RNA–Protein interactions for RNA: ENST00000451154.5

USP42-204, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-204ENST00000451154 KRTAP10-6P60371 365 aaPredicted RBP14.37□□□□□ -0.11
USP42-204ENST00000451154 Q6ZQY7 126 aa14.37□□□□□ -0.11
USP42-204ENST00000451154 hADV29S1A0JD25 119 aa14.36□□□□□ -0.11
USP42-204ENST00000451154 FLGP20930 4061 aaPredicted RBP14.34□□□□□ -0.11
USP42-204ENST00000451154 M0R2T5 61 aa14.33□□□□□ -0.12
USP42-204ENST00000451154 COX6B2Q6YFQ2 88 aa14.33□□□□□ -0.12
USP42-204ENST00000451154 Q6JHZ5 121 aa14.32□□□□□ -0.12
USP42-204ENST00000451154 IGFL1Q6UW32 110 aa14.31□□□□□ -0.12
USP42-204ENST00000451154 TRBV7-7A0A0K0K1E9 115 aa14.3□□□□□ -0.12
USP42-204ENST00000451154 OCIAD2Q56VL3 154 aa14.3□□□□□ -0.12
USP42-204ENST00000451154 HIST3H2BBQ8N257 126 aa14.29□□□□□ -0.12
USP42-204ENST00000451154 CLEC2BQ92478 149 aa14.29□□□□□ -0.12
USP42-204ENST00000451154 HSBP1L1C9JCN9 74 aa14.28□□□□□ -0.12
USP42-204ENST00000451154 HIST1H2BLQ99880 126 aa14.28□□□□□ -0.12
USP42-204ENST00000451154 S100A2P29034 98 aa14.25□□□□□ -0.13
USP42-204ENST00000451154 C12orf57Q99622 126 aa14.24□□□□□ -0.13
USP42-204ENST00000451154 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.23□□□□□ -0.13
USP42-204ENST00000451154 OBSCN-AS1Q96MR7 158 aa14.22□□□□□ -0.13
USP42-204ENST00000451154 SNHG12Q9BXW3 62 aa14.2□□□□□ -0.14
USP42-204ENST00000451154 H3BUT2 72 aa14.17□□□□□ -0.14
USP42-204ENST00000451154 BVES-AS1Q5T3Y7 98 aa14.17□□□□□ -0.14
USP42-204ENST00000451154 ATP11AUNQ6ZP68 121 aa14.17□□□□□ -0.14
USP42-204ENST00000451154 HIST1H4GQ99525 98 aa14.17□□□□□ -0.14
USP42-204ENST00000451154 Q75L30 129 aa14.15□□□□□ -0.14
USP42-204ENST00000451154 PPDPFLQ8WWR9 84 aa14.15□□□□□ -0.14
USP42-204ENST00000451154 LST1O00453 97 aa14.13□□□□□ -0.15
USP42-204ENST00000451154 Q6Q795 121 aa14.13□□□□□ -0.15
USP42-204ENST00000451154 SCGB1D1O95968 90 aa14.1□□□□□ -0.15
USP42-204ENST00000451154 Q96NJ1 140 aa14.08□□□□□ -0.16
USP42-204ENST00000451154 S100A6P06703 90 aa14.07□□□□□ -0.16
USP42-204ENST00000451154 COX8AP10176 69 aa14.07□□□□□ -0.16
USP42-204ENST00000451154 CFC1P0CG37 223 aa14.05□□□□□ -0.16
USP42-204ENST00000451154 RAB37Q96AX2 223 aa14□□□□□ -0.17
USP42-204ENST00000451154 DLEU1O43261 78 aa13.99□□□□□ -0.17
USP42-204ENST00000451154 FAM218AQ96MZ4 157 aa13.99□□□□□ -0.17
USP42-204ENST00000451154 SS18L2Q9UHA2 77 aa13.99□□□□□ -0.17
USP42-204ENST00000451154 NDUFV3P56181 108 aaKnown RBP13.98□□□□□ -0.17
USP42-204ENST00000451154 H0YGX0 51 aa13.97□□□□□ -0.17
USP42-204ENST00000451154 SNCGO76070 127 aa13.97□□□□□ -0.17
USP42-204ENST00000451154 TEN1Q86WV5 123 aa13.97□□□□□ -0.17
USP42-204ENST00000451154 C14orf144Q96I85 54 aa13.97□□□□□ -0.17
USP42-204ENST00000451154 C20orf166-AS1Q96NR2 134 aa13.95□□□□□ -0.18
USP42-204ENST00000451154 A0A087WSZ3 146 aa13.93□□□□□ -0.18
USP42-204ENST00000451154 A8MUU9 505 aa13.92□□□□□ -0.18
USP42-204ENST00000451154 A0A0B4J2C4 111 aa13.91□□□□□ -0.18
USP42-204ENST00000451154 H3BMG7 143 aa13.9□□□□□ -0.18
USP42-204ENST00000451154 HIGD1BQ9P298 99 aa13.9□□□□□ -0.18
USP42-204ENST00000451154 FABP2P12104 132 aa13.87□□□□□ -0.19
USP42-204ENST00000451154 S100A1P23297 94 aa13.87□□□□□ -0.19
USP42-204ENST00000451154 PAM16Q9Y3D7 125 aa13.87□□□□□ -0.19
USP42-204ENST00000451154 DSCR10P59022 87 aa13.86□□□□□ -0.19
USP42-204ENST00000451154 SPATA45Q537H7 98 aa13.85□□□□□ -0.19
USP42-204ENST00000451154 C2orf91Q6ZV80 131 aa13.84□□□□□ -0.19
USP42-204ENST00000451154 TRBV20-1A0A075B6N2 111 aa13.81□□□□□ -0.2
USP42-204ENST00000451154 A0A1W2PNM2 257 aa13.81□□□□□ -0.2
USP42-204ENST00000451154 PRO1854Q9UHT4 67 aa13.81□□□□□ -0.2
USP42-204ENST00000451154 A0A1B0GX51 115 aa13.8□□□□□ -0.2
USP42-204ENST00000451154 CEND1Q8N111 149 aa13.8□□□□□ -0.2
USP42-204ENST00000451154 GHRHP01286 108 aa13.79□□□□□ -0.2
USP42-204ENST00000451154 KRTAP9-8Q9BYQ0 159 aa13.79□□□□□ -0.2
USP42-204ENST00000451154 SIGMAR1Q99720 223 aa13.77□□□□□ -0.21
USP42-204ENST00000451154 VAMP8Q9BV40 100 aa13.76□□□□□ -0.21
USP42-204ENST00000451154 KRTAP16-1A8MUX0 517 aa13.74□□□□□ -0.21
USP42-204ENST00000451154 TRIAP1O43715 76 aa13.74□□□□□ -0.21
USP42-204ENST00000451154 USH2AO75445 5202 aa13.73□□□□□ -0.21
USP42-204ENST00000451154 FXYD2P54710 66 aa13.73□□□□□ -0.21
USP42-204ENST00000451154 LINC00313P59037 77 aa13.73□□□□□ -0.21
USP42-204ENST00000451154 TMEM238LA0A1B0GVL6 79 aa13.72□□□□□ -0.21
USP42-204ENST00000451154 A6NJY4 79 aa13.72□□□□□ -0.21
USP42-204ENST00000451154 IGKV4-1P06312 121 aa13.71□□□□□ -0.21
USP42-204ENST00000451154 ANKRD29Q8N6D5 301 aa13.71□□□□□ -0.21
USP42-204ENST00000451154 A0A1B0GV72 72 aa13.7□□□□□ -0.22
USP42-204ENST00000451154 NOTCH2NLQ7Z3S9 236 aa13.67□□□□□ -0.22
USP42-204ENST00000451154 SSPOA2VEC9 5147 aa13.67□□□□□ -0.22
USP42-204ENST00000451154 TRBV7-4A0A0J9YYF1 115 aa13.66□□□□□ -0.22
USP42-204ENST00000451154 DEFB116Q30KQ4 102 aa13.65□□□□□ -0.22
USP42-204ENST00000451154 ORMDL1Q9P0S3 153 aa13.65□□□□□ -0.22
USP42-204ENST00000451154 DNAL4O96015 105 aa13.63□□□□□ -0.23
USP42-204ENST00000451154 FAM236DA0A1B0GTK5 79 aa13.62□□□□□ -0.23
USP42-204ENST00000451154 FAM236CP0DP71 79 aa13.62□□□□□ -0.23
USP42-204ENST00000451154 PSMB2P49721 201 aa13.6□□□□□ -0.23
USP42-204ENST00000451154 LINC00472Q9H8W2 130 aa13.59□□□□□ -0.23
USP42-204ENST00000451154 H3BQ85 93 aa13.58□□□□□ -0.24
USP42-204ENST00000451154 TMEM256-PLSCR3K7ERE1 68 aa13.57□□□□□ -0.24
USP42-204ENST00000451154 K7ERJ3 54 aa13.57□□□□□ -0.24
USP42-204ENST00000451154 CCKP06307 115 aa13.56□□□□□ -0.24
USP42-204ENST00000451154 IGHV6-1A0A0B4J1U7 121 aa13.55□□□□□ -0.24
USP42-204ENST00000451154 MT2AP02795 61 aa13.55□□□□□ -0.24
USP42-204ENST00000451154 HRES1P13985 223 aa13.55□□□□□ -0.24
USP42-204ENST00000451154 MPLKIPQ8TAP9 179 aa13.54□□□□□ -0.24
USP42-204ENST00000451154 TRACP01848 142 aa13.53□□□□□ -0.24
USP42-204ENST00000451154 RBM12B-AS1Q9P1G2 102 aa13.53□□□□□ -0.24
USP42-204ENST00000451154 COX6CP09669 75 aa13.51□□□□□ -0.25
USP42-204ENST00000451154 HSD52Q0P140 79 aa13.51□□□□□ -0.25
USP42-204ENST00000451154 KRTAP9-1A8MXZ3 250 aaPredicted RBP13.5□□□□□ -0.25
USP42-204ENST00000451154 UBE2V1Q13404 147 aa13.47□□□□□ -0.25
USP42-204ENST00000451154 MT1FP04733 61 aa13.45□□□□□ -0.26
USP42-204ENST00000451154 VPS25Q9BRG1 176 aa13.45□□□□□ -0.26
USP42-204ENST00000451154 KRTAP9-7A8MTY7 169 aa13.42□□□□□ -0.26
USP42-204ENST00000451154 PYY3Q5JQD4 70 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms