RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 HIST1H4AP62805 103 aaKnown RBP12.08□□□□□ -0.48
VRK2-205ENST00000432057 HAMPP81172 84 aa12.08□□□□□ -0.48
VRK2-205ENST00000432057 KRTAP13-1Q8IUC0 172 aa12.08□□□□□ -0.48
VRK2-205ENST00000432057 PLAC8Q9NZF1 115 aa12.08□□□□□ -0.48
VRK2-205ENST00000432057 F8WEM9 126 aa12.07□□□□□ -0.48
VRK2-205ENST00000432057 DNAH5Q8TE73 4624 aa12.06□□□□□ -0.48
VRK2-205ENST00000432057 KRTAP10-2P60368 255 aa12.04□□□□□ -0.48
VRK2-205ENST00000432057 Q8NBF4 154 aa12.04□□□□□ -0.48
VRK2-205ENST00000432057 SCXQ7RTU7 201 aa12.02□□□□□ -0.48
VRK2-205ENST00000432057 A0A0G2JQZ4 141 aa12.02□□□□□ -0.49
VRK2-205ENST00000432057 SPRR1BP22528 89 aa12.02□□□□□ -0.49
VRK2-205ENST00000432057 PKD1P98161 4303 aa12.01□□□□□ -0.49
VRK2-205ENST00000432057 PSORS1C2Q9UIG4 136 aa12.01□□□□□ -0.49
VRK2-205ENST00000432057 CXCL6P80162 114 aa12□□□□□ -0.49
VRK2-205ENST00000432057 IGFL1Q6UW32 110 aa12□□□□□ -0.49
VRK2-205ENST00000432057 FAT2Q9NYQ8 4349 aa11.99□□□□□ -0.49
VRK2-205ENST00000432057 NREPQ16612 68 aa11.99□□□□□ -0.49
VRK2-205ENST00000432057 IGLV8-61A0A075B6I0 122 aa11.98□□□□□ -0.49
VRK2-205ENST00000432057 SPRR4Q96PI1 79 aa11.98□□□□□ -0.49
VRK2-205ENST00000432057 A0A1B0GW54 56 aa11.96□□□□□ -0.49
VRK2-205ENST00000432057 CCDC179H3BU77 68 aa11.95□□□□□ -0.5
VRK2-205ENST00000432057 ATOX1O00244 68 aa11.95□□□□□ -0.5
VRK2-205ENST00000432057 FAM30AQ9NZY2 134 aa11.94□□□□□ -0.5
VRK2-205ENST00000432057 CRYGAP11844 174 aa11.93□□□□□ -0.5
VRK2-205ENST00000432057 SACSQ9NZJ4 4579 aa11.91□□□□□ -0.5
VRK2-205ENST00000432057 BPY2O14599 106 aa11.89□□□□□ -0.51
VRK2-205ENST00000432057 Q8N9L7 120 aa11.89□□□□□ -0.51
VRK2-205ENST00000432057 CIRBP-AS1Q8TBR5 109 aa11.89□□□□□ -0.51
VRK2-205ENST00000432057 LCE6AA0A183 80 aa11.88□□□□□ -0.51
VRK2-205ENST00000432057 KRTAP10-1P60331 282 aa11.88□□□□□ -0.51
VRK2-205ENST00000432057 ZNF861PO60384 105 aa11.87□□□□□ -0.51
VRK2-205ENST00000432057 IGKV4-1P06312 121 aa11.85□□□□□ -0.51
VRK2-205ENST00000432057 LINC00483Q53H64 154 aa11.85□□□□□ -0.51
VRK2-205ENST00000432057 Q6ZSA8 131 aa11.85□□□□□ -0.51
VRK2-205ENST00000432057 ZNF706Q9Y5V0 76 aaPredicted RBP11.85□□□□□ -0.51
VRK2-205ENST00000432057 A0A087WSZ3 146 aa11.84□□□□□ -0.51
VRK2-205ENST00000432057 IGLV9-49A0A0B4J1Y8 123 aa11.83□□□□□ -0.52
VRK2-205ENST00000432057 IGLV7-43P04211 117 aa11.83□□□□□ -0.52
VRK2-205ENST00000432057 COX7CP15954 63 aa11.82□□□□□ -0.52
VRK2-205ENST00000432057 C9orf153Q5TBE3 101 aa11.81□□□□□ -0.52
VRK2-205ENST00000432057 UQCRQO14949 82 aa11.8□□□□□ -0.52
VRK2-205ENST00000432057 SERP2Q8N6R1 65 aa11.8□□□□□ -0.52
VRK2-205ENST00000432057 ANAPC11Q9NYG5 84 aa11.78□□□□□ -0.52
VRK2-205ENST00000432057 DSCR10P59022 87 aa11.76□□□□□ -0.53
VRK2-205ENST00000432057 DEFB116Q30KQ4 102 aa11.74□□□□□ -0.53
VRK2-205ENST00000432057 MOBPQ13875 183 aa11.73□□□□□ -0.53
VRK2-205ENST00000432057 LRP1BQ9NZR2 4599 aa11.73□□□□□ -0.53
VRK2-205ENST00000432057 K7EQZ3 153 aa11.72□□□□□ -0.53
VRK2-205ENST00000432057 RPL37AP61513 92 aaKnown RBP11.7□□□□□ -0.54
VRK2-205ENST00000432057 LINC00336Q6ZUF6 198 aa11.69□□□□□ -0.54
VRK2-205ENST00000432057 TRAV7A0A075B6U4 112 aa11.68□□□□□ -0.54
VRK2-205ENST00000432057 HRCT1Q6UXD1 115 aa11.68□□□□□ -0.54
VRK2-205ENST00000432057 PKHD1P08F94 4074 aa11.67□□□□□ -0.54
VRK2-205ENST00000432057 SMIM20Q8N5G0 67 aa11.66□□□□□ -0.54
VRK2-205ENST00000432057 LINC00472Q9H8W2 130 aa11.65□□□□□ -0.54
VRK2-205ENST00000432057 CYSTM1Q9H1C7 97 aa11.63□□□□□ -0.55
VRK2-205ENST00000432057 RYR2Q92736 4967 aa11.63□□□□□ -0.55
VRK2-205ENST00000432057 SS18L2Q9UHA2 77 aa11.61□□□□□ -0.55
VRK2-205ENST00000432057 DYNC1H1Q14204 4646 aaKnown RBP11.6□□□□□ -0.55
VRK2-205ENST00000432057 KMT2CQ8NEZ4 4911 aaKnown RBP11.58□□□□□ -0.56
VRK2-205ENST00000432057 A0A1B0GVY2 172 aa11.58□□□□□ -0.56
VRK2-205ENST00000432057 C20orf197Q8N268 126 aa11.58□□□□□ -0.56
VRK2-205ENST00000432057 VPS13BQ7Z7G8 4022 aa11.57□□□□□ -0.56
VRK2-205ENST00000432057 HCG22E2RYF7 251 aa11.57□□□□□ -0.56
VRK2-205ENST00000432057 Q96NJ1 140 aa11.57□□□□□ -0.56
VRK2-205ENST00000432057 OCR1Q9BZK8 76 aa11.57□□□□□ -0.56
VRK2-205ENST00000432057 A8MWP4 228 aa11.55□□□□□ -0.56
VRK2-205ENST00000432057 A0A087X002 238 aa11.53□□□□□ -0.56
VRK2-205ENST00000432057 PRR15Q8IV56 129 aa11.53□□□□□ -0.56
VRK2-205ENST00000432057 J3KT08 172 aa11.53□□□□□ -0.56
VRK2-205ENST00000432057 WFDC13Q8IUB5 93 aa11.53□□□□□ -0.56
VRK2-205ENST00000432057 KRTAP13-2Q52LG2 175 aa11.5□□□□□ -0.57
VRK2-205ENST00000432057 SSBP3-AS1Q7Z2R9 100 aa11.49□□□□□ -0.57
VRK2-205ENST00000432057 SNURFQ9Y675 71 aa11.49□□□□□ -0.57
VRK2-205ENST00000432057 KRTAP1-4P0C5Y4 121 aa11.48□□□□□ -0.57
VRK2-205ENST00000432057 FAM229BQ4G0N7 80 aa11.48□□□□□ -0.57
VRK2-205ENST00000432057 KRTAP29-1A8MX34 341 aaPredicted RBP11.46□□□□□ -0.58
VRK2-205ENST00000432057 KLKP1Q107X0 134 aa11.46□□□□□ -0.58
VRK2-205ENST00000432057 APOBP04114 4563 aaKnown RBP11.46□□□□□ -0.58
VRK2-205ENST00000432057 CD164Q04900 197 aa11.45□□□□□ -0.58
VRK2-205ENST00000432057 NDUFB1O75438 58 aa11.44□□□□□ -0.58
VRK2-205ENST00000432057 CASC2Q6XLA1 102 aa11.44□□□□□ -0.58
VRK2-205ENST00000432057 TMEM254Q8TBM7 123 aa11.44□□□□□ -0.58
VRK2-205ENST00000432057 MMP24-AS1A0A0U1RRL7 71 aa11.43□□□□□ -0.58
VRK2-205ENST00000432057 SMR3BP02814 79 aaPredicted RBP11.43□□□□□ -0.58
VRK2-205ENST00000432057 TMEM258P61165 79 aa11.41□□□□□ -0.58
VRK2-205ENST00000432057 A0A0U1RQV1 116 aa11.38□□□□□ -0.59
VRK2-205ENST00000432057 A0A1B0GVX0 72 aa11.38□□□□□ -0.59
VRK2-205ENST00000432057 H7BZZ5 65 aa11.38□□□□□ -0.59
VRK2-205ENST00000432057 SPINK6Q6UWN8 80 aa11.38□□□□□ -0.59
VRK2-205ENST00000432057 IGHV6-1A0A0B4J1U7 121 aa11.36□□□□□ -0.59
VRK2-205ENST00000432057 CDK2AP2O75956 126 aa11.36□□□□□ -0.59
VRK2-205ENST00000432057 PLA2G1BP04054 148 aaKnown RBP11.36□□□□□ -0.59
VRK2-205ENST00000432057 C8orf17Q9NRJ1 99 aa11.35□□□□□ -0.59
VRK2-205ENST00000432057 hDV103S1A0JD37 113 aa11.34□□□□□ -0.59
VRK2-205ENST00000432057 ASB16-AS1Q495Z4 193 aa11.32□□□□□ -0.6
VRK2-205ENST00000432057 RYR3Q15413 4870 aa11.32□□□□□ -0.6
VRK2-205ENST00000432057 FAT1Q14517 4588 aa11.31□□□□□ -0.6
VRK2-205ENST00000432057 KRTAP10-4P60372 401 aaPredicted RBP11.29□□□□□ -0.6
VRK2-205ENST00000432057 C5orf47Q569G3 176 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 118.7 ms