RNA–Protein interactions for RNA: ENST00000446716.5

ATG9A-215, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 5,245 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-215ENST00000446716 KRTAP1-5Q9BYS1 174 aa11.07□□□□□ -0.64
ATG9A-215ENST00000446716 KLKP1Q107X0 134 aa11.07□□□□□ -0.64
ATG9A-215ENST00000446716 A8MUN3 132 aa11.04□□□□□ -0.64
ATG9A-215ENST00000446716 LINC01554Q52M75 96 aa11.02□□□□□ -0.64
ATG9A-215ENST00000446716 CYP4F30PQ9H0H9 118 aa11.02□□□□□ -0.64
ATG9A-215ENST00000446716 LAMA2P24043 3122 aaKnown RBP10.99□□□□□ -0.65
ATG9A-215ENST00000446716 NSD1Q96L73 2696 aaPredicted RBP10.99□□□□□ -0.65
ATG9A-215ENST00000446716 M0R2T5 61 aa10.97□□□□□ -0.65
ATG9A-215ENST00000446716 Q5VSD8 79 aa10.97□□□□□ -0.65
ATG9A-215ENST00000446716 SPRR1AP35321 89 aa10.96□□□□□ -0.65
ATG9A-215ENST00000446716 MIR22HGQ0VDD5 57 aa10.95□□□□□ -0.66
ATG9A-215ENST00000446716 KRTAP10-1P60331 282 aa10.94□□□□□ -0.66
ATG9A-215ENST00000446716 Q8NDZ9 215 aa10.93□□□□□ -0.66
ATG9A-215ENST00000446716 STAB2Q8WWQ8 2551 aa10.92□□□□□ -0.66
ATG9A-215ENST00000446716 KRTAP10-2P60368 255 aa10.92□□□□□ -0.66
ATG9A-215ENST00000446716 H7BZZ5 65 aa10.91□□□□□ -0.66
ATG9A-215ENST00000446716 XIRP2A4UGR9 3374 aa10.9□□□□□ -0.67
ATG9A-215ENST00000446716 ITPR2Q14571 2701 aa10.89□□□□□ -0.67
ATG9A-215ENST00000446716 SPANXA2-OT1Q8N9U9 137 aa10.89□□□□□ -0.67
ATG9A-215ENST00000446716 NBEAL2Q6ZNJ1 2754 aa10.89□□□□□ -0.67
ATG9A-215ENST00000446716 FLG2Q5D862 2391 aaPredicted RBP10.88□□□□□ -0.67
ATG9A-215ENST00000446716 A0A0D9SG42 100 aa10.88□□□□□ -0.67
ATG9A-215ENST00000446716 CRIPTQ9P021 101 aa10.88□□□□□ -0.67
ATG9A-215ENST00000446716 SPINT4Q6UDR6 99 aa10.88□□□□□ -0.67
ATG9A-215ENST00000446716 FRYQ5TBA9 3013 aa10.88□□□□□ -0.67
ATG9A-215ENST00000446716 KRTAP26-1Q6PEX3 210 aa10.87□□□□□ -0.67
ATG9A-215ENST00000446716 FLNCQ14315 2725 aa10.87□□□□□ -0.67
ATG9A-215ENST00000446716 UNC80Q8N2C7 3258 aa10.86□□□□□ -0.67
ATG9A-215ENST00000446716 ITPR1Q14643 2758 aa10.85□□□□□ -0.67
ATG9A-215ENST00000446716 SPRR1BP22528 89 aa10.85□□□□□ -0.67
ATG9A-215ENST00000446716 ZCCHC13Q8WW36 166 aaKnown RBP10.82□□□□□ -0.68
ATG9A-215ENST00000446716 OCR1Q9BZK8 76 aa10.81□□□□□ -0.68
ATG9A-215ENST00000446716 VPS13AQ96RL7 3174 aa10.8□□□□□ -0.68
ATG9A-215ENST00000446716 Q6ZR54 194 aa10.79□□□□□ -0.68
ATG9A-215ENST00000446716 SEC61BP60468 96 aaKnown RBP10.78□□□□□ -0.68
ATG9A-215ENST00000446716 DMBT1Q9UGM3 2413 aaPredicted RBP10.78□□□□□ -0.68
ATG9A-215ENST00000446716 MMP24-AS1A0A0U1RRL7 71 aa10.78□□□□□ -0.68
ATG9A-215ENST00000446716 HRES1P13985 223 aa10.78□□□□□ -0.68
ATG9A-215ENST00000446716 REV3LO60673 3130 aa10.77□□□□□ -0.69
ATG9A-215ENST00000446716 TACC2O95359 2948 aa10.75□□□□□ -0.69
ATG9A-215ENST00000446716 CSAG1Q6PB30 78 aa10.72□□□□□ -0.69
ATG9A-215ENST00000446716 LINC00472Q9H8W2 130 aa10.7□□□□□ -0.7
ATG9A-215ENST00000446716 CAMK2N1Q7Z7J9 78 aa10.7□□□□□ -0.7
ATG9A-215ENST00000446716 Q8N9P0 234 aaPredicted RBP10.69□□□□□ -0.7
ATG9A-215ENST00000446716 PANO1I0J062 215 aa10.69□□□□□ -0.7
ATG9A-215ENST00000446716 CDC42SE1Q9NRR8 79 aa10.68□□□□□ -0.7
ATG9A-215ENST00000446716 HIVEP1P15822 2718 aa10.68□□□□□ -0.7
ATG9A-215ENST00000446716 SPINK7P58062 85 aa10.68□□□□□ -0.7
ATG9A-215ENST00000446716 TENM4Q6N022 2769 aa10.66□□□□□ -0.7
ATG9A-215ENST00000446716 ATMQ13315 3056 aa10.65□□□□□ -0.7
ATG9A-215ENST00000446716 COL12A1Q99715 3063 aa10.63□□□□□ -0.71
ATG9A-215ENST00000446716 CDH23Q9H251 3354 aa10.63□□□□□ -0.71
ATG9A-215ENST00000446716 S4R3F8 94 aa10.63□□□□□ -0.71
ATG9A-215ENST00000446716 FRYLO94915 3013 aa10.63□□□□□ -0.71
ATG9A-215ENST00000446716 Q5W150 140 aa10.62□□□□□ -0.71
ATG9A-215ENST00000446716 A0A1B0GU33 70 aa10.61□□□□□ -0.71
ATG9A-215ENST00000446716 LINC00483Q53H64 154 aa10.6□□□□□ -0.71
ATG9A-215ENST00000446716 KRTAP21-3Q3LHN1 58 aa10.59□□□□□ -0.71
ATG9A-215ENST00000446716 KTN1-AS1Q86SY8 53 aa10.58□□□□□ -0.72
ATG9A-215ENST00000446716 FP248Q71RG6 208 aaPredicted RBP10.57□□□□□ -0.72
ATG9A-215ENST00000446716 KMT2BQ9UMN6 2715 aaPredicted RBP10.56□□□□□ -0.72
ATG9A-215ENST00000446716 OXTP01178 125 aa10.55□□□□□ -0.72
ATG9A-215ENST00000446716 LCA10Q71F78 164 aa10.54□□□□□ -0.72
ATG9A-215ENST00000446716 Q1T7F1 81 aa10.54□□□□□ -0.72
ATG9A-215ENST00000446716 UTP20O75691 2785 aaKnown RBP10.52□□□□□ -0.73
ATG9A-215ENST00000446716 H3BS24 57 aa10.51□□□□□ -0.73
ATG9A-215ENST00000446716 KRTAP4-16G5E9R7 235 aaPredicted RBP10.51□□□□□ -0.73
ATG9A-215ENST00000446716 A0A087X002 238 aa10.51□□□□□ -0.73
ATG9A-215ENST00000446716 Q6ZRN7 208 aaPredicted RBP10.49□□□□□ -0.73
ATG9A-215ENST00000446716 DMXL2Q8TDJ6 3036 aa10.49□□□□□ -0.73
ATG9A-215ENST00000446716 R4GN34 69 aa10.48□□□□□ -0.73
ATG9A-215ENST00000446716 LAMA1P25391 3075 aa10.47□□□□□ -0.73
ATG9A-215ENST00000446716 SZT2Q5T011 3432 aa10.43□□□□□ -0.74
ATG9A-215ENST00000446716 CELSR3Q9NYQ7 3312 aa10.41□□□□□ -0.74
ATG9A-215ENST00000446716 NIPBLQ6KC79 2804 aaeCLIP10.41□□□□□ -0.74
ATG9A-215ENST00000446716 DMAC1Q96GE9 116 aa10.4□□□□□ -0.74
ATG9A-215ENST00000446716 APCP25054 2843 aa10.38□□□□□ -0.75
ATG9A-215ENST00000446716 KALRNO60229 2985 aa10.38□□□□□ -0.75
ATG9A-215ENST00000446716 CRYBG3Q68DQ2 2970 aa10.37□□□□□ -0.75
ATG9A-215ENST00000446716 BOD1L1Q8NFC6 3051 aa10.36□□□□□ -0.75
ATG9A-215ENST00000446716 LINC01558Q9Y6Z2 57 aa10.35□□□□□ -0.75
ATG9A-215ENST00000446716 Q75L30 129 aa10.35□□□□□ -0.75
ATG9A-215ENST00000446716 KRTAP11-1Q8IUC1 163 aa10.34□□□□□ -0.75
ATG9A-215ENST00000446716 ADGRG4Q8IZF6 3080 aa10.34□□□□□ -0.75
ATG9A-215ENST00000446716 FREM2Q5SZK8 3169 aa10.33□□□□□ -0.76
ATG9A-215ENST00000446716 LRBAP50851 2863 aa10.32□□□□□ -0.76
ATG9A-215ENST00000446716 ZZEF1O43149 2961 aa10.31□□□□□ -0.76
ATG9A-215ENST00000446716 EYSQ5T1H1 3165 aa10.27□□□□□ -0.77
ATG9A-215ENST00000446716 CELSR2Q9HCU4 2923 aa10.27□□□□□ -0.77
ATG9A-215ENST00000446716 VCANP13611 3396 aa10.26□□□□□ -0.77
ATG9A-215ENST00000446716 COL6A3P12111 3177 aa10.26□□□□□ -0.77
ATG9A-215ENST00000446716 NBEAQ8NFP9 2946 aa10.26□□□□□ -0.77
ATG9A-215ENST00000446716 ASH1LQ9NR48 2969 aaKnown RBP10.26□□□□□ -0.77
ATG9A-215ENST00000446716 RPS29P62273 56 aaKnown RBP10.26□□□□□ -0.77
ATG9A-215ENST00000446716 M0QZ58 72 aa10.25□□□□□ -0.77
ATG9A-215ENST00000446716 LUZP6Q538Z0 58 aa10.25□□□□□ -0.77
ATG9A-215ENST00000446716 Q5XG85 94 aa10.24□□□□□ -0.77
ATG9A-215ENST00000446716 KRTAP7-1Q8IUC3 87 aa10.23□□□□□ -0.77
ATG9A-215ENST00000446716 ASB16-AS1Q495Z4 193 aa10.2□□□□□ -0.78
ATG9A-215ENST00000446716 KRTAP29-1A8MX34 341 aaPredicted RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms