RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 IGLV8-61A0A075B6I0 122 aa3.68□□□□□ -1.82
CDC42BPA-209ENST00000448940 IGLV6-57P01721 117 aa3.68□□□□□ -1.82
CDC42BPA-209ENST00000448940 KRTAP16-1A8MUX0 517 aa3.68□□□□□ -1.82
CDC42BPA-209ENST00000448940 AMELXQ99217 191 aa3.68□□□□□ -1.82
CDC42BPA-209ENST00000448940 RPS28P62857 69 aaKnown RBP3.67□□□□□ -1.82
CDC42BPA-209ENST00000448940 PLAC4Q8WY50 150 aa3.67□□□□□ -1.82
CDC42BPA-209ENST00000448940 KRTAP10-1P60331 282 aa3.67□□□□□ -1.82
CDC42BPA-209ENST00000448940 KRTAP10-2P60368 255 aa3.66□□□□□ -1.82
CDC42BPA-209ENST00000448940 PKD1L1Q8TDX9 2849 aa3.66□□□□□ -1.82
CDC42BPA-209ENST00000448940 TP73-AS1Q9UF72 201 aa3.66□□□□□ -1.82
CDC42BPA-209ENST00000448940 TENM3Q9P273 2699 aa3.66□□□□□ -1.82
CDC42BPA-209ENST00000448940 NBEAL2Q6ZNJ1 2754 aa3.66□□□□□ -1.82
CDC42BPA-209ENST00000448940 LRBAP50851 2863 aa3.66□□□□□ -1.82
CDC42BPA-209ENST00000448940 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.66□□□□□ -1.82
CDC42BPA-209ENST00000448940 NF1P21359 2839 aa3.66□□□□□ -1.82
CDC42BPA-209ENST00000448940 Q6ZR54 194 aa3.65□□□□□ -1.82
CDC42BPA-209ENST00000448940 ANAPC11Q9NYG5 84 aa3.65□□□□□ -1.82
CDC42BPA-209ENST00000448940 NDUFAF8A1L188 74 aa3.65□□□□□ -1.82
CDC42BPA-209ENST00000448940 SPTBN5Q9NRC6 3674 aaKnown RBP3.65□□□□□ -1.83
CDC42BPA-209ENST00000448940 OBSCN-AS1Q96MR7 158 aa3.65□□□□□ -1.83
CDC42BPA-209ENST00000448940 ZANQ9Y493 2812 aa3.65□□□□□ -1.83
CDC42BPA-209ENST00000448940 PRR3P79522 188 aaKnown RBP3.64□□□□□ -1.83
CDC42BPA-209ENST00000448940 C9orf129Q5T035 196 aaKnown RBP3.64□□□□□ -1.83
CDC42BPA-209ENST00000448940 FAM168BA1KXE4 195 aa3.63□□□□□ -1.83
CDC42BPA-209ENST00000448940 A0A087WSZ3 146 aa3.63□□□□□ -1.83
CDC42BPA-209ENST00000448940 PRO0461Q9UI25 63 aa3.63□□□□□ -1.83
CDC42BPA-209ENST00000448940 FXYD2P54710 66 aa3.63□□□□□ -1.83
CDC42BPA-209ENST00000448940 C10orf91Q5T1B1 145 aa3.63□□□□□ -1.83
CDC42BPA-209ENST00000448940 LINC00575Q6W349 94 aa3.63□□□□□ -1.83
CDC42BPA-209ENST00000448940 CELSR2Q9HCU4 2923 aa3.63□□□□□ -1.83
CDC42BPA-209ENST00000448940 DEFB116Q30KQ4 102 aa3.63□□□□□ -1.83
CDC42BPA-209ENST00000448940 C15orf56Q8N910 161 aa3.63□□□□□ -1.83
CDC42BPA-209ENST00000448940 ASPMQ8IZT6 3477 aa3.62□□□□□ -1.83
CDC42BPA-209ENST00000448940 H0Y9P7 68 aa3.62□□□□□ -1.83
CDC42BPA-209ENST00000448940 HIGD1BQ9P298 99 aa3.62□□□□□ -1.83
CDC42BPA-209ENST00000448940 H3BPC8 53 aa3.62□□□□□ -1.83
CDC42BPA-209ENST00000448940 PRAC1Q96KF2 57 aa3.61□□□□□ -1.83
CDC42BPA-209ENST00000448940 CYP4F30PQ9H0H9 118 aa3.61□□□□□ -1.83
CDC42BPA-209ENST00000448940 C2orf91Q6ZV80 131 aa3.61□□□□□ -1.83
CDC42BPA-209ENST00000448940 DCHS2Q6V1P9 2916 aa3.61□□□□□ -1.83
CDC42BPA-209ENST00000448940 LINC01600Q96MT4 127 aa3.6□□□□□ -1.83
CDC42BPA-209ENST00000448940 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.6□□□□□ -1.83
CDC42BPA-209ENST00000448940 KRTAP1-5Q9BYS1 174 aa3.6□□□□□ -1.83
CDC42BPA-209ENST00000448940 SMIM11BQ8TCY0 68 aa3.59□□□□□ -1.83
CDC42BPA-209ENST00000448940 UQCR11O14957 56 aa3.59□□□□□ -1.83
CDC42BPA-209ENST00000448940 TLX1NBP0CAT3 122 aa3.59□□□□□ -1.83
CDC42BPA-209ENST00000448940 FBN3Q75N90 2809 aa3.59□□□□□ -1.84
CDC42BPA-209ENST00000448940 PLAC8Q9NZF1 115 aa3.58□□□□□ -1.84
CDC42BPA-209ENST00000448940 Q6ZRX8 168 aa3.58□□□□□ -1.84
CDC42BPA-209ENST00000448940 ST20-AS1Q8NBB2 130 aa3.58□□□□□ -1.84
CDC42BPA-209ENST00000448940 ADGRG4Q8IZF6 3080 aa3.58□□□□□ -1.84
CDC42BPA-209ENST00000448940 A0A1W2PNN7 141 aa3.58□□□□□ -1.84
CDC42BPA-209ENST00000448940 TSPEAR-AS2P59090 65 aa3.58□□□□□ -1.84
CDC42BPA-209ENST00000448940 PRR15Q8IV56 129 aa3.58□□□□□ -1.84
CDC42BPA-209ENST00000448940 A0A1B0GW54 56 aa3.57□□□□□ -1.84
CDC42BPA-209ENST00000448940 C1orf64Q8NEQ6 169 aa3.57□□□□□ -1.84
CDC42BPA-209ENST00000448940 DCHS1Q96JQ0 3298 aa3.57□□□□□ -1.84
CDC42BPA-209ENST00000448940 ELOF1P60002 83 aaKnown RBP3.56□□□□□ -1.84
CDC42BPA-209ENST00000448940 MIR22HGQ0VDD5 57 aa3.56□□□□□ -1.84
CDC42BPA-209ENST00000448940 FBN2P35556 2912 aa3.56□□□□□ -1.84
CDC42BPA-209ENST00000448940 A8MUN3 132 aa3.56□□□□□ -1.84
CDC42BPA-209ENST00000448940 LOC400499M0QZD8 3231 aa3.54□□□□□ -1.84
CDC42BPA-209ENST00000448940 FAM229BQ4G0N7 80 aa3.54□□□□□ -1.84
CDC42BPA-209ENST00000448940 OTOGQ6ZRI0 2925 aa3.53□□□□□ -1.84
CDC42BPA-209ENST00000448940 TGP01266 2768 aa3.53□□□□□ -1.84
CDC42BPA-209ENST00000448940 DSCR10P59022 87 aa3.53□□□□□ -1.85
CDC42BPA-209ENST00000448940 Q1T7F1 81 aa3.52□□□□□ -1.85
CDC42BPA-209ENST00000448940 DMAC1Q96GE9 116 aa3.52□□□□□ -1.85
CDC42BPA-209ENST00000448940 LOC101927531A0A1B0GV80 90 aa3.52□□□□□ -1.85
CDC42BPA-209ENST00000448940 SPRR4Q96PI1 79 aa3.52□□□□□ -1.85
CDC42BPA-209ENST00000448940 OCR1Q9BZK8 76 aa3.52□□□□□ -1.85
CDC42BPA-209ENST00000448940 KCNQ1DNQ9H478 68 aa3.51□□□□□ -1.85
CDC42BPA-209ENST00000448940 ADAMTSL4-AS1Q5T5F5 129 aa3.51□□□□□ -1.85
CDC42BPA-209ENST00000448940 VWFP04275 2813 aa3.51□□□□□ -1.85
CDC42BPA-209ENST00000448940 SPINK7P58062 85 aa3.5□□□□□ -1.85
CDC42BPA-209ENST00000448940 PDZD2O15018 2839 aa3.5□□□□□ -1.85
CDC42BPA-209ENST00000448940 MYO15AQ9UKN7 3530 aa3.5□□□□□ -1.85
CDC42BPA-209ENST00000448940 FP248Q71RG6 208 aaPredicted RBP3.49□□□□□ -1.85
CDC42BPA-209ENST00000448940 LITAFQ99732 161 aa3.49□□□□□ -1.85
CDC42BPA-209ENST00000448940 CELSR1Q9NYQ6 3014 aa3.49□□□□□ -1.85
CDC42BPA-209ENST00000448940 IGFL1Q6UW32 110 aa3.48□□□□□ -1.85
CDC42BPA-209ENST00000448940 SMIM29Q86T20 159 aa3.48□□□□□ -1.85
CDC42BPA-209ENST00000448940 A0A096LNJ9 63 aa3.47□□□□□ -1.85
CDC42BPA-209ENST00000448940 HRES1P13985 223 aa3.47□□□□□ -1.85
CDC42BPA-209ENST00000448940 Q6ZRN7 208 aaPredicted RBP3.47□□□□□ -1.85
CDC42BPA-209ENST00000448940 URB1-AS1Q96HZ7 61 aa3.46□□□□□ -1.85
CDC42BPA-209ENST00000448940 A0A0D9SG42 100 aa3.46□□□□□ -1.86
CDC42BPA-209ENST00000448940 Q6ZQT0 140 aa3.46□□□□□ -1.86
CDC42BPA-209ENST00000448940 TP53AIP1Q9HCN2 124 aa3.45□□□□□ -1.86
CDC42BPA-209ENST00000448940 COA5Q86WW8 74 aa3.44□□□□□ -1.86
CDC42BPA-209ENST00000448940 LINC01546A6NGU7 62 aa3.44□□□□□ -1.86
CDC42BPA-209ENST00000448940 IGLV5-48A0A075B6I7 105 aa3.43□□□□□ -1.86
CDC42BPA-209ENST00000448940 ROMO1P60602 79 aa3.42□□□□□ -1.86
CDC42BPA-209ENST00000448940 HRNRQ86YZ3 2850 aaPredicted RBP3.42□□□□□ -1.86
CDC42BPA-209ENST00000448940 H1FX-AS1Q4G0G2 97 aa3.42□□□□□ -1.86
CDC42BPA-209ENST00000448940 CSAG1Q6PB30 78 aa3.42□□□□□ -1.86
CDC42BPA-209ENST00000448940 SRRM2Q9UQ35 2752 aaKnown RBP3.41□□□□□ -1.86
CDC42BPA-209ENST00000448940 COL7A1Q02388 2944 aa3.41□□□□□ -1.86
CDC42BPA-209ENST00000448940 MUC3AQ02505 3323 aa3.41□□□□□ -1.86
CDC42BPA-209ENST00000448940 TRBV7-4A0A0J9YYF1 115 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms