RNA–Protein interactions for RNA: ENST00000419205.5

FAM3A-208, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2 BASIC

Gene FAM3A, Length 1,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-208ENST00000419205 UBE2AP49459 152 aa12.84□□□□□ -0.35
FAM3A-208ENST00000419205 SMIM20Q8N5G0 67 aa12.84□□□□□ -0.35
FAM3A-208ENST00000419205 IGKV4-1P06312 121 aa12.84□□□□□ -0.35
FAM3A-208ENST00000419205 DPH3Q96FX2 82 aa12.84□□□□□ -0.35
FAM3A-208ENST00000419205 IGFL1Q6UW32 110 aa12.83□□□□□ -0.36
FAM3A-208ENST00000419205 RTL8CO15255 209 aa12.82□□□□□ -0.36
FAM3A-208ENST00000419205 KRTAP13-1Q8IUC0 172 aa12.82□□□□□ -0.36
FAM3A-208ENST00000419205 TRAV7A0A075B6U4 112 aa12.81□□□□□ -0.36
FAM3A-208ENST00000419205 C1orf134Q5TEV5 83 aa12.78□□□□□ -0.36
FAM3A-208ENST00000419205 Q8N9L7 120 aa12.78□□□□□ -0.36
FAM3A-208ENST00000419205 CYSTM1Q9H1C7 97 aa12.74□□□□□ -0.37
FAM3A-208ENST00000419205 A0A0G2JQZ4 141 aa12.74□□□□□ -0.37
FAM3A-208ENST00000419205 PLAC8Q9NZF1 115 aa12.73□□□□□ -0.37
FAM3A-208ENST00000419205 LY6G6CO95867 125 aa12.71□□□□□ -0.37
FAM3A-208ENST00000419205 IGLV5-52A0A0A0MRZ9 124 aa12.71□□□□□ -0.38
FAM3A-208ENST00000419205 DSCR10P59022 87 aa12.69□□□□□ -0.38
FAM3A-208ENST00000419205 C20orf197Q8N268 126 aa12.67□□□□□ -0.38
FAM3A-208ENST00000419205 A0A087WSZ3 146 aa12.66□□□□□ -0.38
FAM3A-208ENST00000419205 TMEM258P61165 79 aa12.66□□□□□ -0.38
FAM3A-208ENST00000419205 HECTD4Q9Y4D8 3996 aa12.66□□□□□ -0.38
FAM3A-208ENST00000419205 WWC2-AS2Q96NR7 200 aa12.65□□□□□ -0.38
FAM3A-208ENST00000419205 KMT2AQ03164 3969 aa12.65□□□□□ -0.38
FAM3A-208ENST00000419205 PSORS1C2Q9UIG4 136 aa12.64□□□□□ -0.39
FAM3A-208ENST00000419205 DNAH17Q9UFH2 4485 aa12.63□□□□□ -0.39
FAM3A-208ENST00000419205 LINC00483Q53H64 154 aa12.63□□□□□ -0.39
FAM3A-208ENST00000419205 KLKP1Q107X0 134 aa12.62□□□□□ -0.39
FAM3A-208ENST00000419205 K7EQZ3 153 aa12.61□□□□□ -0.39
FAM3A-208ENST00000419205 OCR1Q9BZK8 76 aa12.61□□□□□ -0.39
FAM3A-208ENST00000419205 DNAH6Q9C0G6 4158 aa12.61□□□□□ -0.39
FAM3A-208ENST00000419205 ZNF706Q9Y5V0 76 aaPredicted RBP12.61□□□□□ -0.39
FAM3A-208ENST00000419205 DNAH2Q9P225 4427 aa12.6□□□□□ -0.39
FAM3A-208ENST00000419205 SRRM2Q9UQ35 2752 aaKnown RBP12.59□□□□□ -0.39
FAM3A-208ENST00000419205 TGP01266 2768 aa12.59□□□□□ -0.39
FAM3A-208ENST00000419205 ZNF861PO60384 105 aa12.56□□□□□ -0.4
FAM3A-208ENST00000419205 RPL37AP61513 92 aaKnown RBP12.56□□□□□ -0.4
FAM3A-208ENST00000419205 DEFB116Q30KQ4 102 aa12.53□□□□□ -0.4
FAM3A-208ENST00000419205 HCG22E2RYF7 251 aa12.52□□□□□ -0.41
FAM3A-208ENST00000419205 H7BZZ5 65 aa12.52□□□□□ -0.41
FAM3A-208ENST00000419205 LINC00472Q9H8W2 130 aa12.52□□□□□ -0.41
FAM3A-208ENST00000419205 IGLV9-49A0A0B4J1Y8 123 aa12.51□□□□□ -0.41
FAM3A-208ENST00000419205 SNURFQ9Y675 71 aa12.51□□□□□ -0.41
FAM3A-208ENST00000419205 TMEM254Q8TBM7 123 aa12.51□□□□□ -0.41
FAM3A-208ENST00000419205 KRTAP10-2P60368 255 aa12.49□□□□□ -0.41
FAM3A-208ENST00000419205 ALMS1Q8TCU4 4167 aa12.49□□□□□ -0.41
FAM3A-208ENST00000419205 NDUFC1O43677 76 aa12.48□□□□□ -0.41
FAM3A-208ENST00000419205 RPS28P62857 69 aaKnown RBP12.48□□□□□ -0.41
FAM3A-208ENST00000419205 IGLV7-43P04211 117 aa12.46□□□□□ -0.41
FAM3A-208ENST00000419205 FAM30AQ9NZY2 134 aa12.46□□□□□ -0.41
FAM3A-208ENST00000419205 LCE6AA0A183 80 aa12.46□□□□□ -0.42
FAM3A-208ENST00000419205 J3KT08 172 aa12.46□□□□□ -0.42
FAM3A-208ENST00000419205 A0A0U1RQV1 116 aa12.45□□□□□ -0.42
FAM3A-208ENST00000419205 A8MWP4 228 aa12.45□□□□□ -0.42
FAM3A-208ENST00000419205 PRR15Q8IV56 129 aa12.43□□□□□ -0.42
FAM3A-208ENST00000419205 FAM236DA0A1B0GTK5 79 aa12.43□□□□□ -0.42
FAM3A-208ENST00000419205 FAM236CP0DP71 79 aa12.43□□□□□ -0.42
FAM3A-208ENST00000419205 CIRBP-AS1Q8TBR5 109 aa12.43□□□□□ -0.42
FAM3A-208ENST00000419205 MOBPQ13875 183 aa12.41□□□□□ -0.42
FAM3A-208ENST00000419205 DNAH8Q96JB1 4490 aa12.41□□□□□ -0.42
FAM3A-208ENST00000419205 Q6ZSA8 131 aa12.41□□□□□ -0.42
FAM3A-208ENST00000419205 FRAS1Q86XX4 4008 aa12.4□□□□□ -0.42
FAM3A-208ENST00000419205 KRTAP29-1A8MX34 341 aaPredicted RBP12.4□□□□□ -0.42
FAM3A-208ENST00000419205 ANAPC11Q9NYG5 84 aa12.38□□□□□ -0.43
FAM3A-208ENST00000419205 WFDC13Q8IUB5 93 aa12.38□□□□□ -0.43
FAM3A-208ENST00000419205 Q96NJ1 140 aa12.37□□□□□ -0.43
FAM3A-208ENST00000419205 KRTAP10-1P60331 282 aa12.35□□□□□ -0.43
FAM3A-208ENST00000419205 C5orf47Q569G3 176 aa12.34□□□□□ -0.43
FAM3A-208ENST00000419205 CASC2Q6XLA1 102 aa12.34□□□□□ -0.43
FAM3A-208ENST00000419205 HRCT1Q6UXD1 115 aa12.33□□□□□ -0.44
FAM3A-208ENST00000419205 DNAH11Q96DT5 4516 aa12.32□□□□□ -0.44
FAM3A-208ENST00000419205 ATP5EP56381 51 aaPredicted RBP12.32□□□□□ -0.44
FAM3A-208ENST00000419205 NDUFB1O75438 58 aa12.31□□□□□ -0.44
FAM3A-208ENST00000419205 ZCCHC13Q8WW36 166 aaKnown RBP12.29□□□□□ -0.44
FAM3A-208ENST00000419205 DNAH5Q8TE73 4624 aa12.29□□□□□ -0.44
FAM3A-208ENST00000419205 MMP24-AS1A0A0U1RRL7 71 aa12.28□□□□□ -0.44
FAM3A-208ENST00000419205 OXTP01178 125 aa12.28□□□□□ -0.44
FAM3A-208ENST00000419205 SERP1Q9Y6X1 66 aa12.27□□□□□ -0.45
FAM3A-208ENST00000419205 PKD1P98161 4303 aa12.26□□□□□ -0.45
FAM3A-208ENST00000419205 CD164Q04900 197 aa12.25□□□□□ -0.45
FAM3A-208ENST00000419205 SSBP3-AS1Q7Z2R9 100 aa12.25□□□□□ -0.45
FAM3A-208ENST00000419205 ASB16-AS1Q495Z4 193 aa12.22□□□□□ -0.45
FAM3A-208ENST00000419205 HYDINQ4G0P3 5121 aa12.22□□□□□ -0.45
FAM3A-208ENST00000419205 hDV103S1A0JD37 113 aa12.2□□□□□ -0.46
FAM3A-208ENST00000419205 FAT2Q9NYQ8 4349 aa12.2□□□□□ -0.46
FAM3A-208ENST00000419205 A0A1B0GVX0 72 aa12.2□□□□□ -0.46
FAM3A-208ENST00000419205 MP68P56378 58 aa12.2□□□□□ -0.46
FAM3A-208ENST00000419205 C8orf17Q9NRJ1 99 aa12.18□□□□□ -0.46
FAM3A-208ENST00000419205 CDK2AP2O75956 126 aa12.17□□□□□ -0.46
FAM3A-208ENST00000419205 H3BPC8 53 aa12.16□□□□□ -0.46
FAM3A-208ENST00000419205 FAM229BQ4G0N7 80 aa12.16□□□□□ -0.46
FAM3A-208ENST00000419205 H0Y9P7 68 aa12.13□□□□□ -0.47
FAM3A-208ENST00000419205 IGHV6-1A0A0B4J1U7 121 aa12.13□□□□□ -0.47
FAM3A-208ENST00000419205 A0A087X002 238 aa12.12□□□□□ -0.47
FAM3A-208ENST00000419205 KRTAP13-2Q52LG2 175 aa12.11□□□□□ -0.47
FAM3A-208ENST00000419205 LINC00208Q96KT6 92 aa12.1□□□□□ -0.47
FAM3A-208ENST00000419205 TP53AIP1Q9HCN2 124 aa12.1□□□□□ -0.47
FAM3A-208ENST00000419205 TRAV22A0A0B4J277 110 aa12.09□□□□□ -0.47
FAM3A-208ENST00000419205 LINC00336Q6ZUF6 198 aa12.09□□□□□ -0.47
FAM3A-208ENST00000419205 KRTAP1-4P0C5Y4 121 aa12.07□□□□□ -0.48
FAM3A-208ENST00000419205 Q5XG85 94 aa12.05□□□□□ -0.48
FAM3A-208ENST00000419205 MRPL34Q9BQ48 92 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms