RNA–Protein interactions for RNA: ENST00000417503.1

SSXP9-201, Transcript of SSX family pseudogene 9, humanhuman

BASIC

Gene SSXP9, Length 292 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP9-201ENST00000417503 ANKRD17O75179 2603 aaKnown RBP1.43□□□□□ -2.18
SSXP9-201ENST00000417503 FLG2Q5D862 2391 aaPredicted RBP1.43□□□□□ -2.18
SSXP9-201ENST00000417503 DEFB133Q30KQ1 61 aa1.42□□□□□ -2.18
SSXP9-201ENST00000417503 KRTAP5-5Q701N2 237 aaPredicted RBP1.42□□□□□ -2.18
SSXP9-201ENST00000417503 M0QZ58 72 aa1.41□□□□□ -2.18
SSXP9-201ENST00000417503 DEFB1P60022 68 aa1.41□□□□□ -2.18
SSXP9-201ENST00000417503 S4R3F8 94 aa1.41□□□□□ -2.18
SSXP9-201ENST00000417503 CNOT1A5YKK6 2376 aaKnown RBP1.41□□□□□ -2.18
SSXP9-201ENST00000417503 TPRP12270 2363 aaKnown RBP1.41□□□□□ -2.18
SSXP9-201ENST00000417503 KRTAP5-1Q6L8H4 278 aa1.4□□□□□ -2.19
SSXP9-201ENST00000417503 PLCE1Q9P212 2302 aa1.4□□□□□ -2.19
SSXP9-201ENST00000417503 SPART-AS1P0CW21 52 aa1.39□□□□□ -2.19
SSXP9-201ENST00000417503 LCE1CQ5T751 118 aa1.38□□□□□ -2.19
SSXP9-201ENST00000417503 LCE1BQ5T7P3 118 aa1.38□□□□□ -2.19
SSXP9-201ENST00000417503 TRIOBPQ9H2D6 2365 aa1.38□□□□□ -2.19
SSXP9-201ENST00000417503 LINC01556Q5JQF7 62 aa1.37□□□□□ -2.19
SSXP9-201ENST00000417503 DEFB124Q8NES8 71 aa1.37□□□□□ -2.19
SSXP9-201ENST00000417503 C10orf95Q9H7T3 257 aa1.37□□□□□ -2.19
SSXP9-201ENST00000417503 DEFB136Q30KP8 78 aa1.36□□□□□ -2.19
SSXP9-201ENST00000417503 SPINK6Q6UWN8 80 aa1.36□□□□□ -2.19
SSXP9-201ENST00000417503 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.35□□□□□ -2.19
SSXP9-201ENST00000417503 A0A0D9SG42 100 aa1.35□□□□□ -2.19
SSXP9-201ENST00000417503 KRTAP12-4P60329 112 aa1.35□□□□□ -2.19
SSXP9-201ENST00000417503 FBN1P35555 2871 aaKnown RBP1.35□□□□□ -2.19
SSXP9-201ENST00000417503 A0A096LNI7 61 aa1.34□□□□□ -2.19
SSXP9-201ENST00000417503 JMJD1CQ15652 2540 aa1.34□□□□□ -2.2
SSXP9-201ENST00000417503 WNK1Q9H4A3 2382 aa1.34□□□□□ -2.2
SSXP9-201ENST00000417503 A0A096LPF7 62 aa1.33□□□□□ -2.2
SSXP9-201ENST00000417503 FAM208BQ5VWN6 2430 aa1.32□□□□□ -2.2
SSXP9-201ENST00000417503 OBSCNQ5VST9 7968 aa1.32□□□□□ -2.2
SSXP9-201ENST00000417503 COL6A6A6NMZ7 2263 aa1.31□□□□□ -2.2
SSXP9-201ENST00000417503 AKAP6Q13023 2319 aa1.31□□□□□ -2.2
SSXP9-201ENST00000417503 SPTBN1Q01082 2364 aaKnown RBP1.3□□□□□ -2.2
SSXP9-201ENST00000417503 RPS29P62273 56 aaKnown RBP1.3□□□□□ -2.2
SSXP9-201ENST00000417503 HTN3P15516 51 aa1.29□□□□□ -2.2
SSXP9-201ENST00000417503 KRTAP5-4Q6L8H1 288 aa1.29□□□□□ -2.2
SSXP9-201ENST00000417503 PKDREJQ9NTG1 2253 aa1.29□□□□□ -2.2
SSXP9-201ENST00000417503 RP1L1Q8IWN7 2480 aaPredicted RBP1.29□□□□□ -2.2
SSXP9-201ENST00000417503 CACNA1HO95180 2353 aa1.28□□□□□ -2.2
SSXP9-201ENST00000417503 TNP1P09430 55 aa1.28□□□□□ -2.2
SSXP9-201ENST00000417503 OTOGLQ3ZCN5 2332 aa1.27□□□□□ -2.21
SSXP9-201ENST00000417503 C9orf92A6NGG3 77 aa1.27□□□□□ -2.21
SSXP9-201ENST00000417503 KRTAP4-4Q9BYR3 166 aa1.27□□□□□ -2.21
SSXP9-201ENST00000417503 PCNX1Q96RV3 2341 aa1.26□□□□□ -2.21
SSXP9-201ENST00000417503 MAP1BP46821 2468 aaKnown RBP1.26□□□□□ -2.21
SSXP9-201ENST00000417503 ASH1LQ9NR48 2969 aaKnown RBP1.26□□□□□ -2.21
SSXP9-201ENST00000417503 DEFB135Q30KP9 77 aa1.25□□□□□ -2.21
SSXP9-201ENST00000417503 KRTAP4-3Q9BYR4 195 aa1.25□□□□□ -2.21
SSXP9-201ENST00000417503 ROS1P08922 2347 aa1.24□□□□□ -2.21
SSXP9-201ENST00000417503 ACACAQ13085 2346 aa1.24□□□□□ -2.21
SSXP9-201ENST00000417503 SPTA1P02549 2419 aa1.24□□□□□ -2.21
SSXP9-201ENST00000417503 U3KQA8 63 aa1.24□□□□□ -2.21
SSXP9-201ENST00000417503 PTPRZ1P23471 2315 aaPredicted RBP1.24□□□□□ -2.21
SSXP9-201ENST00000417503 PIEZO2Q9H5I5 2752 aa1.21□□□□□ -2.22
SSXP9-201ENST00000417503 MUC6Q6W4X9 2439 aa1.21□□□□□ -2.22
SSXP9-201ENST00000417503 ZNF462Q96JM2 2506 aa1.2□□□□□ -2.22
SSXP9-201ENST00000417503 IGF2RP11717 2491 aa1.2□□□□□ -2.22
SSXP9-201ENST00000417503 WDR87Q6ZQQ6 2873 aa1.2□□□□□ -2.22
SSXP9-201ENST00000417503 SPTBN2O15020 2390 aa1.2□□□□□ -2.22
SSXP9-201ENST00000417503 CSPG4Q6UVK1 2322 aa1.19□□□□□ -2.22
SSXP9-201ENST00000417503 NCOR1O75376 2440 aa1.19□□□□□ -2.22
SSXP9-201ENST00000417503 C2CD3Q4AC94 2353 aa1.18□□□□□ -2.22
SSXP9-201ENST00000417503 CEP250Q9BV73 2442 aa1.18□□□□□ -2.22
SSXP9-201ENST00000417503 KRTAP5-9P26371 169 aa1.17□□□□□ -2.22
SSXP9-201ENST00000417503 ALMS1Q8TCU4 4167 aa1.17□□□□□ -2.22
SSXP9-201ENST00000417503 A0A0C4DFX4 3053 aa1.17□□□□□ -2.22
SSXP9-201ENST00000417503 APC2O95996 2303 aa1.16□□□□□ -2.22
SSXP9-201ENST00000417503 ABCA2Q9BZC7 2435 aa1.16□□□□□ -2.22
SSXP9-201ENST00000417503 M0R2T5 61 aa1.15□□□□□ -2.23
SSXP9-201ENST00000417503 DEFB4AO15263 64 aa1.15□□□□□ -2.23
SSXP9-201ENST00000417503 F8P00451 2351 aa1.14□□□□□ -2.23
SSXP9-201ENST00000417503 SPTBN4Q9H254 2564 aa1.13□□□□□ -2.23
SSXP9-201ENST00000417503 ANKHD1Q8IWZ3 2542 aaKnown RBP1.13□□□□□ -2.23
SSXP9-201ENST00000417503 NBASA2RRP1 2371 aa1.13□□□□□ -2.23
SSXP9-201ENST00000417503 KRTAP5-7Q6L8G8 165 aa1.12□□□□□ -2.23
SSXP9-201ENST00000417503 FAM186AA6NE01 2351 aa1.12□□□□□ -2.23
SSXP9-201ENST00000417503 HELZ2Q9BYK8 2649 aaKnown RBP1.11□□□□□ -2.23
SSXP9-201ENST00000417503 GVINP1Q7Z2Y8 2422 aa1.1□□□□□ -2.23
SSXP9-201ENST00000417503 PKD1L2Q7Z442 2459 aa1.1□□□□□ -2.23
SSXP9-201ENST00000417503 ZNF292O60281 2723 aa1.09□□□□□ -2.23
SSXP9-201ENST00000417503 EP300Q09472 2414 aaPredicted RBP1.09□□□□□ -2.23
SSXP9-201ENST00000417503 CREBBPQ92793 2442 aa1.09□□□□□ -2.23
SSXP9-201ENST00000417503 KRTAP10-4P60372 401 aaPredicted RBP1.09□□□□□ -2.23
SSXP9-201ENST00000417503 COL6A5A8TX70 2615 aa1.09□□□□□ -2.24
SSXP9-201ENST00000417503 TENM2Q9NT68 2774 aa1.08□□□□□ -2.24
SSXP9-201ENST00000417503 MGAQ8IWI9 3026 aa1.08□□□□□ -2.24
SSXP9-201ENST00000417503 HIVEP3Q5T1R4 2406 aa1.08□□□□□ -2.24
SSXP9-201ENST00000417503 CEP290O15078 2479 aa1.08□□□□□ -2.24
SSXP9-201ENST00000417503 NAV2Q8IVL1 2488 aa1.08□□□□□ -2.24
SSXP9-201ENST00000417503 CCDC168Q8NDH2 2452 aa1.08□□□□□ -2.24
SSXP9-201ENST00000417503 MEGF8Q7Z7M0 2845 aa1.07□□□□□ -2.24
SSXP9-201ENST00000417503 NCOR2Q9Y618 2525 aa1.06□□□□□ -2.24
SSXP9-201ENST00000417503 POLQO75417 2590 aa1.06□□□□□ -2.24
SSXP9-201ENST00000417503 UBR5O95071 2799 aaPredicted RBP1.06□□□□□ -2.24
SSXP9-201ENST00000417503 DSPP15924 2871 aaKnown RBP1.06□□□□□ -2.24
SSXP9-201ENST00000417503 SPG11Q96JI7 2443 aa1.05□□□□□ -2.24
SSXP9-201ENST00000417503 TTC28Q96AY4 2481 aa1.05□□□□□ -2.24
SSXP9-201ENST00000417503 CHD7Q9P2D1 2997 aa1.05□□□□□ -2.24
SSXP9-201ENST00000417503 CHD9Q3L8U1 2897 aa1.04□□□□□ -2.24
SSXP9-201ENST00000417503 CEP350Q5VT06 3117 aa1.04□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms