RNA–Protein interactions for RNA: ENST00000415164.5

UBXN4-202, Transcript of UBX domain protein 4, humanhuman

TSL 4

Gene UBXN4, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-202ENST00000415164 Q6ZVH6 145 aa10.07□□□□□ -0.8
UBXN4-202ENST00000415164 ATOH7Q8N100 152 aa10.07□□□□□ -0.8
UBXN4-202ENST00000415164 C20orf202A1L168 122 aa10.06□□□□□ -0.8
UBXN4-202ENST00000415164 VAMP3Q15836 100 aa10.05□□□□□ -0.8
UBXN4-202ENST00000415164 TRBV7-7A0A0K0K1E9 115 aa10.04□□□□□ -0.8
UBXN4-202ENST00000415164 Q6ZQY7 126 aa10.04□□□□□ -0.8
UBXN4-202ENST00000415164 CLEC2BQ92478 149 aa10.04□□□□□ -0.8
UBXN4-202ENST00000415164 Q6JHZ5 121 aa10.03□□□□□ -0.8
UBXN4-202ENST00000415164 IGFL1Q6UW32 110 aa10.02□□□□□ -0.81
UBXN4-202ENST00000415164 Q75L30 129 aa10.02□□□□□ -0.81
UBXN4-202ENST00000415164 hADV29S1A0JD25 119 aa10.01□□□□□ -0.81
UBXN4-202ENST00000415164 LINC00575Q6W349 94 aa10.01□□□□□ -0.81
UBXN4-202ENST00000415164 Q96NJ1 140 aa9.99□□□□□ -0.81
UBXN4-202ENST00000415164 USH2AO75445 5202 aa9.98□□□□□ -0.81
UBXN4-202ENST00000415164 OCIAD2Q56VL3 154 aa9.97□□□□□ -0.81
UBXN4-202ENST00000415164 KRTAP9-7A8MTY7 169 aa9.96□□□□□ -0.82
UBXN4-202ENST00000415164 LST1O00453 97 aa9.96□□□□□ -0.82
UBXN4-202ENST00000415164 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.95□□□□□ -0.82
UBXN4-202ENST00000415164 SSPOA2VEC9 5147 aa9.94□□□□□ -0.82
UBXN4-202ENST00000415164 H3BUT2 72 aa9.93□□□□□ -0.82
UBXN4-202ENST00000415164 CFC1P0CG37 223 aa9.93□□□□□ -0.82
UBXN4-202ENST00000415164 SNHG12Q9BXW3 62 aa9.93□□□□□ -0.82
UBXN4-202ENST00000415164 TRBV20-1A0A075B6N2 111 aa9.91□□□□□ -0.82
UBXN4-202ENST00000415164 COA6Q5JTJ3 125 aaKnown RBP9.89□□□□□ -0.83
UBXN4-202ENST00000415164 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.89□□□□□ -0.83
UBXN4-202ENST00000415164 C12orf57Q99622 126 aa9.89□□□□□ -0.83
UBXN4-202ENST00000415164 KRTAP9-8Q9BYQ0 159 aa9.87□□□□□ -0.83
UBXN4-202ENST00000415164 SS18L2Q9UHA2 77 aa9.86□□□□□ -0.83
UBXN4-202ENST00000415164 SCGB1D1O95968 90 aa9.84□□□□□ -0.83
UBXN4-202ENST00000415164 SNRPEP62304 92 aaKnown RBP9.84□□□□□ -0.83
UBXN4-202ENST00000415164 BVES-AS1Q5T3Y7 98 aa9.84□□□□□ -0.83
UBXN4-202ENST00000415164 C20orf166-AS1Q96NR2 134 aa9.84□□□□□ -0.83
UBXN4-202ENST00000415164 FAM236DA0A1B0GTK5 79 aa9.83□□□□□ -0.84
UBXN4-202ENST00000415164 FAM236CP0DP71 79 aa9.83□□□□□ -0.84
UBXN4-202ENST00000415164 PPDPFLQ8WWR9 84 aa9.83□□□□□ -0.84
UBXN4-202ENST00000415164 HSBP1L1C9JCN9 74 aa9.82□□□□□ -0.84
UBXN4-202ENST00000415164 A8MUU9 505 aa9.81□□□□□ -0.84
UBXN4-202ENST00000415164 DSCR10P59022 87 aa9.8□□□□□ -0.84
UBXN4-202ENST00000415164 A0A087WSZ3 146 aa9.78□□□□□ -0.84
UBXN4-202ENST00000415164 HIST1H4GQ99525 98 aa9.78□□□□□ -0.84
UBXN4-202ENST00000415164 TEN1Q86WV5 123 aa9.76□□□□□ -0.85
UBXN4-202ENST00000415164 SIGMAR1Q99720 223 aa9.76□□□□□ -0.85
UBXN4-202ENST00000415164 FCGBPQ9Y6R7 5405 aaPredicted RBP9.75□□□□□ -0.85
UBXN4-202ENST00000415164 MT2AP02795 61 aa9.74□□□□□ -0.85
UBXN4-202ENST00000415164 SNCGO76070 127 aa9.73□□□□□ -0.85
UBXN4-202ENST00000415164 NDUFV3P56181 108 aaKnown RBP9.73□□□□□ -0.85
UBXN4-202ENST00000415164 S100A2P29034 98 aa9.72□□□□□ -0.85
UBXN4-202ENST00000415164 RAB37Q96AX2 223 aa9.69□□□□□ -0.86
UBXN4-202ENST00000415164 H3BMG7 143 aa9.68□□□□□ -0.86
UBXN4-202ENST00000415164 KRTAP19-1Q8IUB9 90 aa9.68□□□□□ -0.86
UBXN4-202ENST00000415164 MT1FP04733 61 aa9.67□□□□□ -0.86
UBXN4-202ENST00000415164 FABP2P12104 132 aa9.67□□□□□ -0.86
UBXN4-202ENST00000415164 KRTAP10-10P60014 251 aa9.67□□□□□ -0.86
UBXN4-202ENST00000415164 HIST3H2BBQ8N257 126 aa9.67□□□□□ -0.86
UBXN4-202ENST00000415164 HIST1H2BLQ99880 126 aa9.67□□□□□ -0.86
UBXN4-202ENST00000415164 RBM12B-AS1Q9P1G2 102 aa9.67□□□□□ -0.86
UBXN4-202ENST00000415164 KRTAP16-1A8MUX0 517 aa9.66□□□□□ -0.86
UBXN4-202ENST00000415164 LINC00313P59037 77 aa9.66□□□□□ -0.86
UBXN4-202ENST00000415164 FAM218AQ96MZ4 157 aa9.66□□□□□ -0.86
UBXN4-202ENST00000415164 H0YGX0 51 aa9.64□□□□□ -0.87
UBXN4-202ENST00000415164 LCE2BO14633 110 aa9.64□□□□□ -0.87
UBXN4-202ENST00000415164 IGKV4-1P06312 121 aa9.64□□□□□ -0.87
UBXN4-202ENST00000415164 A0A1B0GV72 72 aa9.62□□□□□ -0.87
UBXN4-202ENST00000415164 A0A1W2PNM2 257 aa9.6□□□□□ -0.87
UBXN4-202ENST00000415164 COX8AP10176 69 aa9.59□□□□□ -0.87
UBXN4-202ENST00000415164 HRES1P13985 223 aa9.59□□□□□ -0.87
UBXN4-202ENST00000415164 KRTAP3-3Q9BYR6 98 aa9.59□□□□□ -0.87
UBXN4-202ENST00000415164 KRTAP3-2Q9BYR7 98 aa9.59□□□□□ -0.87
UBXN4-202ENST00000415164 GHRHP01286 108 aa9.58□□□□□ -0.88
UBXN4-202ENST00000415164 DEFB116Q30KQ4 102 aa9.58□□□□□ -0.88
UBXN4-202ENST00000415164 KRTAP9-3Q9BYQ3 159 aa9.58□□□□□ -0.88
UBXN4-202ENST00000415164 MACF1Q9UPN3 7388 aaKnown RBP9.57□□□□□ -0.88
UBXN4-202ENST00000415164 NOTCH2NLQ7Z3S9 236 aa9.56□□□□□ -0.88
UBXN4-202ENST00000415164 IGHV6-1A0A0B4J1U7 121 aa9.55□□□□□ -0.88
UBXN4-202ENST00000415164 A0A0B4J2C4 111 aa9.55□□□□□ -0.88
UBXN4-202ENST00000415164 S100A6P06703 90 aa9.55□□□□□ -0.88
UBXN4-202ENST00000415164 ANKRD29Q8N6D5 301 aa9.54□□□□□ -0.88
UBXN4-202ENST00000415164 MPLKIPQ8TAP9 179 aa9.54□□□□□ -0.88
UBXN4-202ENST00000415164 C14orf144Q96I85 54 aa9.54□□□□□ -0.88
UBXN4-202ENST00000415164 SYNE2Q8WXH0 6885 aaKnown RBP9.53□□□□□ -0.88
UBXN4-202ENST00000415164 A0A1B0GX51 115 aa9.51□□□□□ -0.89
UBXN4-202ENST00000415164 DLEU1O43261 78 aa9.5□□□□□ -0.89
UBXN4-202ENST00000415164 TRBV7-4A0A0J9YYF1 115 aa9.49□□□□□ -0.89
UBXN4-202ENST00000415164 MTURNQ8N3F0 131 aa9.49□□□□□ -0.89
UBXN4-202ENST00000415164 DNAL4O96015 105 aa9.48□□□□□ -0.89
UBXN4-202ENST00000415164 PRO1854Q9UHT4 67 aa9.48□□□□□ -0.89
UBXN4-202ENST00000415164 PAM16Q9Y3D7 125 aa9.47□□□□□ -0.89
UBXN4-202ENST00000415164 TRIAP1O43715 76 aa9.46□□□□□ -0.9
UBXN4-202ENST00000415164 TRACP01848 142 aa9.46□□□□□ -0.9
UBXN4-202ENST00000415164 LINC00846Q9NV44 126 aa9.46□□□□□ -0.9
UBXN4-202ENST00000415164 HIGD1BQ9P298 99 aa9.46□□□□□ -0.9
UBXN4-202ENST00000415164 ORMDL1Q9P0S3 153 aa9.45□□□□□ -0.9
UBXN4-202ENST00000415164 CCKP06307 115 aa9.44□□□□□ -0.9
UBXN4-202ENST00000415164 SPATA45Q537H7 98 aa9.44□□□□□ -0.9
UBXN4-202ENST00000415164 CEND1Q8N111 149 aa9.44□□□□□ -0.9
UBXN4-202ENST00000415164 LINC00472Q9H8W2 130 aa9.44□□□□□ -0.9
UBXN4-202ENST00000415164 TMEM238LA0A1B0GVL6 79 aa9.43□□□□□ -0.9
UBXN4-202ENST00000415164 A6NJY4 79 aa9.43□□□□□ -0.9
UBXN4-202ENST00000415164 VPS25Q9BRG1 176 aa9.43□□□□□ -0.9
UBXN4-202ENST00000415164 C2orf91Q6ZV80 131 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms