RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 PSCAO43653 123 aa9.66□□□□□ -0.86
APP-208ENST00000439274 LINC00336Q6ZUF6 198 aa9.66□□□□□ -0.86
APP-208ENST00000439274 LCE6AA0A183 80 aa9.65□□□□□ -0.86
APP-208ENST00000439274 C16orf90A8MZG2 172 aa9.65□□□□□ -0.86
APP-208ENST00000439274 KRTAP11-1Q8IUC1 163 aa9.65□□□□□ -0.86
APP-208ENST00000439274 COL7A1Q02388 2944 aa9.64□□□□□ -0.87
APP-208ENST00000439274 MGAM2Q2M2H8 2515 aa9.64□□□□□ -0.87
APP-208ENST00000439274 A0A087WSZ3 146 aa9.64□□□□□ -0.87
APP-208ENST00000439274 CHTF8P0CG12 524 aa9.64□□□□□ -0.87
APP-208ENST00000439274 HCG22E2RYF7 251 aa9.63□□□□□ -0.87
APP-208ENST00000439274 MPLKIPQ8TAP9 179 aa9.63□□□□□ -0.87
APP-208ENST00000439274 PHF5AQ7RTV0 110 aaKnown RBP9.62□□□□□ -0.87
APP-208ENST00000439274 CNBPP62633 177 aaKnown RBP9.61□□□□□ -0.87
APP-208ENST00000439274 RPL37AP61513 92 aaKnown RBP9.61□□□□□ -0.87
APP-208ENST00000439274 WFDC13Q8IUB5 93 aa9.61□□□□□ -0.87
APP-208ENST00000439274 TENM2Q9NT68 2774 aa9.6□□□□□ -0.87
APP-208ENST00000439274 DNAH7Q8WXX0 4024 aa9.6□□□□□ -0.87
APP-208ENST00000439274 UBE2AP49459 152 aa9.6□□□□□ -0.87
APP-208ENST00000439274 ZCCHC13Q8WW36 166 aaKnown RBP9.6□□□□□ -0.87
APP-208ENST00000439274 IGLV8-61A0A075B6I0 122 aa9.58□□□□□ -0.88
APP-208ENST00000439274 UBE2DNLQ8IWF7 75 aa9.57□□□□□ -0.88
APP-208ENST00000439274 LRCOL1A6NCL2 159 aa9.55□□□□□ -0.88
APP-208ENST00000439274 PRR4Q16378 134 aa9.55□□□□□ -0.88
APP-208ENST00000439274 DNHD1Q96M86 4753 aa9.54□□□□□ -0.88
APP-208ENST00000439274 hDV103S1A0JD37 113 aa9.53□□□□□ -0.88
APP-208ENST00000439274 C1orf64Q8NEQ6 169 aa9.53□□□□□ -0.88
APP-208ENST00000439274 PRO0628Q9UI54 55 aa9.52□□□□□ -0.88
APP-208ENST00000439274 APLNQ9ULZ1 77 aa9.52□□□□□ -0.89
APP-208ENST00000439274 PLECQ15149 4684 aaKnown RBP9.51□□□□□ -0.89
APP-208ENST00000439274 PANO1I0J062 215 aa9.49□□□□□ -0.89
APP-208ENST00000439274 DYNC2H1Q8NCM8 4307 aaKnown RBP9.49□□□□□ -0.89
APP-208ENST00000439274 KRTAP29-1A8MX34 341 aaPredicted RBP9.49□□□□□ -0.89
APP-208ENST00000439274 BRK1Q8WUW1 75 aa9.48□□□□□ -0.89
APP-208ENST00000439274 SPRR1BP22528 89 aa9.48□□□□□ -0.89
APP-208ENST00000439274 C14orf177Q52M58 125 aa9.48□□□□□ -0.89
APP-208ENST00000439274 C9orf163Q8N9P6 203 aa9.47□□□□□ -0.89
APP-208ENST00000439274 B9D2Q9BPU9 175 aa9.47□□□□□ -0.89
APP-208ENST00000439274 H0Y9J4 135 aa9.46□□□□□ -0.89
APP-208ENST00000439274 LINC00208Q96KT6 92 aa9.46□□□□□ -0.89
APP-208ENST00000439274 CASC2Q6XLA1 102 aa9.46□□□□□ -0.9
APP-208ENST00000439274 PRR15Q8IV56 129 aa9.46□□□□□ -0.9
APP-208ENST00000439274 LINC00472Q9H8W2 130 aa9.46□□□□□ -0.9
APP-208ENST00000439274 MP68P56378 58 aa9.45□□□□□ -0.9
APP-208ENST00000439274 PRKDCP78527 4128 aaKnown RBP9.44□□□□□ -0.9
APP-208ENST00000439274 TRAV22A0A0B4J277 110 aa9.43□□□□□ -0.9
APP-208ENST00000439274 A8MWP4 228 aa9.43□□□□□ -0.9
APP-208ENST00000439274 H0Y9P7 68 aa9.42□□□□□ -0.9
APP-208ENST00000439274 CYP4F30PQ9H0H9 118 aa9.42□□□□□ -0.9
APP-208ENST00000439274 NBDYA0A0U1RRE5 68 aa9.4□□□□□ -0.91
APP-208ENST00000439274 NDUFB1O75438 58 aa9.4□□□□□ -0.91
APP-208ENST00000439274 KRTAP13-1Q8IUC0 172 aa9.4□□□□□ -0.91
APP-208ENST00000439274 MEGF8Q7Z7M0 2845 aa9.38□□□□□ -0.91
APP-208ENST00000439274 IGLV9-49A0A0B4J1Y8 123 aa9.38□□□□□ -0.91
APP-208ENST00000439274 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.38□□□□□ -0.91
APP-208ENST00000439274 Q6ZRN7 208 aaPredicted RBP9.38□□□□□ -0.91
APP-208ENST00000439274 PKIGQ9Y2B9 76 aa9.38□□□□□ -0.91
APP-208ENST00000439274 Q1T7F1 81 aa9.36□□□□□ -0.91
APP-208ENST00000439274 MMP24-AS1A0A0U1RRL7 71 aa9.36□□□□□ -0.91
APP-208ENST00000439274 PSPHP1O15172 72 aa9.35□□□□□ -0.91
APP-208ENST00000439274 STARD9Q9P2P6 4700 aa9.34□□□□□ -0.91
APP-208ENST00000439274 SPACA4Q8TDM5 124 aa9.32□□□□□ -0.92
APP-208ENST00000439274 Q96NJ1 140 aa9.32□□□□□ -0.92
APP-208ENST00000439274 FRAS1Q86XX4 4008 aa9.31□□□□□ -0.92
APP-208ENST00000439274 HECTD4Q9Y4D8 3996 aa9.31□□□□□ -0.92
APP-208ENST00000439274 H3BPC8 53 aa9.3□□□□□ -0.92
APP-208ENST00000439274 VPS13DQ5THJ4 4388 aa9.3□□□□□ -0.92
APP-208ENST00000439274 KRTAP21-3Q3LHN1 58 aa9.29□□□□□ -0.92
APP-208ENST00000439274 DNAH8Q96JB1 4490 aa9.29□□□□□ -0.92
APP-208ENST00000439274 MOBPQ13875 183 aa9.28□□□□□ -0.92
APP-208ENST00000439274 SPANXA2-OT1Q8N9U9 137 aa9.28□□□□□ -0.92
APP-208ENST00000439274 ANAPC11Q9NYG5 84 aa9.28□□□□□ -0.92
APP-208ENST00000439274 NUPR2A6NF83 97 aa9.26□□□□□ -0.93
APP-208ENST00000439274 A8MUN3 132 aa9.26□□□□□ -0.93
APP-208ENST00000439274 DNAH2Q9P225 4427 aa9.25□□□□□ -0.93
APP-208ENST00000439274 A0A087WTM6 91 aa9.24□□□□□ -0.93
APP-208ENST00000439274 LINC00483Q53H64 154 aa9.24□□□□□ -0.93
APP-208ENST00000439274 PSORS1C2Q9UIG4 136 aa9.24□□□□□ -0.93
APP-208ENST00000439274 KMT2AQ03164 3969 aa9.24□□□□□ -0.93
APP-208ENST00000439274 PCOTHQ58A44 107 aa9.23□□□□□ -0.93
APP-208ENST00000439274 IGHV6-1A0A0B4J1U7 121 aa9.23□□□□□ -0.93
APP-208ENST00000439274 WWC2-AS2Q96NR7 200 aa9.23□□□□□ -0.93
APP-208ENST00000439274 C8orf17Q9NRJ1 99 aa9.23□□□□□ -0.93
APP-208ENST00000439274 ASB16-AS1Q495Z4 193 aa9.22□□□□□ -0.93
APP-208ENST00000439274 RTL8CO15255 209 aa9.21□□□□□ -0.94
APP-208ENST00000439274 DNAH17Q9UFH2 4485 aa9.2□□□□□ -0.94
APP-208ENST00000439274 IGLV5-52A0A0A0MRZ9 124 aa9.2□□□□□ -0.94
APP-208ENST00000439274 NDUFS5O43920 106 aa9.2□□□□□ -0.94
APP-208ENST00000439274 FBN3Q75N90 2809 aa9.19□□□□□ -0.94
APP-208ENST00000439274 C1orf195Q5TG92 126 aa9.19□□□□□ -0.94
APP-208ENST00000439274 A0A087X002 238 aa9.18□□□□□ -0.94
APP-208ENST00000439274 A0A1B0GVX0 72 aa9.18□□□□□ -0.94
APP-208ENST00000439274 CD164Q04900 197 aa9.18□□□□□ -0.94
APP-208ENST00000439274 NOTCH2NLQ7Z3S9 236 aa9.18□□□□□ -0.94
APP-208ENST00000439274 Q8N9P0 234 aaPredicted RBP9.18□□□□□ -0.94
APP-208ENST00000439274 Q5VV11 94 aa9.17□□□□□ -0.94
APP-208ENST00000439274 IGLV7-46A0A075B6I9 117 aa9.17□□□□□ -0.94
APP-208ENST00000439274 ZNF706Q9Y5V0 76 aaPredicted RBP9.17□□□□□ -0.94
APP-208ENST00000439274 V9GYY9 64 aa9.17□□□□□ -0.94
APP-208ENST00000439274 COA5Q86WW8 74 aa9.16□□□□□ -0.94
APP-208ENST00000439274 A8MU10 97 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms