -1.36
PKP4-206ENST00000452162 LCE2DQ5TA82 110 aaPredicted RBP6.57□□□□□ -1.36
PKP4-206ENST00000452162 BPY2O14599 106 aa6.57□□□□□ -1.36
PKP4-206ENST00000452162 IGKV4-1P06312 121 aa6.57□□□□□ -1.36
PKP4-206ENST00000452162 A0A0G2JQZ4 141 aa6.56□□□□□ -1.36
PKP4-206ENST00000452162 Q8N9L7 120 aa6.55□□□□□ -1.36
PKP4-206ENST00000452162 SMR3BP02814 79 aaPredicted RBP6.55□□□□□ -1.36
PKP4-206ENST00000452162 CIRBP-AS1Q8TBR5 109 aa6.54□□□□□ -1.36
PKP4-206ENST00000452162 PLAC8Q9NZF1 115 aa6.54□□□□□ -1.36
PKP4-206ENST00000452162 TRAV7A0A075B6U4 112 aa6.53□□□□□ -1.36
PKP4-206ENST00000452162 KRTAP4-5Q9BYR2 181 aa6.53□□□□□ -1.36
PKP4-206ENST00000452162 Q8N1X5 172 aa6.52□□□□□ -1.37
PKP4-206ENST00000452162 SRRM2Q9UQ35 2752 aaKnown RBP6.52□□□□□ -1.37
PKP4-206ENST00000452162 VPS13BQ7Z7G8 4022 aa6.51□□□□□ -1.37
PKP4-206ENST00000452162 PSORS1C2Q9UIG4 136 aa6.5□□□□□ -1.37
PKP4-206ENST00000452162 ABCA13Q86UQ4 5058 aa6.5□□□□□ -1.37
PKP4-206ENST00000452162 DSCR10P59022 87 aa6.5□□□□□ -1.37
PKP4-206ENST00000452162 PMAIP1Q13794 54 aa6.5□□□□□ -1.37
PKP4-206ENST00000452162 BRK1Q8WUW1 75 aa6.5□□□□□ -1.37
PKP4-206ENST00000452162 CD164Q04900 197 aa6.49□□□□□ -1.37
PKP4-206ENST00000452162 A0A087WSZ3 146 aa6.49□□□□□ -1.37
PKP4-206ENST00000452162 LINC00483Q53H64 154 aa6.48□□□□□ -1.37
PKP4-206ENST00000452162 Q5VSD8 79 aa6.48□□□□□ -1.37
PKP4-206ENST00000452162 C20orf197Q8N268 126 aa6.46□□□□□ -1.37
PKP4-206ENST00000452162 FAM229AH3BQW9 127 aa6.46□□□□□ -1.38
PKP4-206ENST00000452162 K7EQZ3 153 aa6.46□□□□□ -1.38
PKP4-206ENST00000452162 ZNF861PO60384 105 aa6.45□□□□□ -1.38
PKP4-206ENST00000452162 OCR1Q9BZK8 76 aa6.45□□□□□ -1.38
PKP4-206ENST00000452162 ZNF706Q9Y5V0 76 aaPredicted RBP6.45□□□□□ -1.38
PKP4-206ENST00000452162 PCLOQ9Y6V0 5065 aa6.45□□□□□ -1.38
PKP4-206ENST00000452162 FLG2Q5D862 2391 aaPredicted RBP6.43□□□□□ -1.38
PKP4-206ENST00000452162 SERP1Q9Y6X1 66 aa6.43□□□□□ -1.38
PKP4-206ENST00000452162 KLKP1Q107X0 134 aa6.43□□□□□ -1.38
PKP4-206ENST00000452162 DEFB116Q30KQ4 102 aa6.43□□□□□ -1.38
PKP4-206ENST00000452162 FP248Q71RG6 208 aaPredicted RBP6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 107.3 ms