RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 A0A0C4DFX4 3053 aa5.64□□□□□ -1.51
CTNND1-208ENST00000428599 CDH23Q9H251 3354 aa5.64□□□□□ -1.51
CTNND1-208ENST00000428599 CFAP54Q96N23 3096 aa5.64□□□□□ -1.51
CTNND1-208ENST00000428599 AKAP13Q12802 2813 aa5.64□□□□□ -1.51
CTNND1-208ENST00000428599 H3BS24 57 aa5.63□□□□□ -1.51
CTNND1-208ENST00000428599 H7BZZ5 65 aa5.63□□□□□ -1.51
CTNND1-208ENST00000428599 XIRP2A4UGR9 3374 aa5.62□□□□□ -1.51
CTNND1-208ENST00000428599 SEC61BP60468 96 aaKnown RBP5.62□□□□□ -1.51
CTNND1-208ENST00000428599 WIPF1O43516 503 aa5.61□□□□□ -1.51
CTNND1-208ENST00000428599 ZCCHC13Q8WW36 166 aaKnown RBP5.6□□□□□ -1.51
CTNND1-208ENST00000428599 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.59□□□□□ -1.51
CTNND1-208ENST00000428599 TEP1Q99973 2627 aaKnown RBP5.59□□□□□ -1.51
CTNND1-208ENST00000428599 DMAC1Q96GE9 116 aa5.59□□□□□ -1.51
CTNND1-208ENST00000428599 DSPP15924 2871 aaKnown RBP5.58□□□□□ -1.52
CTNND1-208ENST00000428599 R4GN34 69 aa5.57□□□□□ -1.52
CTNND1-208ENST00000428599 PLAC8Q9NZF1 115 aa5.56□□□□□ -1.52
CTNND1-208ENST00000428599 TRIOO75962 3097 aa5.55□□□□□ -1.52
CTNND1-208ENST00000428599 IGSF10Q6WRI0 2623 aa5.54□□□□□ -1.52
CTNND1-208ENST00000428599 TEX15Q9BXT5 2789 aa5.53□□□□□ -1.52
CTNND1-208ENST00000428599 Q5VSD8 79 aa5.53□□□□□ -1.52
CTNND1-208ENST00000428599 SZT2Q5T011 3432 aa5.52□□□□□ -1.53
CTNND1-208ENST00000428599 BAHCC1Q9P281 2608 aa5.51□□□□□ -1.53
CTNND1-208ENST00000428599 PLAC4Q8WY50 150 aa5.51□□□□□ -1.53
CTNND1-208ENST00000428599 OCR1Q9BZK8 76 aa5.51□□□□□ -1.53
CTNND1-208ENST00000428599 VPS13AQ96RL7 3174 aa5.51□□□□□ -1.53
CTNND1-208ENST00000428599 UNC79Q9P2D8 2635 aa5.49□□□□□ -1.53
CTNND1-208ENST00000428599 SPINK7P58062 85 aa5.49□□□□□ -1.53
CTNND1-208ENST00000428599 SETXQ7Z333 2677 aaKnown RBP5.48□□□□□ -1.53
CTNND1-208ENST00000428599 Q75L30 129 aa5.48□□□□□ -1.53
CTNND1-208ENST00000428599 CHD6Q8TD26 2715 aa5.48□□□□□ -1.53
CTNND1-208ENST00000428599 MMP24-AS1A0A0U1RRL7 71 aa5.47□□□□□ -1.53
CTNND1-208ENST00000428599 COL6A5A8TX70 2615 aa5.47□□□□□ -1.53
CTNND1-208ENST00000428599 Q8N9P0 234 aaPredicted RBP5.47□□□□□ -1.53
CTNND1-208ENST00000428599 OXTP01178 125 aa5.46□□□□□ -1.54
CTNND1-208ENST00000428599 LCE6AA0A183 80 aa5.45□□□□□ -1.54
CTNND1-208ENST00000428599 Q5W150 140 aa5.45□□□□□ -1.54
CTNND1-208ENST00000428599 LINC01558Q9Y6Z2 57 aa5.45□□□□□ -1.54
CTNND1-208ENST00000428599 M0QZ58 72 aa5.44□□□□□ -1.54
CTNND1-208ENST00000428599 STAB1Q9NY15 2570 aa5.44□□□□□ -1.54
CTNND1-208ENST00000428599 CELSR3Q9NYQ7 3312 aa5.43□□□□□ -1.54
CTNND1-208ENST00000428599 MAP1AP78559 2803 aaPredicted RBP5.43□□□□□ -1.54
CTNND1-208ENST00000428599 PRAC1Q96KF2 57 aa5.42□□□□□ -1.54
CTNND1-208ENST00000428599 FP248Q71RG6 208 aaPredicted RBP5.41□□□□□ -1.54
CTNND1-208ENST00000428599 KRTAP1-5Q9BYS1 174 aa5.41□□□□□ -1.54
CTNND1-208ENST00000428599 LAMA1P25391 3075 aa5.4□□□□□ -1.54
CTNND1-208ENST00000428599 H1FX-AS1Q4G0G2 97 aa5.4□□□□□ -1.54
CTNND1-208ENST00000428599 RPL37P61927 97 aaKnown RBP5.4□□□□□ -1.54
CTNND1-208ENST00000428599 SPRR1BP22528 89 aa5.39□□□□□ -1.55
CTNND1-208ENST00000428599 SPRR1AP35321 89 aa5.39□□□□□ -1.55
CTNND1-208ENST00000428599 FRYQ5TBA9 3013 aa5.38□□□□□ -1.55
CTNND1-208ENST00000428599 VCANP13611 3396 aa5.38□□□□□ -1.55
CTNND1-208ENST00000428599 COL6A3P12111 3177 aa5.38□□□□□ -1.55
CTNND1-208ENST00000428599 ROMO1P60602 79 aa5.38□□□□□ -1.55
CTNND1-208ENST00000428599 NOTCH1P46531 2555 aa5.37□□□□□ -1.55
CTNND1-208ENST00000428599 DNAH14Q0VDD8 3507 aa5.36□□□□□ -1.55
CTNND1-208ENST00000428599 KRTAP10-1P60331 282 aa5.36□□□□□ -1.55
CTNND1-208ENST00000428599 LINC00472Q9H8W2 130 aa5.36□□□□□ -1.55
CTNND1-208ENST00000428599 TNRC18O15417 2968 aaPredicted RBP5.36□□□□□ -1.55
CTNND1-208ENST00000428599 GCN1Q92616 2671 aaKnown RBP5.36□□□□□ -1.55
CTNND1-208ENST00000428599 Q8NDZ9 215 aa5.36□□□□□ -1.55
CTNND1-208ENST00000428599 FRYLO94915 3013 aa5.34□□□□□ -1.55
CTNND1-208ENST00000428599 ADM2Q7Z4H4 148 aa5.34□□□□□ -1.55
CTNND1-208ENST00000428599 UBR5O95071 2799 aaPredicted RBP5.33□□□□□ -1.56
CTNND1-208ENST00000428599 KRTAP26-1Q6PEX3 210 aa5.32□□□□□ -1.56
CTNND1-208ENST00000428599 KRTAP10-2P60368 255 aa5.32□□□□□ -1.56
CTNND1-208ENST00000428599 ITPR2Q14571 2701 aa5.32□□□□□ -1.56
CTNND1-208ENST00000428599 ATMQ13315 3056 aa5.32□□□□□ -1.56
CTNND1-208ENST00000428599 FLNCQ14315 2725 aa5.3□□□□□ -1.56
CTNND1-208ENST00000428599 KRTAP16-1A8MUX0 517 aa5.3□□□□□ -1.56
CTNND1-208ENST00000428599 DMXL2Q8TDJ6 3036 aa5.3□□□□□ -1.56
CTNND1-208ENST00000428599 COL12A1Q99715 3063 aa5.29□□□□□ -1.56
CTNND1-208ENST00000428599 BOD1L1Q8NFC6 3051 aa5.29□□□□□ -1.56
CTNND1-208ENST00000428599 SPTBN5Q9NRC6 3674 aaKnown RBP5.28□□□□□ -1.56
CTNND1-208ENST00000428599 NBEAL2Q6ZNJ1 2754 aa5.28□□□□□ -1.56
CTNND1-208ENST00000428599 Q5VV11 94 aa5.28□□□□□ -1.56
CTNND1-208ENST00000428599 ITPR1Q14643 2758 aa5.27□□□□□ -1.57
CTNND1-208ENST00000428599 NBEAL1Q6ZS30 2694 aa5.27□□□□□ -1.57
CTNND1-208ENST00000428599 Q6ZR54 194 aa5.26□□□□□ -1.57
CTNND1-208ENST00000428599 Q5XG85 94 aa5.26□□□□□ -1.57
CTNND1-208ENST00000428599 TACC2O95359 2948 aa5.25□□□□□ -1.57
CTNND1-208ENST00000428599 PANO1I0J062 215 aa5.24□□□□□ -1.57
CTNND1-208ENST00000428599 ADGRG4Q8IZF6 3080 aa5.23□□□□□ -1.57
CTNND1-208ENST00000428599 UTP20O75691 2785 aaKnown RBP5.23□□□□□ -1.57
CTNND1-208ENST00000428599 LRBAP50851 2863 aa5.22□□□□□ -1.57
CTNND1-208ENST00000428599 KALRNO60229 2985 aa5.22□□□□□ -1.57
CTNND1-208ENST00000428599 SPATA8Q6RVD6 105 aa5.22□□□□□ -1.57
CTNND1-208ENST00000428599 EYSQ5T1H1 3165 aa5.21□□□□□ -1.58
CTNND1-208ENST00000428599 HIVEP1P15822 2718 aa5.2□□□□□ -1.58
CTNND1-208ENST00000428599 NSD1Q96L73 2696 aaPredicted RBP5.2□□□□□ -1.58
CTNND1-208ENST00000428599 FREM2Q5SZK8 3169 aa5.18□□□□□ -1.58
CTNND1-208ENST00000428599 DMXL1Q9Y485 3027 aa5.18□□□□□ -1.58
CTNND1-208ENST00000428599 KMT2BQ9UMN6 2715 aaPredicted RBP5.18□□□□□ -1.58
CTNND1-208ENST00000428599 RPS29P62273 56 aaKnown RBP5.18□□□□□ -1.58
CTNND1-208ENST00000428599 C20orf166-AS1Q96NR2 134 aa5.17□□□□□ -1.58
CTNND1-208ENST00000428599 USP34Q70CQ2 3546 aa5.17□□□□□ -1.58
CTNND1-208ENST00000428599 REV3LO60673 3130 aa5.17□□□□□ -1.58
CTNND1-208ENST00000428599 A8MUU9 505 aa5.17□□□□□ -1.58
CTNND1-208ENST00000428599 KRTAP21-3Q3LHN1 58 aa5.16□□□□□ -1.58
CTNND1-208ENST00000428599 A0A087X002 238 aa5.16□□□□□ -1.58
CTNND1-208ENST00000428599 ASB16-AS1Q495Z4 193 aa5.15□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 192.4 ms