RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 M0R2T5 61 aa11.02□□□□□ -0.65
CPNE1-219ENST00000440240 COX6B2Q6YFQ2 88 aa11.02□□□□□ -0.65
CPNE1-219ENST00000440240 Q6JHZ5 121 aa10.99□□□□□ -0.65
CPNE1-219ENST00000440240 LINC00575Q6W349 94 aa10.99□□□□□ -0.65
CPNE1-219ENST00000440240 hADV29S1A0JD25 119 aa10.96□□□□□ -0.65
CPNE1-219ENST00000440240 Q6ZQY7 126 aa10.95□□□□□ -0.66
CPNE1-219ENST00000440240 CLEC2BQ92478 149 aa10.94□□□□□ -0.66
CPNE1-219ENST00000440240 TRBV7-7A0A0K0K1E9 115 aa10.93□□□□□ -0.66
CPNE1-219ENST00000440240 OCIAD2Q56VL3 154 aa10.92□□□□□ -0.66
CPNE1-219ENST00000440240 IGFL1Q6UW32 110 aa10.91□□□□□ -0.66
CPNE1-219ENST00000440240 HSBP1L1C9JCN9 74 aa10.89□□□□□ -0.67
CPNE1-219ENST00000440240 ATP11AUNQ6ZP68 121 aa10.89□□□□□ -0.67
CPNE1-219ENST00000440240 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.88□□□□□ -0.67
CPNE1-219ENST00000440240 FLGP20930 4061 aaPredicted RBP10.87□□□□□ -0.67
CPNE1-219ENST00000440240 PPDPFLQ8WWR9 84 aa10.87□□□□□ -0.67
CPNE1-219ENST00000440240 Q75L30 129 aa10.86□□□□□ -0.67
CPNE1-219ENST00000440240 OBSCN-AS1Q96MR7 158 aa10.86□□□□□ -0.67
CPNE1-219ENST00000440240 SNHG12Q9BXW3 62 aa10.86□□□□□ -0.67
CPNE1-219ENST00000440240 BVES-AS1Q5T3Y7 98 aa10.85□□□□□ -0.67
CPNE1-219ENST00000440240 SCGB1D1O95968 90 aa10.83□□□□□ -0.68
CPNE1-219ENST00000440240 S100A2P29034 98 aa10.83□□□□□ -0.68
CPNE1-219ENST00000440240 LST1O00453 97 aa10.82□□□□□ -0.68
CPNE1-219ENST00000440240 HIST3H2BBQ8N257 126 aa10.81□□□□□ -0.68
CPNE1-219ENST00000440240 HIST1H2BLQ99880 126 aa10.81□□□□□ -0.68
CPNE1-219ENST00000440240 Q6Q795 121 aa10.8□□□□□ -0.68
CPNE1-219ENST00000440240 HIST1H4GQ99525 98 aa10.78□□□□□ -0.68
CPNE1-219ENST00000440240 Q96NJ1 140 aa10.77□□□□□ -0.69
CPNE1-219ENST00000440240 C12orf57Q99622 126 aa10.77□□□□□ -0.69
CPNE1-219ENST00000440240 H3BUT2 72 aa10.76□□□□□ -0.69
CPNE1-219ENST00000440240 SNCGO76070 127 aa10.76□□□□□ -0.69
CPNE1-219ENST00000440240 SS18L2Q9UHA2 77 aa10.76□□□□□ -0.69
CPNE1-219ENST00000440240 TEN1Q86WV5 123 aa10.71□□□□□ -0.69
CPNE1-219ENST00000440240 H0YGX0 51 aa10.69□□□□□ -0.7
CPNE1-219ENST00000440240 S100A6P06703 90 aa10.69□□□□□ -0.7
CPNE1-219ENST00000440240 COX8AP10176 69 aa10.69□□□□□ -0.7
CPNE1-219ENST00000440240 C20orf166-AS1Q96NR2 134 aa10.69□□□□□ -0.7
CPNE1-219ENST00000440240 NDUFV3P56181 108 aaKnown RBP10.67□□□□□ -0.7
CPNE1-219ENST00000440240 A8MUU9 505 aa10.66□□□□□ -0.7
CPNE1-219ENST00000440240 DLEU1O43261 78 aa10.66□□□□□ -0.7
CPNE1-219ENST00000440240 CFC1P0CG37 223 aa10.66□□□□□ -0.7
CPNE1-219ENST00000440240 RAB37Q96AX2 223 aa10.66□□□□□ -0.7
CPNE1-219ENST00000440240 TRBV20-1A0A075B6N2 111 aa10.64□□□□□ -0.71
CPNE1-219ENST00000440240 GHRHP01286 108 aa10.64□□□□□ -0.71
CPNE1-219ENST00000440240 A0A087WSZ3 146 aa10.63□□□□□ -0.71
CPNE1-219ENST00000440240 A0A0B4J2C4 111 aa10.6□□□□□ -0.71
CPNE1-219ENST00000440240 H3BMG7 143 aa10.6□□□□□ -0.71
CPNE1-219ENST00000440240 FAM218AQ96MZ4 157 aa10.6□□□□□ -0.71
CPNE1-219ENST00000440240 A0A1B0GX51 115 aa10.58□□□□□ -0.72
CPNE1-219ENST00000440240 HIGD1BQ9P298 99 aa10.58□□□□□ -0.72
CPNE1-219ENST00000440240 C14orf144Q96I85 54 aa10.57□□□□□ -0.72
CPNE1-219ENST00000440240 FABP2P12104 132 aa10.56□□□□□ -0.72
CPNE1-219ENST00000440240 KRTAP9-8Q9BYQ0 159 aa10.56□□□□□ -0.72
CPNE1-219ENST00000440240 DSCR10P59022 87 aa10.54□□□□□ -0.72
CPNE1-219ENST00000440240 PRO1854Q9UHT4 67 aa10.52□□□□□ -0.73
CPNE1-219ENST00000440240 LINC00313P59037 77 aa10.51□□□□□ -0.73
CPNE1-219ENST00000440240 SIGMAR1Q99720 223 aa10.51□□□□□ -0.73
CPNE1-219ENST00000440240 A0A1W2PNM2 257 aa10.5□□□□□ -0.73
CPNE1-219ENST00000440240 S100A1P23297 94 aa10.5□□□□□ -0.73
CPNE1-219ENST00000440240 TMEM238LA0A1B0GVL6 79 aa10.49□□□□□ -0.73
CPNE1-219ENST00000440240 A6NJY4 79 aa10.49□□□□□ -0.73
CPNE1-219ENST00000440240 SPATA45Q537H7 98 aa10.49□□□□□ -0.73
CPNE1-219ENST00000440240 CEND1Q8N111 149 aa10.49□□□□□ -0.73
CPNE1-219ENST00000440240 PAM16Q9Y3D7 125 aa10.49□□□□□ -0.73
CPNE1-219ENST00000440240 USH2AO75445 5202 aa10.49□□□□□ -0.73
CPNE1-219ENST00000440240 C2orf91Q6ZV80 131 aa10.47□□□□□ -0.73
CPNE1-219ENST00000440240 ANKRD29Q8N6D5 301 aa10.47□□□□□ -0.73
CPNE1-219ENST00000440240 TRBV7-4A0A0J9YYF1 115 aa10.46□□□□□ -0.73
CPNE1-219ENST00000440240 IGKV4-1P06312 121 aa10.46□□□□□ -0.73
CPNE1-219ENST00000440240 SSPOA2VEC9 5147 aa10.45□□□□□ -0.74
CPNE1-219ENST00000440240 FAM236DA0A1B0GTK5 79 aa10.44□□□□□ -0.74
CPNE1-219ENST00000440240 KRTAP16-1A8MUX0 517 aa10.44□□□□□ -0.74
CPNE1-219ENST00000440240 H3BQ85 93 aa10.44□□□□□ -0.74
CPNE1-219ENST00000440240 FAM236CP0DP71 79 aa10.44□□□□□ -0.74
CPNE1-219ENST00000440240 VAMP8Q9BV40 100 aa10.44□□□□□ -0.74
CPNE1-219ENST00000440240 TRIAP1O43715 76 aa10.42□□□□□ -0.74
CPNE1-219ENST00000440240 DNAL4O96015 105 aa10.42□□□□□ -0.74
CPNE1-219ENST00000440240 ORMDL1Q9P0S3 153 aa10.41□□□□□ -0.74
CPNE1-219ENST00000440240 RBM12B-AS1Q9P1G2 102 aa10.41□□□□□ -0.74
CPNE1-219ENST00000440240 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.39□□□□□ -0.75
CPNE1-219ENST00000440240 FXYD2P54710 66 aa10.39□□□□□ -0.75
CPNE1-219ENST00000440240 TMEM256-PLSCR3K7ERE1 68 aa10.38□□□□□ -0.75
CPNE1-219ENST00000440240 NOTCH2NLQ7Z3S9 236 aa10.37□□□□□ -0.75
CPNE1-219ENST00000440240 LINC00472Q9H8W2 130 aa10.37□□□□□ -0.75
CPNE1-219ENST00000440240 MT2AP02795 61 aa10.36□□□□□ -0.75
CPNE1-219ENST00000440240 DEFB116Q30KQ4 102 aa10.36□□□□□ -0.75
CPNE1-219ENST00000440240 MPLKIPQ8TAP9 179 aa10.36□□□□□ -0.75
CPNE1-219ENST00000440240 A0A1B0GV72 72 aa10.35□□□□□ -0.75
CPNE1-219ENST00000440240 KRTAP9-7A8MTY7 169 aa10.35□□□□□ -0.75
CPNE1-219ENST00000440240 TRACP01848 142 aa10.35□□□□□ -0.75
CPNE1-219ENST00000440240 CCKP06307 115 aa10.35□□□□□ -0.75
CPNE1-219ENST00000440240 PSMB2P49721 201 aa10.35□□□□□ -0.75
CPNE1-219ENST00000440240 COX6CP09669 75 aa10.34□□□□□ -0.75
CPNE1-219ENST00000440240 HRES1P13985 223 aa10.34□□□□□ -0.75
CPNE1-219ENST00000440240 IGHV6-1A0A0B4J1U7 121 aa10.33□□□□□ -0.76
CPNE1-219ENST00000440240 UBE2V1Q13404 147 aa10.29□□□□□ -0.76
CPNE1-219ENST00000440240 C8orf87E5RJ46 101 aa10.27□□□□□ -0.77
CPNE1-219ENST00000440240 MT1FP04733 61 aa10.27□□□□□ -0.77
CPNE1-219ENST00000440240 KRTAP10-10P60014 251 aa10.27□□□□□ -0.77
CPNE1-219ENST00000440240 HSD52Q0P140 79 aa10.27□□□□□ -0.77
CPNE1-219ENST00000440240 MTURNQ8N3F0 131 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms