RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, human

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX3-209	ENST00000451859	ASB16-AS1	Q495Z4	193 aa		4.81	□□□□□ -1.64
RFX3-209	ENST00000451859	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	4.81	□□□□□ -1.64
RFX3-209	ENST00000451859	LIMD2	Q9BT23	127 aa		4.81	□□□□□ -1.64
RFX3-209	ENST00000451859	TEX49	A0A1B0GTD5	131 aa		4.8	□□□□□ -1.64
RFX3-209	ENST00000451859	C9orf92	A6NGG3	77 aa		4.8	□□□□□ -1.64
RFX3-209	ENST00000451859	SEC61B	P60468	96 aa	Known RBP	4.8	□□□□□ -1.64
RFX3-209	ENST00000451859		Q6ZVH6	145 aa		4.8	□□□□□ -1.64
RFX3-209	ENST00000451859	HIST3H2BB	Q8N257	126 aa		4.8	□□□□□ -1.64
RFX3-209	ENST00000451859		A0A0G2JQZ4	141 aa		4.79	□□□□□ -1.64
RFX3-209	ENST00000451859	TRBV7-6	A0A0J9YX20	115 aa		4.79	□□□□□ -1.64
RFX3-209	ENST00000451859	HSBP1L1	C9JCN9	74 aa		4.79	□□□□□ -1.64
RFX3-209	ENST00000451859	AKR1D1	P51857	326 aa		4.79	□□□□□ -1.64
RFX3-209	ENST00000451859	SMIM11B	Q8TCY0	68 aa		4.79	□□□□□ -1.64
RFX3-209	ENST00000451859	HIST1H2BL	Q99880	126 aa		4.79	□□□□□ -1.64
RFX3-209	ENST00000451859	KRTAP4-1	Q9BYQ7	146 aa		4.79	□□□□□ -1.64
RFX3-209	ENST00000451859	PRO1933	Q9H354	126 aa		4.79	□□□□□ -1.64
RFX3-209	ENST00000451859	TRAV13-2	A0A0B4J235	113 aa		4.78	□□□□□ -1.64
RFX3-209	ENST00000451859	S100A6	P06703	90 aa		4.77	□□□□□ -1.65
RFX3-209	ENST00000451859	LINC01547	P58512	204 aa	Predicted RBP	4.77	□□□□□ -1.65
RFX3-209	ENST00000451859	SNRPE	P62304	92 aa	Known RBP	4.77	□□□□□ -1.65
RFX3-209	ENST00000451859	SMIM29	Q86T20	159 aa		4.77	□□□□□ -1.65
RFX3-209	ENST00000451859	C12orf57	Q99622	126 aa		4.77	□□□□□ -1.65
RFX3-209	ENST00000451859	IGLV5-48	A0A075B6I7	105 aa		4.76	□□□□□ -1.65
RFX3-209	ENST00000451859		A4D1N5	150 aa		4.76	□□□□□ -1.65
RFX3-209	ENST00000451859	NHP2	Q9NX24	153 aa	Known RBP	4.76	□□□□□ -1.65
RFX3-209	ENST00000451859	SCGB1D1	O95968	90 aa		4.75	□□□□□ -1.65
RFX3-209	ENST00000451859	CD164	Q04900	197 aa		4.75	□□□□□ -1.65
RFX3-209	ENST00000451859		F8WEM9	126 aa		4.74	□□□□□ -1.65
RFX3-209	ENST00000451859	S100A1	P23297	94 aa		4.74	□□□□□ -1.65
RFX3-209	ENST00000451859	VAMP3	Q15836	100 aa		4.74	□□□□□ -1.65
RFX3-209	ENST00000451859	PCOTH	Q58A44	107 aa		4.73	□□□□□ -1.65
RFX3-209	ENST00000451859	HIST1H4G	Q99525	98 aa		4.73	□□□□□ -1.65
RFX3-209	ENST00000451859	IGLV8-61	A0A075B6I0	122 aa		4.72	□□□□□ -1.65
RFX3-209	ENST00000451859	LINC00575	Q6W349	94 aa		4.72	□□□□□ -1.65
RFX3-209	ENST00000451859		Q6ZQY7	126 aa		4.72	□□□□□ -1.65
RFX3-209	ENST00000451859	hADV29S1	A0JD25	119 aa		4.71	□□□□□ -1.66
RFX3-209	ENST00000451859	C1orf195	Q5TG92	126 aa		4.71	□□□□□ -1.66
RFX3-209	ENST00000451859	TCL1B	O95988	128 aa		4.69	□□□□□ -1.66
RFX3-209	ENST00000451859	COX8A	P10176	69 aa		4.69	□□□□□ -1.66
RFX3-209	ENST00000451859	PAM16	Q9Y3D7	125 aa		4.69	□□□□□ -1.66
RFX3-209	ENST00000451859		Q5XG85	94 aa		4.68	□□□□□ -1.66
RFX3-209	ENST00000451859	IGFL1	Q6UW32	110 aa		4.68	□□□□□ -1.66
RFX3-209	ENST00000451859	C14orf144	Q96I85	54 aa		4.68	□□□□□ -1.66
RFX3-209	ENST00000451859	SPATA45	Q537H7	98 aa		4.67	□□□□□ -1.66
RFX3-209	ENST00000451859	BVES-AS1	Q5T3Y7	98 aa		4.67	□□□□□ -1.66
RFX3-209	ENST00000451859	CLEC2B	Q92478	149 aa		4.67	□□□□□ -1.66
RFX3-209	ENST00000451859	RAB37	Q96AX2	223 aa		4.67	□□□□□ -1.66
RFX3-209	ENST00000451859	TRBV7-7	A0A0K0K1E9	115 aa		4.66	□□□□□ -1.66
RFX3-209	ENST00000451859		H3BUT2	72 aa		4.66	□□□□□ -1.66
RFX3-209	ENST00000451859	OCIAD2	Q56VL3	154 aa		4.66	□□□□□ -1.66
RFX3-209	ENST00000451859		Q6JHZ5	121 aa		4.66	□□□□□ -1.66
RFX3-209	ENST00000451859	KRTAP5-11	Q6L8G4	156 aa		4.66	□□□□□ -1.66
RFX3-209	ENST00000451859	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	4.66	□□□□□ -1.66
RFX3-209	ENST00000451859	SNHG12	Q9BXW3	62 aa		4.66	□□□□□ -1.66
RFX3-209	ENST00000451859	CFC1B	P0CG36	223 aa		4.65	□□□□□ -1.67
RFX3-209	ENST00000451859	CFC1	P0CG37	223 aa		4.65	□□□□□ -1.67
RFX3-209	ENST00000451859	RPL37	P61927	97 aa	Known RBP	4.65	□□□□□ -1.67
RFX3-209	ENST00000451859	VAMP8	Q9BV40	100 aa		4.65	□□□□□ -1.67
RFX3-209	ENST00000451859	DLEU1	O43261	78 aa		4.64	□□□□□ -1.67
RFX3-209	ENST00000451859	KRTAP19-2	Q3LHN2	52 aa		4.63	□□□□□ -1.67
RFX3-209	ENST00000451859	C2orf91	Q6ZV80	131 aa		4.63	□□□□□ -1.67
RFX3-209	ENST00000451859	PPDPFL	Q8WWR9	84 aa		4.62	□□□□□ -1.67
RFX3-209	ENST00000451859	FAM218A	Q96MZ4	157 aa		4.62	□□□□□ -1.67
RFX3-209	ENST00000451859	HIGD1B	Q9P298	99 aa		4.62	□□□□□ -1.67
RFX3-209	ENST00000451859		A0A0B4J2C4	111 aa		4.61	□□□□□ -1.67
RFX3-209	ENST00000451859	SNCG	O76070	127 aa		4.61	□□□□□ -1.67
RFX3-209	ENST00000451859	MT1H	P80294	61 aa		4.61	□□□□□ -1.67
RFX3-209	ENST00000451859	CEND1	Q8N111	149 aa		4.61	□□□□□ -1.67
RFX3-209	ENST00000451859	OBSCN-AS1	Q96MR7	158 aa		4.61	□□□□□ -1.67
RFX3-209	ENST00000451859	KRTAP23-1	A1A580	65 aa		4.6	□□□□□ -1.67
RFX3-209	ENST00000451859		H0YGX0	51 aa		4.6	□□□□□ -1.67
RFX3-209	ENST00000451859	LST1	O00453	97 aa		4.6	□□□□□ -1.67
RFX3-209	ENST00000451859	NDUFV3	P56181	108 aa	Known RBP	4.6	□□□□□ -1.67
RFX3-209	ENST00000451859	COX6B2	Q6YFQ2	88 aa		4.6	□□□□□ -1.67
RFX3-209	ENST00000451859		A0A1B0GV72	72 aa		4.59	□□□□□ -1.67
RFX3-209	ENST00000451859	FABP2	P12104	132 aa		4.59	□□□□□ -1.67
RFX3-209	ENST00000451859	FXYD2	P54710	66 aa		4.59	□□□□□ -1.67
RFX3-209	ENST00000451859	KRTAP10-7	P60409	375 aa	Predicted RBP	4.59	□□□□□ -1.67
RFX3-209	ENST00000451859	PRO1854	Q9UHT4	67 aa		4.59	□□□□□ -1.67
RFX3-209	ENST00000451859	FLG	P20930	4061 aa	Predicted RBP	4.58	□□□□□ -1.68
RFX3-209	ENST00000451859	SS18L2	Q9UHA2	77 aa		4.58	□□□□□ -1.68
RFX3-209	ENST00000451859		A0A087WSZ3	146 aa		4.57	□□□□□ -1.68
RFX3-209	ENST00000451859		H3BMG7	143 aa		4.57	□□□□□ -1.68
RFX3-209	ENST00000451859		M0R2T5	61 aa		4.57	□□□□□ -1.68
RFX3-209	ENST00000451859		Q96NJ1	140 aa		4.57	□□□□□ -1.68
RFX3-209	ENST00000451859		K7ERJ3	54 aa		4.56	□□□□□ -1.68
RFX3-209	ENST00000451859	TRIAP1	O43715	76 aa		4.56	□□□□□ -1.68
RFX3-209	ENST00000451859	ATP11AUN	Q6ZP68	121 aa		4.56	□□□□□ -1.68
RFX3-209	ENST00000451859	TEN1	Q86WV5	123 aa		4.56	□□□□□ -1.68
RFX3-209	ENST00000451859	PSMB2	P49721	201 aa		4.55	□□□□□ -1.68
RFX3-209	ENST00000451859	LCE1A	Q5T7P2	110 aa		4.55	□□□□□ -1.68
RFX3-209	ENST00000451859		Q6Q795	121 aa		4.55	□□□□□ -1.68
RFX3-209	ENST00000451859		Q75L30	129 aa		4.55	□□□□□ -1.68
RFX3-209	ENST00000451859	SIGMAR1	Q99720	223 aa		4.55	□□□□□ -1.68
RFX3-209	ENST00000451859	TMA7	Q9Y2S6	64 aa	Known RBP	4.55	□□□□□ -1.68
RFX3-209	ENST00000451859	DNAL4	O96015	105 aa		4.54	□□□□□ -1.68
RFX3-209	ENST00000451859	PYY3	Q5JQD4	70 aa		4.54	□□□□□ -1.68
RFX3-209	ENST00000451859		A0A1B0GX51	115 aa		4.53	□□□□□ -1.68
RFX3-209	ENST00000451859	KRTAP10-6	P60371	365 aa	Predicted RBP	4.53	□□□□□ -1.68
RFX3-209	ENST00000451859	HSD52	Q0P140	79 aa		4.53	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms