RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 REG3GQ6UW15 175 aa6.71□□□□□ -1.34
LINC00342-202ENST00000448494 IGFL1Q6UW32 110 aa6.71□□□□□ -1.34
LINC00342-202ENST00000448494 C4orf3Q8WVX3 66 aa6.71□□□□□ -1.34
LINC00342-202ENST00000448494 FBN3Q75N90 2809 aa6.71□□□□□ -1.34
LINC00342-202ENST00000448494 ANKHD1Q8IWZ3 2542 aaKnown RBP6.71□□□□□ -1.34
LINC00342-202ENST00000448494 A0A087WSZ3 146 aa6.71□□□□□ -1.34
LINC00342-202ENST00000448494 DEFB130BP0DP73 79 aa6.71□□□□□ -1.34
LINC00342-202ENST00000448494 DEFB130AP0DP74 79 aa6.71□□□□□ -1.34
LINC00342-202ENST00000448494 MIR22HGQ0VDD5 57 aa6.71□□□□□ -1.34
LINC00342-202ENST00000448494 A0A0A0MQY5 61 aa6.69□□□□□ -1.34
LINC00342-202ENST00000448494 IGKV2-24A0A0C4DH68 120 aa6.69□□□□□ -1.34
LINC00342-202ENST00000448494 SPRR1AP35321 89 aa6.69□□□□□ -1.34
LINC00342-202ENST00000448494 IGLV8-61A0A075B6I0 122 aa6.69□□□□□ -1.34
LINC00342-202ENST00000448494 MMP24-AS1A0A0U1RRL7 71 aa6.68□□□□□ -1.34
LINC00342-202ENST00000448494 NOTCH2NLQ7Z3S9 236 aa6.68□□□□□ -1.34
LINC00342-202ENST00000448494 SVEP1Q4LDE5 3571 aa6.67□□□□□ -1.34
LINC00342-202ENST00000448494 A0A1W2PPR1 153 aa6.67□□□□□ -1.34
LINC00342-202ENST00000448494 UQCR11O14957 56 aa6.67□□□□□ -1.34
LINC00342-202ENST00000448494 ABCA2Q9BZC7 2435 aa6.67□□□□□ -1.34
LINC00342-202ENST00000448494 CCDC168Q8NDH2 2452 aa6.67□□□□□ -1.34
LINC00342-202ENST00000448494 A0A1B0GU69 56 aa6.67□□□□□ -1.34
LINC00342-202ENST00000448494 MTORP42345 2549 aa6.67□□□□□ -1.34
LINC00342-202ENST00000448494 ZNF861PO60384 105 aa6.66□□□□□ -1.34
LINC00342-202ENST00000448494 C19orf73Q9NVV2 129 aa6.66□□□□□ -1.34
LINC00342-202ENST00000448494 LINC00472Q9H8W2 130 aa6.65□□□□□ -1.34
LINC00342-202ENST00000448494 PLA2G2DQ9UNK4 145 aa6.65□□□□□ -1.35
LINC00342-202ENST00000448494 MSMBP08118 114 aa6.64□□□□□ -1.35
LINC00342-202ENST00000448494 LELP1Q5T871 98 aa6.64□□□□□ -1.35
LINC00342-202ENST00000448494 ACYP2P14621 99 aa6.62□□□□□ -1.35
LINC00342-202ENST00000448494 KRTAP25-1Q3LHN0 102 aa6.62□□□□□ -1.35
LINC00342-202ENST00000448494 NOTCH3Q9UM47 2321 aa6.62□□□□□ -1.35
LINC00342-202ENST00000448494 MAP1AP78559 2803 aaPredicted RBP6.62□□□□□ -1.35
LINC00342-202ENST00000448494 SPG11Q96JI7 2443 aa6.61□□□□□ -1.35
LINC00342-202ENST00000448494 A0A0G2JQZ4 141 aa6.61□□□□□ -1.35
LINC00342-202ENST00000448494 A0A1W2PNN7 141 aa6.61□□□□□ -1.35
LINC00342-202ENST00000448494 RPL37AP8A6NKH3 93 aa6.6□□□□□ -1.35
LINC00342-202ENST00000448494 C15orf56Q8N910 161 aa6.58□□□□□ -1.36
LINC00342-202ENST00000448494 HRNRQ86YZ3 2850 aaPredicted RBP6.58□□□□□ -1.36
LINC00342-202ENST00000448494 NIPBLQ6KC79 2804 aaeCLIP6.57□□□□□ -1.36
LINC00342-202ENST00000448494 ZNF469Q96JG9 3925 aaPredicted RBP6.57□□□□□ -1.36
LINC00342-202ENST00000448494 KRTAP26-1Q6PEX3 210 aa6.57□□□□□ -1.36
LINC00342-202ENST00000448494 ALMS1Q8TCU4 4167 aa6.55□□□□□ -1.36
LINC00342-202ENST00000448494 FAM168BA1KXE4 195 aa6.55□□□□□ -1.36
LINC00342-202ENST00000448494 P0C880 135 aa6.55□□□□□ -1.36
LINC00342-202ENST00000448494 TLX1NBP0CAT3 122 aa6.55□□□□□ -1.36
LINC00342-202ENST00000448494 Q6YL49 198 aa6.54□□□□□ -1.36
LINC00342-202ENST00000448494 X6R8D5 127 aa6.54□□□□□ -1.36
LINC00342-202ENST00000448494 SMR3AQ99954 134 aa6.53□□□□□ -1.36
LINC00342-202ENST00000448494 ACANP16112 2415 aa6.53□□□□□ -1.36
LINC00342-202ENST00000448494 DMAC1Q96GE9 116 aa6.52□□□□□ -1.37
LINC00342-202ENST00000448494 C8orf17Q9NRJ1 99 aa6.51□□□□□ -1.37
LINC00342-202ENST00000448494 IGLV5-52A0A0A0MRZ9 124 aa6.5□□□□□ -1.37
LINC00342-202ENST00000448494 CCL19Q99731 98 aa6.5□□□□□ -1.37
LINC00342-202ENST00000448494 LINC00483Q53H64 154 aa6.49□□□□□ -1.37
LINC00342-202ENST00000448494 FN1P02751 2386 aaKnown RBP6.49□□□□□ -1.37
LINC00342-202ENST00000448494 KRTAP1-3Q8IUG1 177 aa6.49□□□□□ -1.37
LINC00342-202ENST00000448494 FLNAP21333 2647 aaKnown RBP6.48□□□□□ -1.37
LINC00342-202ENST00000448494 NSD1Q96L73 2696 aaPredicted RBP6.48□□□□□ -1.37
LINC00342-202ENST00000448494 DEFB113Q30KQ7 82 aa6.48□□□□□ -1.37
LINC00342-202ENST00000448494 MRPL34Q9BQ48 92 aaKnown RBP6.46□□□□□ -1.37
LINC00342-202ENST00000448494 CSPG4Q6UVK1 2322 aa6.46□□□□□ -1.38
LINC00342-202ENST00000448494 A8MUU9 505 aa6.46□□□□□ -1.38
LINC00342-202ENST00000448494 IGLV7-43P04211 117 aa6.45□□□□□ -1.38
LINC00342-202ENST00000448494 SPRR1BP22528 89 aa6.45□□□□□ -1.38
LINC00342-202ENST00000448494 KRTAP7-1Q8IUC3 87 aa6.45□□□□□ -1.38
LINC00342-202ENST00000448494 FBN1P35555 2871 aaKnown RBP6.44□□□□□ -1.38
LINC00342-202ENST00000448494 INAFM1C9JVW0 142 aa6.43□□□□□ -1.38
LINC00342-202ENST00000448494 Q96NJ1 140 aa6.42□□□□□ -1.38
LINC00342-202ENST00000448494 JMJD1CQ15652 2540 aa6.42□□□□□ -1.38
LINC00342-202ENST00000448494 ANK3Q12955 4377 aaKnown RBP6.42□□□□□ -1.38
LINC00342-202ENST00000448494 A0A1B0GVX0 72 aa6.42□□□□□ -1.38
LINC00342-202ENST00000448494 KRTAP16-1A8MUX0 517 aa6.41□□□□□ -1.38
LINC00342-202ENST00000448494 VPS13CQ709C8 3753 aa6.41□□□□□ -1.38
LINC00342-202ENST00000448494 KRTAP13-3Q3SY46 172 aa6.4□□□□□ -1.38
LINC00342-202ENST00000448494 COL6A5A8TX70 2615 aa6.4□□□□□ -1.38
LINC00342-202ENST00000448494 LINC00304Q8N9R0 145 aa6.38□□□□□ -1.39
LINC00342-202ENST00000448494 STAB1Q9NY15 2570 aa6.38□□□□□ -1.39
LINC00342-202ENST00000448494 DNAH10OSP0CZ25 163 aa6.38□□□□□ -1.39
LINC00342-202ENST00000448494 PRLHP81277 87 aa6.37□□□□□ -1.39
LINC00342-202ENST00000448494 HIVEP2P31629 2446 aa6.36□□□□□ -1.39
LINC00342-202ENST00000448494 HTN3P15516 51 aa6.36□□□□□ -1.39
LINC00342-202ENST00000448494 KRTAP1-1Q07627 177 aa6.36□□□□□ -1.39
LINC00342-202ENST00000448494 DEFB4AO15263 64 aa6.36□□□□□ -1.39
LINC00342-202ENST00000448494 K7EIL1 84 aa6.35□□□□□ -1.39
LINC00342-202ENST00000448494 CDK2AP2O75956 126 aa6.35□□□□□ -1.39
LINC00342-202ENST00000448494 ATRQ13535 2644 aa6.35□□□□□ -1.39
LINC00342-202ENST00000448494 SPART-AS1P0CW21 52 aa6.35□□□□□ -1.39
LINC00342-202ENST00000448494 Q5W150 140 aa6.35□□□□□ -1.39
LINC00342-202ENST00000448494 C20orf166-AS1Q96NR2 134 aa6.35□□□□□ -1.39
LINC00342-202ENST00000448494 MXRA5Q9NR99 2828 aa6.34□□□□□ -1.4
LINC00342-202ENST00000448494 ANK2Q01484 3957 aa6.34□□□□□ -1.4
LINC00342-202ENST00000448494 NBEAL1Q6ZS30 2694 aa6.33□□□□□ -1.4
LINC00342-202ENST00000448494 CASC10Q5T4H9 136 aa6.33□□□□□ -1.4
LINC00342-202ENST00000448494 NUPR2A6NF83 97 aa6.32□□□□□ -1.4
LINC00342-202ENST00000448494 H3BNG1 76 aa6.31□□□□□ -1.4
LINC00342-202ENST00000448494 TLN2Q9Y4G6 2542 aa6.31□□□□□ -1.4
LINC00342-202ENST00000448494 KRTAP24-1Q3LI83 254 aa6.31□□□□□ -1.4
LINC00342-202ENST00000448494 LINC01556Q5JQF7 62 aa6.3□□□□□ -1.4
LINC00342-202ENST00000448494 TENM2Q9NT68 2774 aa6.3□□□□□ -1.4
LINC00342-202ENST00000448494 NDUFAF8A1L188 74 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms