RNA–Protein interactions for RNA: ENST00000412104.6

VRK2-202, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene VRK2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-202ENST00000412104 C9orf153Q5TBE3 101 aa15.17■□□□□ 0.02
VRK2-202ENST00000412104 DNAH2Q9P225 4427 aa15.17■□□□□ 0.02
VRK2-202ENST00000412104 IGLV8-61A0A075B6I0 122 aa15.16■□□□□ 0.02
VRK2-202ENST00000412104 IGFL1Q6UW32 110 aa15.16■□□□□ 0.02
VRK2-202ENST00000412104 KRTAP13-1Q8IUC0 172 aa15.16■□□□□ 0.02
VRK2-202ENST00000412104 SPRR1BP22528 89 aa15.15■□□□□ 0.02
VRK2-202ENST00000412104 HECTD4Q9Y4D8 3996 aa15.15■□□□□ 0.02
VRK2-202ENST00000412104 BPY2O14599 106 aa15.14■□□□□ 0.01
VRK2-202ENST00000412104 A0A0G2JQZ4 141 aa15.13■□□□□ 0.01
VRK2-202ENST00000412104 IGLV5-52A0A0A0MRZ9 124 aa15.13■□□□□ 0.01
VRK2-202ENST00000412104 CRYGAP11844 174 aa15.13■□□□□ 0.01
VRK2-202ENST00000412104 WWC2-AS2Q96NR7 200 aa15.12■□□□□ 0.01
VRK2-202ENST00000412104 Q8N9L7 120 aa15.11■□□□□ 0.01
VRK2-202ENST00000412104 IGKV4-1P06312 121 aa15.09■□□□□ 0.01
VRK2-202ENST00000412104 SS18L2Q9UHA2 77 aa15.09■□□□□ 0.01
VRK2-202ENST00000412104 TGP01266 2768 aa15.09■□□□□ 0.01
VRK2-202ENST00000412104 DNAH17Q9UFH2 4485 aa15.09■□□□□ 0.01
VRK2-202ENST00000412104 PLAC8Q9NZF1 115 aa15.08■□□□□ 0
VRK2-202ENST00000412104 DNAH6Q9C0G6 4158 aa15.02■□□□□ -0
VRK2-202ENST00000412104 SRRM2Q9UQ35 2752 aaKnown RBP15.02□□□□□ -0.01
VRK2-202ENST00000412104 PSORS1C2Q9UIG4 136 aa15.02□□□□□ -0.01
VRK2-202ENST00000412104 TRAV7A0A075B6U4 112 aa14.99□□□□□ -0.01
VRK2-202ENST00000412104 SMIM20Q8N5G0 67 aa14.99□□□□□ -0.01
VRK2-202ENST00000412104 CYSTM1Q9H1C7 97 aa14.98□□□□□ -0.01
VRK2-202ENST00000412104 A0A087WSZ3 146 aa14.98□□□□□ -0.01
VRK2-202ENST00000412104 DSCR10P59022 87 aa14.94□□□□□ -0.02
VRK2-202ENST00000412104 ALMS1Q8TCU4 4167 aa14.94□□□□□ -0.02
VRK2-202ENST00000412104 KRTAP10-2P60368 255 aa14.92□□□□□ -0.02
VRK2-202ENST00000412104 LINC00483Q53H64 154 aa14.91□□□□□ -0.02
VRK2-202ENST00000412104 ZNF706Q9Y5V0 76 aaPredicted RBP14.89□□□□□ -0.03
VRK2-202ENST00000412104 K7EQZ3 153 aa14.88□□□□□ -0.03
VRK2-202ENST00000412104 ZNF861PO60384 105 aa14.88□□□□□ -0.03
VRK2-202ENST00000412104 C20orf197Q8N268 126 aa14.88□□□□□ -0.03
VRK2-202ENST00000412104 DNAH8Q96JB1 4490 aa14.88□□□□□ -0.03
VRK2-202ENST00000412104 FRAS1Q86XX4 4008 aa14.87□□□□□ -0.03
VRK2-202ENST00000412104 IGLV9-49A0A0B4J1Y8 123 aa14.86□□□□□ -0.03
VRK2-202ENST00000412104 DEFB116Q30KQ4 102 aa14.85□□□□□ -0.03
VRK2-202ENST00000412104 FAM30AQ9NZY2 134 aa14.84□□□□□ -0.03
VRK2-202ENST00000412104 OCR1Q9BZK8 76 aa14.81□□□□□ -0.04
VRK2-202ENST00000412104 CIRBP-AS1Q8TBR5 109 aa14.8□□□□□ -0.04
VRK2-202ENST00000412104 IGLV7-43P04211 117 aa14.79□□□□□ -0.04
VRK2-202ENST00000412104 DNAH11Q96DT5 4516 aa14.77□□□□□ -0.04
VRK2-202ENST00000412104 DNAH5Q8TE73 4624 aa14.77□□□□□ -0.04
VRK2-202ENST00000412104 TMEM258P61165 79 aa14.77□□□□□ -0.04
VRK2-202ENST00000412104 RPL37AP61513 92 aaKnown RBP14.77□□□□□ -0.04
VRK2-202ENST00000412104 KLKP1Q107X0 134 aa14.76□□□□□ -0.05
VRK2-202ENST00000412104 LINC00472Q9H8W2 130 aa14.75□□□□□ -0.05
VRK2-202ENST00000412104 ANAPC11Q9NYG5 84 aa14.75□□□□□ -0.05
VRK2-202ENST00000412104 HYDINQ4G0P3 5121 aa14.74□□□□□ -0.05
VRK2-202ENST00000412104 HCG22E2RYF7 251 aa14.73□□□□□ -0.05
VRK2-202ENST00000412104 KRTAP10-1P60331 282 aa14.73□□□□□ -0.05
VRK2-202ENST00000412104 MOBPQ13875 183 aa14.73□□□□□ -0.05
VRK2-202ENST00000412104 Q6ZSA8 131 aa14.73□□□□□ -0.05
VRK2-202ENST00000412104 SNURFQ9Y675 71 aa14.73□□□□□ -0.05
VRK2-202ENST00000412104 PKD1P98161 4303 aa14.68□□□□□ -0.06
VRK2-202ENST00000412104 TMEM254Q8TBM7 123 aa14.68□□□□□ -0.06
VRK2-202ENST00000412104 FAT2Q9NYQ8 4349 aa14.67□□□□□ -0.06
VRK2-202ENST00000412104 HRCT1Q6UXD1 115 aa14.67□□□□□ -0.06
VRK2-202ENST00000412104 A8MWP4 228 aa14.66□□□□□ -0.06
VRK2-202ENST00000412104 H7BZZ5 65 aa14.66□□□□□ -0.06
VRK2-202ENST00000412104 PRR15Q8IV56 129 aa14.64□□□□□ -0.07
VRK2-202ENST00000412104 WFDC13Q8IUB5 93 aa14.62□□□□□ -0.07
VRK2-202ENST00000412104 Q96NJ1 140 aa14.62□□□□□ -0.07
VRK2-202ENST00000412104 J3KT08 172 aa14.61□□□□□ -0.07
VRK2-202ENST00000412104 A0A0U1RQV1 116 aa14.59□□□□□ -0.07
VRK2-202ENST00000412104 LCE6AA0A183 80 aa14.57□□□□□ -0.08
VRK2-202ENST00000412104 KRTAP29-1A8MX34 341 aaPredicted RBP14.57□□□□□ -0.08
VRK2-202ENST00000412104 NDUFC1O43677 76 aa14.56□□□□□ -0.08
VRK2-202ENST00000412104 FAM236DA0A1B0GTK5 79 aa14.54□□□□□ -0.08
VRK2-202ENST00000412104 FAM236CP0DP71 79 aa14.54□□□□□ -0.08
VRK2-202ENST00000412104 CASC2Q6XLA1 102 aa14.54□□□□□ -0.08
VRK2-202ENST00000412104 NDUFB1O75438 58 aa14.51□□□□□ -0.09
VRK2-202ENST00000412104 MMP24-AS1A0A0U1RRL7 71 aa14.48□□□□□ -0.09
VRK2-202ENST00000412104 RPS28P62857 69 aaKnown RBP14.48□□□□□ -0.09
VRK2-202ENST00000412104 C5orf47Q569G3 176 aa14.46□□□□□ -0.09
VRK2-202ENST00000412104 SSBP3-AS1Q7Z2R9 100 aa14.45□□□□□ -0.1
VRK2-202ENST00000412104 LRP1BQ9NZR2 4599 aa14.44□□□□□ -0.1
VRK2-202ENST00000412104 SACSQ9NZJ4 4579 aa14.43□□□□□ -0.1
VRK2-202ENST00000412104 CD164Q04900 197 aa14.43□□□□□ -0.1
VRK2-202ENST00000412104 A0A087X002 238 aa14.42□□□□□ -0.1
VRK2-202ENST00000412104 ZCCHC13Q8WW36 166 aaKnown RBP14.4□□□□□ -0.1
VRK2-202ENST00000412104 hDV103S1A0JD37 113 aa14.39□□□□□ -0.11
VRK2-202ENST00000412104 LINC00336Q6ZUF6 198 aa14.39□□□□□ -0.11
VRK2-202ENST00000412104 A0A1B0GVX0 72 aa14.38□□□□□ -0.11
VRK2-202ENST00000412104 KRTAP13-2Q52LG2 175 aa14.38□□□□□ -0.11
VRK2-202ENST00000412104 OXTP01178 125 aa14.37□□□□□ -0.11
VRK2-202ENST00000412104 FAM229BQ4G0N7 80 aa14.37□□□□□ -0.11
VRK2-202ENST00000412104 CDK2AP2O75956 126 aa14.37□□□□□ -0.11
VRK2-202ENST00000412104 C8orf17Q9NRJ1 99 aa14.37□□□□□ -0.11
VRK2-202ENST00000412104 IGHV6-1A0A0B4J1U7 121 aa14.35□□□□□ -0.11
VRK2-202ENST00000412104 ATP5EP56381 51 aaPredicted RBP14.35□□□□□ -0.11
VRK2-202ENST00000412104 ASB16-AS1Q495Z4 193 aa14.35□□□□□ -0.11
VRK2-202ENST00000412104 KRTAP1-4P0C5Y4 121 aa14.33□□□□□ -0.11
VRK2-202ENST00000412104 MP68P56378 58 aa14.33□□□□□ -0.12
VRK2-202ENST00000412104 SPINK6Q6UWN8 80 aa14.31□□□□□ -0.12
VRK2-202ENST00000412104 SERP1Q9Y6X1 66 aa14.31□□□□□ -0.12
VRK2-202ENST00000412104 VPS13BQ7Z7G8 4022 aa14.28□□□□□ -0.12
VRK2-202ENST00000412104 H0Y9P7 68 aa14.28□□□□□ -0.12
VRK2-202ENST00000412104 PKHD1P08F94 4074 aa14.28□□□□□ -0.12
VRK2-202ENST00000412104 A0A1B0GVY2 172 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms