RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 A4D1N5 150 aa11.21□□□□□ -0.61
SHROOM1-204ENST00000440118 ELOF1P60002 83 aaKnown RBP11.21□□□□□ -0.61
SHROOM1-204ENST00000440118 Q8N377 158 aa11.21□□□□□ -0.61
SHROOM1-204ENST00000440118 COX6CP09669 75 aa11.2□□□□□ -0.62
SHROOM1-204ENST00000440118 LAMTOR3Q9UHA4 124 aa11.2□□□□□ -0.62
SHROOM1-204ENST00000440118 TRBV20-1A0A075B6N2 111 aa11.19□□□□□ -0.62
SHROOM1-204ENST00000440118 K7EP34 96 aa11.19□□□□□ -0.62
SHROOM1-204ENST00000440118 CFC1BP0CG36 223 aa11.19□□□□□ -0.62
SHROOM1-204ENST00000440118 CFC1P0CG37 223 aa11.19□□□□□ -0.62
SHROOM1-204ENST00000440118 KRTAP13-3Q3SY46 172 aa11.19□□□□□ -0.62
SHROOM1-204ENST00000440118 SPCS1Q9Y6A9 102 aa11.19□□□□□ -0.62
SHROOM1-204ENST00000440118 DEFB105AQ8NG35 78 aa11.17□□□□□ -0.62
SHROOM1-204ENST00000440118 SPRR1BP22528 89 aa11.16□□□□□ -0.62
SHROOM1-204ENST00000440118 K7ERJ3 54 aa11.15□□□□□ -0.62
SHROOM1-204ENST00000440118 SCGB1C2P0DMR2 95 aa11.15□□□□□ -0.62
SHROOM1-204ENST00000440118 PSMB2P49721 201 aa11.15□□□□□ -0.62
SHROOM1-204ENST00000440118 Q1RN00 199 aa11.15□□□□□ -0.62
SHROOM1-204ENST00000440118 HRCT1Q6UXD1 115 aa11.15□□□□□ -0.62
SHROOM1-204ENST00000440118 TRAV13-2A0A0B4J235 113 aa11.14□□□□□ -0.63
SHROOM1-204ENST00000440118 TRBV7-6A0A0J9YX20 115 aa11.14□□□□□ -0.63
SHROOM1-204ENST00000440118 LIMD2Q9BT23 127 aa11.14□□□□□ -0.63
SHROOM1-204ENST00000440118 MUC17Q685J3 4493 aa11.13□□□□□ -0.63
SHROOM1-204ENST00000440118 TEX49A0A1B0GTD5 131 aa11.11□□□□□ -0.63
SHROOM1-204ENST00000440118 F8W1H4 67 aa11.11□□□□□ -0.63
SHROOM1-204ENST00000440118 SEC61BP60468 96 aaKnown RBP11.08□□□□□ -0.64
SHROOM1-204ENST00000440118 ATXN8Q156A1 80 aa11.05□□□□□ -0.64
SHROOM1-204ENST00000440118 ASB16-AS1Q495Z4 193 aa11.05□□□□□ -0.64
SHROOM1-204ENST00000440118 SMIM11BQ8TCY0 68 aa11.05□□□□□ -0.64
SHROOM1-204ENST00000440118 NAA38Q9BRA0 125 aaKnown RBP11.05□□□□□ -0.64
SHROOM1-204ENST00000440118 FAT4Q6V0I7 4981 aa11.05□□□□□ -0.64
SHROOM1-204ENST00000440118 H7C2G1 150 aa11.03□□□□□ -0.64
SHROOM1-204ENST00000440118 SNCGO76070 127 aa11.02□□□□□ -0.65
SHROOM1-204ENST00000440118 IGLV5-48A0A075B6I7 105 aa11.01□□□□□ -0.65
SHROOM1-204ENST00000440118 CD164Q04900 197 aa11.01□□□□□ -0.65
SHROOM1-204ENST00000440118 J3QR89 54 aa11□□□□□ -0.65
SHROOM1-204ENST00000440118 F8WEM9 126 aa10.99□□□□□ -0.65
SHROOM1-204ENST00000440118 H0YGX0 51 aa10.99□□□□□ -0.65
SHROOM1-204ENST00000440118 H3BMG7 143 aa10.98□□□□□ -0.65
SHROOM1-204ENST00000440118 K7ERU9 68 aa10.98□□□□□ -0.65
SHROOM1-204ENST00000440118 XP32Q5T750 250 aa10.98□□□□□ -0.65
SHROOM1-204ENST00000440118 SMIM29Q86T20 159 aa10.98□□□□□ -0.65
SHROOM1-204ENST00000440118 LINC01547P58512 204 aaPredicted RBP10.97□□□□□ -0.65
SHROOM1-204ENST00000440118 TRIAP1O43715 76 aa10.95□□□□□ -0.66
SHROOM1-204ENST00000440118 LCE2AQ5TA79 106 aaPredicted RBP10.95□□□□□ -0.66
SHROOM1-204ENST00000440118 C9orf92A6NGG3 77 aa10.94□□□□□ -0.66
SHROOM1-204ENST00000440118 TCL1BO95988 128 aa10.94□□□□□ -0.66
SHROOM1-204ENST00000440118 A0A0G2JQZ4 141 aa10.92□□□□□ -0.66
SHROOM1-204ENST00000440118 hADV29S1A0JD25 119 aa10.91□□□□□ -0.66
SHROOM1-204ENST00000440118 LINC00575Q6W349 94 aa10.91□□□□□ -0.66
SHROOM1-204ENST00000440118 Q6ZQY7 126 aa10.91□□□□□ -0.66
SHROOM1-204ENST00000440118 LST1O00453 97 aa10.9□□□□□ -0.66
SHROOM1-204ENST00000440118 TRACP01848 142 aa10.9□□□□□ -0.66
SHROOM1-204ENST00000440118 A0A1B0GX51 115 aa10.89□□□□□ -0.67
SHROOM1-204ENST00000440118 H3BT86 120 aa10.89□□□□□ -0.67
SHROOM1-204ENST00000440118 OCIAD2Q56VL3 154 aa10.88□□□□□ -0.67
SHROOM1-204ENST00000440118 Q5XG85 94 aa10.88□□□□□ -0.67
SHROOM1-204ENST00000440118 KRTAP9-2Q9BYQ4 174 aa10.88□□□□□ -0.67
SHROOM1-204ENST00000440118 GHRHP01286 108 aa10.87□□□□□ -0.67
SHROOM1-204ENST00000440118 C9JAW5 83 aa10.86□□□□□ -0.67
SHROOM1-204ENST00000440118 DNAL4O96015 105 aa10.86□□□□□ -0.67
SHROOM1-204ENST00000440118 ANKRD29Q8N6D5 301 aa10.86□□□□□ -0.67
SHROOM1-204ENST00000440118 KRTAP4-1Q9BYQ7 146 aa10.86□□□□□ -0.67
SHROOM1-204ENST00000440118 H3BQ85 93 aa10.85□□□□□ -0.67
SHROOM1-204ENST00000440118 PRO0461Q9UI25 63 aa10.85□□□□□ -0.67
SHROOM1-204ENST00000440118 C1orf195Q5TG92 126 aa10.84□□□□□ -0.67
SHROOM1-204ENST00000440118 Q6JHZ5 121 aa10.83□□□□□ -0.68
SHROOM1-204ENST00000440118 TEN1Q86WV5 123 aa10.83□□□□□ -0.68
SHROOM1-204ENST00000440118 PCOTHQ58A44 107 aa10.82□□□□□ -0.68
SHROOM1-204ENST00000440118 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.82□□□□□ -0.68
SHROOM1-204ENST00000440118 PPDPFLQ8WWR9 84 aa10.82□□□□□ -0.68
SHROOM1-204ENST00000440118 CLEC2BQ92478 149 aa10.82□□□□□ -0.68
SHROOM1-204ENST00000440118 ETDBQ3ZM63 59 aa10.81□□□□□ -0.68
SHROOM1-204ENST00000440118 IGLV8-61A0A075B6I0 122 aa10.79□□□□□ -0.68
SHROOM1-204ENST00000440118 IGFL1Q6UW32 110 aa10.76□□□□□ -0.69
SHROOM1-204ENST00000440118 TRBV7-7A0A0K0K1E9 115 aa10.75□□□□□ -0.69
SHROOM1-204ENST00000440118 BAALC-AS2P0C853 105 aa10.73□□□□□ -0.69
SHROOM1-204ENST00000440118 SMCPP49901 116 aaPredicted RBP10.73□□□□□ -0.69
SHROOM1-204ENST00000440118 ORMDL1Q9P0S3 153 aa10.72□□□□□ -0.69
SHROOM1-204ENST00000440118 VPS25Q9BRG1 176 aa10.71□□□□□ -0.69
SHROOM1-204ENST00000440118 TMEM256-PLSCR3K7ERE1 68 aa10.7□□□□□ -0.7
SHROOM1-204ENST00000440118 C21orf62-AS1Q17RA5 79 aa10.7□□□□□ -0.7
SHROOM1-204ENST00000440118 MTURNQ8N3F0 131 aa10.7□□□□□ -0.7
SHROOM1-204ENST00000440118 RPL37P61927 97 aaKnown RBP10.69□□□□□ -0.7
SHROOM1-204ENST00000440118 JMJD7-PLA2G4BH0Y9G9 81 aa10.66□□□□□ -0.7
SHROOM1-204ENST00000440118 ACYP1P07311 99 aa10.66□□□□□ -0.7
SHROOM1-204ENST00000440118 FAM218AQ96MZ4 157 aa10.64□□□□□ -0.71
SHROOM1-204ENST00000440118 SS18L2Q9UHA2 77 aa10.64□□□□□ -0.71
SHROOM1-204ENST00000440118 NDUFV3P56181 108 aaKnown RBP10.62□□□□□ -0.71
SHROOM1-204ENST00000440118 FAM240AA0A1B0GVK7 77 aa10.61□□□□□ -0.71
SHROOM1-204ENST00000440118 OBSCN-AS1Q96MR7 158 aa10.6□□□□□ -0.71
SHROOM1-204ENST00000440118 KRTAP9-6A0A140TA67 174 aa10.57□□□□□ -0.72
SHROOM1-204ENST00000440118 PDE6GP18545 87 aa10.57□□□□□ -0.72
SHROOM1-204ENST00000440118 LCE2CQ5TA81 110 aa10.56□□□□□ -0.72
SHROOM1-204ENST00000440118 COX6B2Q6YFQ2 88 aa10.56□□□□□ -0.72
SHROOM1-204ENST00000440118 Q6Q795 121 aa10.55□□□□□ -0.72
SHROOM1-204ENST00000440118 SIGMAR1Q99720 223 aa10.55□□□□□ -0.72
SHROOM1-204ENST00000440118 A0A087WSZ3 146 aa10.54□□□□□ -0.72
SHROOM1-204ENST00000440118 ATP11AUNQ6ZP68 121 aa10.54□□□□□ -0.72
SHROOM1-204ENST00000440118 KRTAP19-2Q3LHN2 52 aa10.53□□□□□ -0.72
SHROOM1-204ENST00000440118 MT1HP80294 61 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 172.6 ms