RNA–Protein interactions for RNA: ENST00000421862.1

AC004540.1-203, humanhuman

TSL 5 BASIC

Gene AC004540.1, Length 907 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-203ENST00000421862 TRBV7-7A0A0K0K1E9 115 aa9.7□□□□□ -0.86
AC004540.1-203ENST00000421862 Q6JHZ5 121 aa9.69□□□□□ -0.86
AC004540.1-203ENST00000421862 Q75L30 129 aa9.69□□□□□ -0.86
AC004540.1-203ENST00000421862 IGFL1Q6UW32 110 aa9.68□□□□□ -0.86
AC004540.1-203ENST00000421862 LINC00575Q6W349 94 aa9.68□□□□□ -0.86
AC004540.1-203ENST00000421862 ATOH7Q8N100 152 aa9.68□□□□□ -0.86
AC004540.1-203ENST00000421862 Q6ZQY7 126 aa9.67□□□□□ -0.86
AC004540.1-203ENST00000421862 SNRPEP62304 92 aaKnown RBP9.66□□□□□ -0.86
AC004540.1-203ENST00000421862 OBSCN-AS1Q96MR7 158 aa9.65□□□□□ -0.86
AC004540.1-203ENST00000421862 hADV29S1A0JD25 119 aa9.63□□□□□ -0.87
AC004540.1-203ENST00000421862 VAMP3Q15836 100 aa9.63□□□□□ -0.87
AC004540.1-203ENST00000421862 ATP11AUNQ6ZP68 121 aa9.63□□□□□ -0.87
AC004540.1-203ENST00000421862 OCIAD2Q56VL3 154 aa9.61□□□□□ -0.87
AC004540.1-203ENST00000421862 PPDPFLQ8WWR9 84 aa9.59□□□□□ -0.87
AC004540.1-203ENST00000421862 S100A2P29034 98 aa9.58□□□□□ -0.88
AC004540.1-203ENST00000421862 Q6Q795 121 aa9.58□□□□□ -0.88
AC004540.1-203ENST00000421862 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.58□□□□□ -0.88
AC004540.1-203ENST00000421862 HSBP1L1C9JCN9 74 aa9.57□□□□□ -0.88
AC004540.1-203ENST00000421862 USH2AO75445 5202 aa9.57□□□□□ -0.88
AC004540.1-203ENST00000421862 SSPOA2VEC9 5147 aa9.56□□□□□ -0.88
AC004540.1-203ENST00000421862 HIST3H2BBQ8N257 126 aa9.56□□□□□ -0.88
AC004540.1-203ENST00000421862 HIST1H2BLQ99880 126 aa9.56□□□□□ -0.88
AC004540.1-203ENST00000421862 KRTAP9-8Q9BYQ0 159 aa9.56□□□□□ -0.88
AC004540.1-203ENST00000421862 CFC1P0CG37 223 aa9.55□□□□□ -0.88
AC004540.1-203ENST00000421862 C20orf166-AS1Q96NR2 134 aa9.55□□□□□ -0.88
AC004540.1-203ENST00000421862 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.54□□□□□ -0.88
AC004540.1-203ENST00000421862 LST1O00453 97 aa9.54□□□□□ -0.88
AC004540.1-203ENST00000421862 A8MUU9 505 aa9.52□□□□□ -0.89
AC004540.1-203ENST00000421862 SCGB1D1O95968 90 aa9.52□□□□□ -0.89
AC004540.1-203ENST00000421862 Q96NJ1 140 aa9.52□□□□□ -0.89
AC004540.1-203ENST00000421862 H3BUT2 72 aa9.51□□□□□ -0.89
AC004540.1-203ENST00000421862 S100A6P06703 90 aa9.51□□□□□ -0.89
AC004540.1-203ENST00000421862 BVES-AS1Q5T3Y7 98 aa9.51□□□□□ -0.89
AC004540.1-203ENST00000421862 S100A1P23297 94 aa9.5□□□□□ -0.89
AC004540.1-203ENST00000421862 SS18L2Q9UHA2 77 aa9.5□□□□□ -0.89
AC004540.1-203ENST00000421862 KRTAP9-7A8MTY7 169 aa9.49□□□□□ -0.89
AC004540.1-203ENST00000421862 SNHG12Q9BXW3 62 aa9.48□□□□□ -0.89
AC004540.1-203ENST00000421862 C12orf57Q99622 126 aa9.45□□□□□ -0.9
AC004540.1-203ENST00000421862 TEN1Q86WV5 123 aa9.44□□□□□ -0.9
AC004540.1-203ENST00000421862 TRBV20-1A0A075B6N2 111 aa9.41□□□□□ -0.9
AC004540.1-203ENST00000421862 HIST1H4GQ99525 98 aa9.41□□□□□ -0.9
AC004540.1-203ENST00000421862 A0A087WSZ3 146 aa9.39□□□□□ -0.91
AC004540.1-203ENST00000421862 MT2AP02795 61 aa9.39□□□□□ -0.91
AC004540.1-203ENST00000421862 COX8AP10176 69 aa9.39□□□□□ -0.91
AC004540.1-203ENST00000421862 NDUFV3P56181 108 aaKnown RBP9.37□□□□□ -0.91
AC004540.1-203ENST00000421862 FCGBPQ9Y6R7 5405 aaPredicted RBP9.37□□□□□ -0.91
AC004540.1-203ENST00000421862 DLEU1O43261 78 aa9.36□□□□□ -0.91
AC004540.1-203ENST00000421862 DSCR10P59022 87 aa9.36□□□□□ -0.91
AC004540.1-203ENST00000421862 FAM218AQ96MZ4 157 aa9.36□□□□□ -0.91
AC004540.1-203ENST00000421862 KRTAP16-1A8MUX0 517 aa9.35□□□□□ -0.91
AC004540.1-203ENST00000421862 H0YGX0 51 aa9.33□□□□□ -0.92
AC004540.1-203ENST00000421862 MPLKIPQ8TAP9 179 aa9.33□□□□□ -0.92
AC004540.1-203ENST00000421862 A0A0B4J2C4 111 aa9.32□□□□□ -0.92
AC004540.1-203ENST00000421862 MT1FP04733 61 aa9.32□□□□□ -0.92
AC004540.1-203ENST00000421862 SNCGO76070 127 aa9.31□□□□□ -0.92
AC004540.1-203ENST00000421862 H3BMG7 143 aa9.3□□□□□ -0.92
AC004540.1-203ENST00000421862 LCE2BO14633 110 aa9.3□□□□□ -0.92
AC004540.1-203ENST00000421862 RAB37Q96AX2 223 aa9.3□□□□□ -0.92
AC004540.1-203ENST00000421862 SIGMAR1Q99720 223 aa9.3□□□□□ -0.92
AC004540.1-203ENST00000421862 A0A1B0GX51 115 aa9.29□□□□□ -0.92
AC004540.1-203ENST00000421862 A0A1W2PNM2 257 aa9.29□□□□□ -0.92
AC004540.1-203ENST00000421862 HRES1P13985 223 aa9.29□□□□□ -0.92
AC004540.1-203ENST00000421862 HIGD1BQ9P298 99 aa9.29□□□□□ -0.92
AC004540.1-203ENST00000421862 C14orf144Q96I85 54 aa9.28□□□□□ -0.92
AC004540.1-203ENST00000421862 SPATA45Q537H7 98 aa9.27□□□□□ -0.93
AC004540.1-203ENST00000421862 KRTAP9-3Q9BYQ3 159 aa9.27□□□□□ -0.93
AC004540.1-203ENST00000421862 PAM16Q9Y3D7 125 aa9.27□□□□□ -0.93
AC004540.1-203ENST00000421862 FAM236DA0A1B0GTK5 79 aa9.26□□□□□ -0.93
AC004540.1-203ENST00000421862 GHRHP01286 108 aa9.26□□□□□ -0.93
AC004540.1-203ENST00000421862 FAM236CP0DP71 79 aa9.26□□□□□ -0.93
AC004540.1-203ENST00000421862 LINC00313P59037 77 aa9.26□□□□□ -0.93
AC004540.1-203ENST00000421862 KRTAP19-1Q8IUB9 90 aa9.26□□□□□ -0.93
AC004540.1-203ENST00000421862 VAMP8Q9BV40 100 aa9.25□□□□□ -0.93
AC004540.1-203ENST00000421862 RBM12B-AS1Q9P1G2 102 aa9.23□□□□□ -0.93
AC004540.1-203ENST00000421862 TRBV7-4A0A0J9YYF1 115 aa9.22□□□□□ -0.93
AC004540.1-203ENST00000421862 IGKV4-1P06312 121 aa9.22□□□□□ -0.93
AC004540.1-203ENST00000421862 FABP2P12104 132 aa9.22□□□□□ -0.93
AC004540.1-203ENST00000421862 TMEM238LA0A1B0GVL6 79 aa9.21□□□□□ -0.94
AC004540.1-203ENST00000421862 A6NJY4 79 aa9.21□□□□□ -0.94
AC004540.1-203ENST00000421862 C2orf91Q6ZV80 131 aa9.21□□□□□ -0.94
AC004540.1-203ENST00000421862 NOTCH2NLQ7Z3S9 236 aa9.21□□□□□ -0.94
AC004540.1-203ENST00000421862 CEND1Q8N111 149 aa9.19□□□□□ -0.94
AC004540.1-203ENST00000421862 KRTAP10-10P60014 251 aa9.18□□□□□ -0.94
AC004540.1-203ENST00000421862 LINC00472Q9H8W2 130 aa9.18□□□□□ -0.94
AC004540.1-203ENST00000421862 MACF1Q9UPN3 7388 aaKnown RBP9.18□□□□□ -0.94
AC004540.1-203ENST00000421862 PRO1854Q9UHT4 67 aa9.17□□□□□ -0.94
AC004540.1-203ENST00000421862 TRIAP1O43715 76 aa9.16□□□□□ -0.94
AC004540.1-203ENST00000421862 ANKRD29Q8N6D5 301 aa9.15□□□□□ -0.94
AC004540.1-203ENST00000421862 SYNE2Q8WXH0 6885 aaKnown RBP9.13□□□□□ -0.95
AC004540.1-203ENST00000421862 FXYD2P54710 66 aa9.12□□□□□ -0.95
AC004540.1-203ENST00000421862 ORMDL1Q9P0S3 153 aa9.12□□□□□ -0.95
AC004540.1-203ENST00000421862 IGHV6-1A0A0B4J1U7 121 aa9.11□□□□□ -0.95
AC004540.1-203ENST00000421862 H3BQ85 93 aa9.11□□□□□ -0.95
AC004540.1-203ENST00000421862 DEFB116Q30KQ4 102 aa9.11□□□□□ -0.95
AC004540.1-203ENST00000421862 A0A1B0GV72 72 aa9.09□□□□□ -0.95
AC004540.1-203ENST00000421862 DNAL4O96015 105 aa9.09□□□□□ -0.95
AC004540.1-203ENST00000421862 CCKP06307 115 aa9.09□□□□□ -0.95
AC004540.1-203ENST00000421862 C8orf87E5RJ46 101 aa9.08□□□□□ -0.96
AC004540.1-203ENST00000421862 TRACP01848 142 aa9.08□□□□□ -0.96
AC004540.1-203ENST00000421862 HSD52Q0P140 79 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms