RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 LINC00336Q6ZUF6 198 aa10.3□□□□□ -0.76
SSBP3-205ENST00000417664 Q8NBF4 154 aa10.3□□□□□ -0.76
SSBP3-205ENST00000417664 ZNF706Q9Y5V0 76 aaPredicted RBP10.29□□□□□ -0.76
SSBP3-205ENST00000417664 ZNF861PO60384 105 aa10.28□□□□□ -0.76
SSBP3-205ENST00000417664 SPRR4Q96PI1 79 aa10.28□□□□□ -0.76
SSBP3-205ENST00000417664 IGKV3D-7A0A0C4DH55 119 aa10.28□□□□□ -0.76
SSBP3-205ENST00000417664 CIRBP-AS1Q8TBR5 109 aa10.28□□□□□ -0.76
SSBP3-205ENST00000417664 A0A1W2PNM2 257 aa10.27□□□□□ -0.77
SSBP3-205ENST00000417664 CXCL6P80162 114 aa10.27□□□□□ -0.77
SSBP3-205ENST00000417664 FAM30AQ9NZY2 134 aa10.27□□□□□ -0.77
SSBP3-205ENST00000417664 KRTAP10-1P60331 282 aa10.25□□□□□ -0.77
SSBP3-205ENST00000417664 CRYGAP11844 174 aa10.25□□□□□ -0.77
SSBP3-205ENST00000417664 LINC00483Q53H64 154 aa10.25□□□□□ -0.77
SSBP3-205ENST00000417664 HAMPP81172 84 aa10.24□□□□□ -0.77
SSBP3-205ENST00000417664 NREPQ16612 68 aa10.24□□□□□ -0.77
SSBP3-205ENST00000417664 IGFL1Q6UW32 110 aa10.24□□□□□ -0.77
SSBP3-205ENST00000417664 DNAH11Q96DT5 4516 aa10.23□□□□□ -0.77
SSBP3-205ENST00000417664 SCXQ7RTU7 201 aa10.23□□□□□ -0.77
SSBP3-205ENST00000417664 HYDINQ4G0P3 5121 aa10.23□□□□□ -0.77
SSBP3-205ENST00000417664 IGLV7-43P04211 117 aa10.22□□□□□ -0.77
SSBP3-205ENST00000417664 FAT2Q9NYQ8 4349 aa10.22□□□□□ -0.77
SSBP3-205ENST00000417664 FAM236AA0A1B0GUQ0 79 aa10.2□□□□□ -0.78
SSBP3-205ENST00000417664 FAM236BA0A1B0GV22 79 aa10.2□□□□□ -0.78
SSBP3-205ENST00000417664 RPL37AP61513 92 aaKnown RBP10.2□□□□□ -0.78
SSBP3-205ENST00000417664 DNAH5Q8TE73 4624 aa10.2□□□□□ -0.78
SSBP3-205ENST00000417664 ANAPC13Q9BS18 74 aa10.19□□□□□ -0.78
SSBP3-205ENST00000417664 HIST1H4AP62805 103 aaKnown RBP10.18□□□□□ -0.78
SSBP3-205ENST00000417664 DNAH8Q96JB1 4490 aa10.18□□□□□ -0.78
SSBP3-205ENST00000417664 SACSQ9NZJ4 4579 aa10.18□□□□□ -0.78
SSBP3-205ENST00000417664 PKD1P98161 4303 aa10.17□□□□□ -0.78
SSBP3-205ENST00000417664 BPY2O14599 106 aa10.14□□□□□ -0.79
SSBP3-205ENST00000417664 SRRM2Q9UQ35 2752 aaKnown RBP10.13□□□□□ -0.79
SSBP3-205ENST00000417664 A0A087WVE0 104 aa10.12□□□□□ -0.79
SSBP3-205ENST00000417664 ATOX1O00244 68 aa10.12□□□□□ -0.79
SSBP3-205ENST00000417664 A0A1B0GVY2 172 aa10.1□□□□□ -0.79
SSBP3-205ENST00000417664 C9orf153Q5TBE3 101 aa10.1□□□□□ -0.79
SSBP3-205ENST00000417664 A0A087WSZ3 146 aa10.09□□□□□ -0.79
SSBP3-205ENST00000417664 IGLV9-49A0A0B4J1Y8 123 aa10.09□□□□□ -0.79
SSBP3-205ENST00000417664 A0A0G2JQZ4 141 aa10.09□□□□□ -0.79
SSBP3-205ENST00000417664 IGKV4-1P06312 121 aa10.03□□□□□ -0.8
SSBP3-205ENST00000417664 MOBPQ13875 183 aa10.03□□□□□ -0.8
SSBP3-205ENST00000417664 ANAPC11Q9NYG5 84 aa10.01□□□□□ -0.81
SSBP3-205ENST00000417664 FAM229BQ4G0N7 80 aa10□□□□□ -0.81
SSBP3-205ENST00000417664 SSBP3-AS1Q7Z2R9 100 aa10□□□□□ -0.81
SSBP3-205ENST00000417664 SS18L2Q9UHA2 77 aa10□□□□□ -0.81
SSBP3-205ENST00000417664 DSCR10P59022 87 aa9.99□□□□□ -0.81
SSBP3-205ENST00000417664 SMIM20Q8N5G0 67 aa9.99□□□□□ -0.81
SSBP3-205ENST00000417664 UQCRQO14949 82 aa9.98□□□□□ -0.81
SSBP3-205ENST00000417664 SERP2Q8N6R1 65 aa9.98□□□□□ -0.81
SSBP3-205ENST00000417664 Q8N9L7 120 aa9.98□□□□□ -0.81
SSBP3-205ENST00000417664 LINC00472Q9H8W2 130 aa9.98□□□□□ -0.81
SSBP3-205ENST00000417664 COX7CP15954 63 aa9.97□□□□□ -0.81
SSBP3-205ENST00000417664 CD164Q04900 197 aa9.97□□□□□ -0.81
SSBP3-205ENST00000417664 LRP1BQ9NZR2 4599 aa9.97□□□□□ -0.81
SSBP3-205ENST00000417664 J3KT08 172 aa9.96□□□□□ -0.81
SSBP3-205ENST00000417664 PKHD1P08F94 4074 aa9.95□□□□□ -0.82
SSBP3-205ENST00000417664 RYR2Q92736 4967 aa9.94□□□□□ -0.82
SSBP3-205ENST00000417664 CCDC179H3BU77 68 aa9.93□□□□□ -0.82
SSBP3-205ENST00000417664 K7EQZ3 153 aa9.93□□□□□ -0.82
SSBP3-205ENST00000417664 SPINK6Q6UWN8 80 aa9.93□□□□□ -0.82
SSBP3-205ENST00000417664 TRAV7A0A075B6U4 112 aa9.91□□□□□ -0.82
SSBP3-205ENST00000417664 A8MWP4 228 aa9.9□□□□□ -0.82
SSBP3-205ENST00000417664 DEFB116Q30KQ4 102 aa9.9□□□□□ -0.82
SSBP3-205ENST00000417664 KRTAP1-4P0C5Y4 121 aa9.9□□□□□ -0.83
SSBP3-205ENST00000417664 HRCT1Q6UXD1 115 aa9.9□□□□□ -0.83
SSBP3-205ENST00000417664 KMT2CQ8NEZ4 4911 aaKnown RBP9.88□□□□□ -0.83
SSBP3-205ENST00000417664 VPS13BQ7Z7G8 4022 aa9.88□□□□□ -0.83
SSBP3-205ENST00000417664 A0A087X002 238 aa9.87□□□□□ -0.83
SSBP3-205ENST00000417664 PRR15Q8IV56 129 aa9.87□□□□□ -0.83
SSBP3-205ENST00000417664 HCG22E2RYF7 251 aa9.87□□□□□ -0.83
SSBP3-205ENST00000417664 NDUFB1O75438 58 aa9.87□□□□□ -0.83
SSBP3-205ENST00000417664 Q96NJ1 140 aa9.87□□□□□ -0.83
SSBP3-205ENST00000417664 KRTAP13-2Q52LG2 175 aa9.86□□□□□ -0.83
SSBP3-205ENST00000417664 DYNC1H1Q14204 4646 aaKnown RBP9.85□□□□□ -0.83
SSBP3-205ENST00000417664 PLA2G1BP04054 148 aaKnown RBP9.84□□□□□ -0.83
SSBP3-205ENST00000417664 ASB16-AS1Q495Z4 193 aa9.84□□□□□ -0.83
SSBP3-205ENST00000417664 SMR3BP02814 79 aaPredicted RBP9.83□□□□□ -0.84
SSBP3-205ENST00000417664 Q5XG85 94 aa9.82□□□□□ -0.84
SSBP3-205ENST00000417664 OCR1Q9BZK8 76 aa9.81□□□□□ -0.84
SSBP3-205ENST00000417664 CDK2AP2O75956 126 aa9.78□□□□□ -0.84
SSBP3-205ENST00000417664 KRTAP10-4P60372 401 aaPredicted RBP9.78□□□□□ -0.84
SSBP3-205ENST00000417664 TYMSOSQ8TAI1 123 aa9.77□□□□□ -0.84
SSBP3-205ENST00000417664 KRTAP29-1A8MX34 341 aaPredicted RBP9.77□□□□□ -0.85
SSBP3-205ENST00000417664 CASC2Q6XLA1 102 aa9.76□□□□□ -0.85
SSBP3-205ENST00000417664 LIMD2Q9BT23 127 aa9.76□□□□□ -0.85
SSBP3-205ENST00000417664 APOBP04114 4563 aaKnown RBP9.76□□□□□ -0.85
SSBP3-205ENST00000417664 A0A1B0GVX0 72 aa9.74□□□□□ -0.85
SSBP3-205ENST00000417664 C4orf48Q5BLP8 95 aa9.74□□□□□ -0.85
SSBP3-205ENST00000417664 WFDC13Q8IUB5 93 aa9.74□□□□□ -0.85
SSBP3-205ENST00000417664 SPINK1P00995 79 aa9.73□□□□□ -0.85
SSBP3-205ENST00000417664 C20orf197Q8N268 126 aa9.73□□□□□ -0.85
SSBP3-205ENST00000417664 MMP24-AS1A0A0U1RRL7 71 aa9.72□□□□□ -0.85
SSBP3-205ENST00000417664 KLKP1Q107X0 134 aa9.72□□□□□ -0.85
SSBP3-205ENST00000417664 FAM229AH3BQW9 127 aa9.71□□□□□ -0.85
SSBP3-205ENST00000417664 SPAG11AQ6PDA7 123 aa9.71□□□□□ -0.86
SSBP3-205ENST00000417664 hDV103S1A0JD37 113 aa9.7□□□□□ -0.86
SSBP3-205ENST00000417664 RPS29P62273 56 aaKnown RBP9.7□□□□□ -0.86
SSBP3-205ENST00000417664 C8orf17Q9NRJ1 99 aa9.7□□□□□ -0.86
SSBP3-205ENST00000417664 TMEM254Q8TBM7 123 aa9.68□□□□□ -0.86
SSBP3-205ENST00000417664 IGHV6-1A0A0B4J1U7 121 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms