RNA–Protein interactions for RNA: ENST00000439117.6

TSC2-206, Transcript of TSC complex subunit 2, humanhuman

TSL 1 (best)

Gene TSC2, Length 5,073 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-206ENST00000439117 IGLV5-37A0A075B6J1 123 aa9.57□□□□□ -0.88
TSC2-206ENST00000439117 Q5VV11 94 aa9.56□□□□□ -0.88
TSC2-206ENST00000439117 OXTP01178 125 aa9.56□□□□□ -0.88
TSC2-206ENST00000439117 XIRP2A4UGR9 3374 aa9.55□□□□□ -0.88
TSC2-206ENST00000439117 MAP1AP78559 2803 aaPredicted RBP9.53□□□□□ -0.88
TSC2-206ENST00000439117 CASC10Q5T4H9 136 aa9.52□□□□□ -0.88
TSC2-206ENST00000439117 LUZP6Q538Z0 58 aa9.5□□□□□ -0.89
TSC2-206ENST00000439117 CNBPP62633 177 aaKnown RBP9.49□□□□□ -0.89
TSC2-206ENST00000439117 PRAC1Q96KF2 57 aa9.49□□□□□ -0.89
TSC2-206ENST00000439117 VPS13AQ96RL7 3174 aa9.48□□□□□ -0.89
TSC2-206ENST00000439117 CDH23Q9H251 3354 aa9.48□□□□□ -0.89
TSC2-206ENST00000439117 BAHCC1Q9P281 2608 aa9.46□□□□□ -0.89
TSC2-206ENST00000439117 NOTCH1P46531 2555 aa9.46□□□□□ -0.89
TSC2-206ENST00000439117 Q8N1X5 172 aa9.44□□□□□ -0.9
TSC2-206ENST00000439117 A0A1B0GU33 70 aa9.43□□□□□ -0.9
TSC2-206ENST00000439117 HRES1P13985 223 aa9.43□□□□□ -0.9
TSC2-206ENST00000439117 LINC00304Q8N9R0 145 aa9.42□□□□□ -0.9
TSC2-206ENST00000439117 A0A0D9SG42 100 aa9.41□□□□□ -0.9
TSC2-206ENST00000439117 PSORS1C2Q9UIG4 136 aa9.4□□□□□ -0.9
TSC2-206ENST00000439117 MMP24-AS1A0A0U1RRL7 71 aa9.39□□□□□ -0.91
TSC2-206ENST00000439117 SMR3BP02814 79 aaPredicted RBP9.39□□□□□ -0.91
TSC2-206ENST00000439117 ANAPC11Q9NYG5 84 aa9.39□□□□□ -0.91
TSC2-206ENST00000439117 IGLV7-43P04211 117 aa9.39□□□□□ -0.91
TSC2-206ENST00000439117 SPINK7P58062 85 aa9.38□□□□□ -0.91
TSC2-206ENST00000439117 CSAG1Q6PB30 78 aa9.38□□□□□ -0.91
TSC2-206ENST00000439117 UBR5O95071 2799 aaPredicted RBP9.37□□□□□ -0.91
TSC2-206ENST00000439117 J3QL48 77 aa9.36□□□□□ -0.91
TSC2-206ENST00000439117 DMAC1Q96GE9 116 aa9.35□□□□□ -0.91
TSC2-206ENST00000439117 FLNCQ14315 2725 aa9.35□□□□□ -0.91
TSC2-206ENST00000439117 GCN1Q92616 2671 aaKnown RBP9.35□□□□□ -0.91
TSC2-206ENST00000439117 TNP2Q05952 138 aa9.33□□□□□ -0.92
TSC2-206ENST00000439117 ASB16-AS1Q495Z4 193 aa9.33□□□□□ -0.92
TSC2-206ENST00000439117 SPRR1AP35321 89 aa9.32□□□□□ -0.92
TSC2-206ENST00000439117 C9orf92A6NGG3 77 aa9.32□□□□□ -0.92
TSC2-206ENST00000439117 SZT2Q5T011 3432 aa9.31□□□□□ -0.92
TSC2-206ENST00000439117 NBEAL1Q6ZS30 2694 aa9.31□□□□□ -0.92
TSC2-206ENST00000439117 Q8NDZ9 215 aa9.31□□□□□ -0.92
TSC2-206ENST00000439117 FRYQ5TBA9 3013 aa9.3□□□□□ -0.92
TSC2-206ENST00000439117 LINC00472Q9H8W2 130 aa9.27□□□□□ -0.93
TSC2-206ENST00000439117 A0A0A0MQY5 61 aa9.25□□□□□ -0.93
TSC2-206ENST00000439117 FRYLO94915 3013 aa9.23□□□□□ -0.93
TSC2-206ENST00000439117 SPRR1BP22528 89 aa9.23□□□□□ -0.93
TSC2-206ENST00000439117 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.23□□□□□ -0.93
TSC2-206ENST00000439117 LAMA1P25391 3075 aa9.21□□□□□ -0.93
TSC2-206ENST00000439117 ITPR1Q14643 2758 aa9.21□□□□□ -0.94
TSC2-206ENST00000439117 ATMQ13315 3056 aa9.21□□□□□ -0.94
TSC2-206ENST00000439117 NBEAL2Q6ZNJ1 2754 aa9.19□□□□□ -0.94
TSC2-206ENST00000439117 Q5W150 140 aa9.17□□□□□ -0.94
TSC2-206ENST00000439117 ITPR2Q14571 2701 aa9.17□□□□□ -0.94
TSC2-206ENST00000439117 ZCCHC13Q8WW36 166 aaKnown RBP9.17□□□□□ -0.94
TSC2-206ENST00000439117 COL12A1Q99715 3063 aa9.16□□□□□ -0.94
TSC2-206ENST00000439117 NSD1Q96L73 2696 aaPredicted RBP9.15□□□□□ -0.94
TSC2-206ENST00000439117 CELSR3Q9NYQ7 3312 aa9.15□□□□□ -0.95
TSC2-206ENST00000439117 TACC2O95359 2948 aa9.14□□□□□ -0.95
TSC2-206ENST00000439117 VCANP13611 3396 aa9.14□□□□□ -0.95
TSC2-206ENST00000439117 COX6B2Q6YFQ2 88 aa9.12□□□□□ -0.95
TSC2-206ENST00000439117 DMXL2Q8TDJ6 3036 aa9.12□□□□□ -0.95
TSC2-206ENST00000439117 PLAC8Q9NZF1 115 aa9.11□□□□□ -0.95
TSC2-206ENST00000439117 KRTAP1-5Q9BYS1 174 aa9.11□□□□□ -0.95
TSC2-206ENST00000439117 LINC00483Q53H64 154 aa9.1□□□□□ -0.95
TSC2-206ENST00000439117 COL6A3P12111 3177 aa9.1□□□□□ -0.95
TSC2-206ENST00000439117 A6NN06 94 aa9.08□□□□□ -0.96
TSC2-206ENST00000439117 Q6ZR54 194 aa9.08□□□□□ -0.96
TSC2-206ENST00000439117 KRTAP29-1A8MX34 341 aaPredicted RBP9.07□□□□□ -0.96
TSC2-206ENST00000439117 ROMO1P60602 79 aa9.07□□□□□ -0.96
TSC2-206ENST00000439117 BOD1L1Q8NFC6 3051 aa9.06□□□□□ -0.96
TSC2-206ENST00000439117 KRTAP26-1Q6PEX3 210 aa9.06□□□□□ -0.96
TSC2-206ENST00000439117 TNRC18O15417 2968 aaPredicted RBP9.06□□□□□ -0.96
TSC2-206ENST00000439117 ADGRG4Q8IZF6 3080 aa9.06□□□□□ -0.96
TSC2-206ENST00000439117 RPL37P61927 97 aaKnown RBP9.05□□□□□ -0.96
TSC2-206ENST00000439117 SPATA8Q6RVD6 105 aa9.04□□□□□ -0.96
TSC2-206ENST00000439117 CAMK2N1Q7Z7J9 78 aa9.04□□□□□ -0.96
TSC2-206ENST00000439117 HIVEP1P15822 2718 aa9.04□□□□□ -0.96
TSC2-206ENST00000439117 FLG2Q5D862 2391 aaPredicted RBP9.02□□□□□ -0.97
TSC2-206ENST00000439117 UTP20O75691 2785 aaKnown RBP9□□□□□ -0.97
TSC2-206ENST00000439117 KALRNO60229 2985 aa9□□□□□ -0.97
TSC2-206ENST00000439117 NBEAQ8NFP9 2946 aa8.98□□□□□ -0.97
TSC2-206ENST00000439117 LCE6AA0A183 80 aa8.98□□□□□ -0.97
TSC2-206ENST00000439117 STAB2Q8WWQ8 2551 aa8.98□□□□□ -0.97
TSC2-206ENST00000439117 H1FX-AS1Q4G0G2 97 aa8.96□□□□□ -0.97
TSC2-206ENST00000439117 KRTAP16-1A8MUX0 517 aa8.96□□□□□ -0.98
TSC2-206ENST00000439117 DNAH14Q0VDD8 3507 aa8.95□□□□□ -0.98
TSC2-206ENST00000439117 REV3LO60673 3130 aa8.95□□□□□ -0.98
TSC2-206ENST00000439117 KRTAP4-16G5E9R7 235 aaPredicted RBP8.94□□□□□ -0.98
TSC2-206ENST00000439117 APCP25054 2843 aa8.93□□□□□ -0.98
TSC2-206ENST00000439117 ZZEF1O43149 2961 aa8.93□□□□□ -0.98
TSC2-206ENST00000439117 LRBAP50851 2863 aa8.92□□□□□ -0.98
TSC2-206ENST00000439117 S4R3F8 94 aa8.91□□□□□ -0.98
TSC2-206ENST00000439117 FREM2Q5SZK8 3169 aa8.9□□□□□ -0.98
TSC2-206ENST00000439117 EYSQ5T1H1 3165 aa8.9□□□□□ -0.98
TSC2-206ENST00000439117 Q6ZSA8 131 aa8.9□□□□□ -0.98
TSC2-206ENST00000439117 KRTAP10-1P60331 282 aa8.89□□□□□ -0.99
TSC2-206ENST00000439117 KRTAP10-2P60368 255 aa8.89□□□□□ -0.99
TSC2-206ENST00000439117 KRTAP25-1Q3LHN0 102 aa8.88□□□□□ -0.99
TSC2-206ENST00000439117 KMT2BQ9UMN6 2715 aaPredicted RBP8.86□□□□□ -0.99
TSC2-206ENST00000439117 NIPBLQ6KC79 2804 aaeCLIP8.85□□□□□ -0.99
TSC2-206ENST00000439117 DMBT1Q9UGM3 2413 aaPredicted RBP8.84□□□□□ -0.99
TSC2-206ENST00000439117 DMXL1Q9Y485 3027 aa8.84□□□□□ -0.99
TSC2-206ENST00000439117 TENM4Q6N022 2769 aa8.84□□□□□ -0.99
TSC2-206ENST00000439117 A0A087X002 238 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 137.2 ms