RNA–Protein interactions for RNA: ENST00000413364.6

LITAF-203, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-203ENST00000413364 A6NED7 52 aa8.38□□□□□ -1.07
LITAF-203ENST00000413364 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.38□□□□□ -1.07
LITAF-203ENST00000413364 KRTAP1-5Q9BYS1 174 aa8.38□□□□□ -1.07
LITAF-203ENST00000413364 DNAH9Q9NYC9 4486 aa8.38□□□□□ -1.07
LITAF-203ENST00000413364 UBE2DNLQ8IWF7 75 aa8.37□□□□□ -1.07
LITAF-203ENST00000413364 PRR15LQ9BU68 103 aa8.37□□□□□ -1.07
LITAF-203ENST00000413364 PLA2G2DQ9UNK4 145 aa8.37□□□□□ -1.07
LITAF-203ENST00000413364 SERTAD4-AS1Q5TG53 156 aa8.37□□□□□ -1.07
LITAF-203ENST00000413364 COL7A1Q02388 2944 aa8.36□□□□□ -1.07
LITAF-203ENST00000413364 KRTAP21-3Q3LHN1 58 aa8.36□□□□□ -1.07
LITAF-203ENST00000413364 SMIM29Q86T20 159 aa8.36□□□□□ -1.07
LITAF-203ENST00000413364 ETDCA0A1B0GVM5 59 aa8.36□□□□□ -1.07
LITAF-203ENST00000413364 DNAH1Q9P2D7 4330 aa8.35□□□□□ -1.07
LITAF-203ENST00000413364 LOC101927531A0A1B0GV80 90 aa8.35□□□□□ -1.07
LITAF-203ENST00000413364 C7orf33Q8WU49 177 aa8.34□□□□□ -1.07
LITAF-203ENST00000413364 IGLV5-37A0A075B6J1 123 aa8.34□□□□□ -1.07
LITAF-203ENST00000413364 Q9BRP9 147 aa8.34□□□□□ -1.07
LITAF-203ENST00000413364 KCNQ1DNQ9H478 68 aa8.34□□□□□ -1.07
LITAF-203ENST00000413364 LINC00528Q8N1L1 170 aa8.33□□□□□ -1.08
LITAF-203ENST00000413364 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.33□□□□□ -1.08
LITAF-203ENST00000413364 NUPR2A6NF83 97 aa8.33□□□□□ -1.08
LITAF-203ENST00000413364 PRR26Q8N8Z3 221 aa8.32□□□□□ -1.08
LITAF-203ENST00000413364 DNHD1Q96M86 4753 aa8.32□□□□□ -1.08
LITAF-203ENST00000413364 LINC00208Q96KT6 92 aa8.32□□□□□ -1.08
LITAF-203ENST00000413364 A0A1B0GW54 56 aa8.31□□□□□ -1.08
LITAF-203ENST00000413364 SPANXA2-OT1Q8N9U9 137 aa8.31□□□□□ -1.08
LITAF-203ENST00000413364 FAM168BA1KXE4 195 aa8.31□□□□□ -1.08
LITAF-203ENST00000413364 PRR4Q16378 134 aa8.29□□□□□ -1.08
LITAF-203ENST00000413364 KRTAP7-1Q8IUC3 87 aa8.29□□□□□ -1.08
LITAF-203ENST00000413364 DYNC2H1Q8NCM8 4307 aaKnown RBP8.29□□□□□ -1.08
LITAF-203ENST00000413364 CNBPP62633 177 aaKnown RBP8.29□□□□□ -1.08
LITAF-203ENST00000413364 IGLV1-50A0A075B6I6 118 aa8.28□□□□□ -1.08
LITAF-203ENST00000413364 MOBPQ13875 183 aa8.28□□□□□ -1.08
LITAF-203ENST00000413364 LINC01554Q52M75 96 aa8.27□□□□□ -1.09
LITAF-203ENST00000413364 RPL37AP8A6NKH3 93 aa8.27□□□□□ -1.09
LITAF-203ENST00000413364 C14orf177Q52M58 125 aa8.27□□□□□ -1.09
LITAF-203ENST00000413364 NBDYA0A0U1RRE5 68 aa8.26□□□□□ -1.09
LITAF-203ENST00000413364 KRTAP4-16G5E9R7 235 aaPredicted RBP8.25□□□□□ -1.09
LITAF-203ENST00000413364 SPRR1AP35321 89 aa8.25□□□□□ -1.09
LITAF-203ENST00000413364 MP68P56378 58 aa8.25□□□□□ -1.09
LITAF-203ENST00000413364 A0A096LNI7 61 aa8.23□□□□□ -1.09
LITAF-203ENST00000413364 Q6ZRX8 168 aa8.23□□□□□ -1.09
LITAF-203ENST00000413364 DHRS4-AS1Q9P1J3 65 aa8.23□□□□□ -1.09
LITAF-203ENST00000413364 H3BPC8 53 aa8.2□□□□□ -1.1
LITAF-203ENST00000413364 ST20-AS1Q8NBB2 130 aa8.2□□□□□ -1.1
LITAF-203ENST00000413364 IGKV2-24A0A0C4DH68 120 aa8.2□□□□□ -1.1
LITAF-203ENST00000413364 C3orf84H3BNL1 204 aa8.2□□□□□ -1.1
LITAF-203ENST00000413364 Q6ZRN7 208 aaPredicted RBP8.2□□□□□ -1.1
LITAF-203ENST00000413364 LINC00313P59037 77 aa8.19□□□□□ -1.1
LITAF-203ENST00000413364 ASB16-AS1Q495Z4 193 aa8.19□□□□□ -1.1
LITAF-203ENST00000413364 CASC2Q6XLA1 102 aa8.19□□□□□ -1.1
LITAF-203ENST00000413364 A0A1W2PNN7 141 aa8.18□□□□□ -1.1
LITAF-203ENST00000413364 REG3GQ6UW15 175 aa8.18□□□□□ -1.1
LITAF-203ENST00000413364 Q8N377 158 aa8.18□□□□□ -1.1
LITAF-203ENST00000413364 CSMD3Q7Z407 3707 aa8.18□□□□□ -1.1
LITAF-203ENST00000413364 DEFB105AQ8NG35 78 aa8.17□□□□□ -1.1
LITAF-203ENST00000413364 LYSTQ99698 3801 aa8.17□□□□□ -1.1
LITAF-203ENST00000413364 TENM2Q9NT68 2774 aa8.17□□□□□ -1.1
LITAF-203ENST00000413364 C9orf163Q8N9P6 203 aa8.17□□□□□ -1.1
LITAF-203ENST00000413364 LINC01558Q9Y6Z2 57 aa8.16□□□□□ -1.1
LITAF-203ENST00000413364 A0A087X002 238 aa8.15□□□□□ -1.1
LITAF-203ENST00000413364 DNAH10Q8IVF4 4471 aa8.15□□□□□ -1.1
LITAF-203ENST00000413364 MEGF8Q7Z7M0 2845 aa8.15□□□□□ -1.1
LITAF-203ENST00000413364 PLECQ15149 4684 aaKnown RBP8.15□□□□□ -1.11
LITAF-203ENST00000413364 PRKDCP78527 4128 aaKnown RBP8.15□□□□□ -1.11
LITAF-203ENST00000413364 IGLV5-48A0A075B6I7 105 aa8.14□□□□□ -1.11
LITAF-203ENST00000413364 PLA2G1BP04054 148 aaKnown RBP8.14□□□□□ -1.11
LITAF-203ENST00000413364 CHTF8P0CG12 524 aa8.14□□□□□ -1.11
LITAF-203ENST00000413364 DNAH7Q8WXX0 4024 aa8.12□□□□□ -1.11
LITAF-203ENST00000413364 PLAC8Q9NZF1 115 aa8.12□□□□□ -1.11
LITAF-203ENST00000413364 COA5Q86WW8 74 aa8.12□□□□□ -1.11
LITAF-203ENST00000413364 VPS13DQ5THJ4 4388 aa8.11□□□□□ -1.11
LITAF-203ENST00000413364 DSCR10P59022 87 aa8.1□□□□□ -1.11
LITAF-203ENST00000413364 LCE2DQ5TA82 110 aaPredicted RBP8.09□□□□□ -1.11
LITAF-203ENST00000413364 Q6ZR54 194 aa8.09□□□□□ -1.11
LITAF-203ENST00000413364 STARD9Q9P2P6 4700 aa8.09□□□□□ -1.11
LITAF-203ENST00000413364 K7EQZ3 153 aa8.09□□□□□ -1.11
LITAF-203ENST00000413364 TNP2Q05952 138 aa8.09□□□□□ -1.11
LITAF-203ENST00000413364 A0A087WTM6 91 aa8.08□□□□□ -1.12
LITAF-203ENST00000413364 PRAC1Q96KF2 57 aa8.08□□□□□ -1.12
LITAF-203ENST00000413364 PRLHP81277 87 aa8.07□□□□□ -1.12
LITAF-203ENST00000413364 KRTAP11-1Q8IUC1 163 aa8.07□□□□□ -1.12
LITAF-203ENST00000413364 PANO1I0J062 215 aa8.06□□□□□ -1.12
LITAF-203ENST00000413364 IGLV7-46A0A075B6I9 117 aa8.05□□□□□ -1.12
LITAF-203ENST00000413364 H0Y9J4 135 aa8.05□□□□□ -1.12
LITAF-203ENST00000413364 H0Y9P7 68 aa8.04□□□□□ -1.12
LITAF-203ENST00000413364 C1orf137Q5JT78 98 aa8.04□□□□□ -1.12
LITAF-203ENST00000413364 SPRR4Q96PI1 79 aa8.04□□□□□ -1.12
LITAF-203ENST00000413364 SPINK7P58062 85 aa8.04□□□□□ -1.12
LITAF-203ENST00000413364 Q8NBF4 154 aa8.04□□□□□ -1.12
LITAF-203ENST00000413364 SPACA4Q8TDM5 124 aa8.04□□□□□ -1.12
LITAF-203ENST00000413364 A0A1W2PNM2 257 aa8.03□□□□□ -1.12
LITAF-203ENST00000413364 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.02□□□□□ -1.13
LITAF-203ENST00000413364 SPAG11AQ6PDA7 123 aa8.01□□□□□ -1.13
LITAF-203ENST00000413364 RTL8CO15255 209 aa8.01□□□□□ -1.13
LITAF-203ENST00000413364 C1orf134Q5TEV5 83 aa8□□□□□ -1.13
LITAF-203ENST00000413364 KRTAP3-3Q9BYR6 98 aa7.99□□□□□ -1.13
LITAF-203ENST00000413364 KRTAP3-2Q9BYR7 98 aa7.99□□□□□ -1.13
LITAF-203ENST00000413364 FBN3Q75N90 2809 aa7.99□□□□□ -1.13
LITAF-203ENST00000413364 LINC00476Q8WZB0 136 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms