RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 LOC105371267A0A1B0GV96 52 aa-2.9□□□□□ -2.87
RNU2-55P-201ENST00000411146 NDUFA2O43678 99 aa-2.9□□□□□ -2.87
RNU2-55P-201ENST00000411146 UQCRHP07919 91 aa-2.9□□□□□ -2.87
RNU2-55P-201ENST00000411146 RPL38P63173 70 aaKnown RBP-2.9□□□□□ -2.87
RNU2-55P-201ENST00000411146 MT1MQ8N339 61 aa-2.9□□□□□ -2.87
RNU2-55P-201ENST00000411146 TRGV9Q99603 122 aa-2.9□□□□□ -2.87
RNU2-55P-201ENST00000411146 LTN1O94822 1766 aa-2.91□□□□□ -2.88
RNU2-55P-201ENST00000411146 D6R8Y8 96 aa-2.91□□□□□ -2.88
RNU2-55P-201ENST00000411146 MUSTN1Q8IVN3 82 aa-2.91□□□□□ -2.88
RNU2-55P-201ENST00000411146 CDC42BPGQ6DT37 1551 aa-2.91□□□□□ -2.88
RNU2-55P-201ENST00000411146 H3BQ15 152 aa-2.92□□□□□ -2.88
RNU2-55P-201ENST00000411146 LEPROTL1O95214 131 aa-2.92□□□□□ -2.88
RNU2-55P-201ENST00000411146 IAPPP10997 89 aa-2.92□□□□□ -2.88
RNU2-55P-201ENST00000411146 SERP2Q8N6R1 65 aa-2.92□□□□□ -2.88
RNU2-55P-201ENST00000411146 PARP4Q9UKK3 1724 aaKnown RBP-2.93□□□□□ -2.88
RNU2-55P-201ENST00000411146 MT2AP02795 61 aa-2.93□□□□□ -2.88
RNU2-55P-201ENST00000411146 GAFA1Q96PS6 74 aa-2.93□□□□□ -2.88
RNU2-55P-201ENST00000411146 ROCK2O75116 1388 aaKnown RBP-2.93□□□□□ -2.88
RNU2-55P-201ENST00000411146 CEP170BQ9Y4F5 1589 aaPredicted RBP-2.93□□□□□ -2.88
RNU2-55P-201ENST00000411146 TOGARAM1Q9Y4F4 1720 aa-2.93□□□□□ -2.88
RNU2-55P-201ENST00000411146 F8WEM9 126 aa-2.94□□□□□ -2.88
RNU2-55P-201ENST00000411146 IER3IP1Q9Y5U9 82 aa-2.94□□□□□ -2.88
RNU2-55P-201ENST00000411146 BAZ1AQ9NRL2 1556 aaPredicted RBP-2.95□□□□□ -2.88
RNU2-55P-201ENST00000411146 PZPP20742 1482 aa-2.95□□□□□ -2.88
RNU2-55P-201ENST00000411146 ETDBQ3ZM63 59 aa-2.95□□□□□ -2.88
RNU2-55P-201ENST00000411146 PRDM15P57071 1507 aaPredicted RBP-2.96□□□□□ -2.88
RNU2-55P-201ENST00000411146 LYNX1G3V0Z9 82 aa-2.96□□□□□ -2.88
RNU2-55P-201ENST00000411146 TNP1P09430 55 aa-2.96□□□□□ -2.88
RNU2-55P-201ENST00000411146 BOD1L1Q8NFC6 3051 aa-2.96□□□□□ -2.88
RNU2-55P-201ENST00000411146 TEX14Q8IWB6 1497 aa-2.96□□□□□ -2.88
RNU2-55P-201ENST00000411146 IQCF6A8MYZ5 107 aa-2.97□□□□□ -2.88
RNU2-55P-201ENST00000411146 NDUFC1O43677 76 aa-2.97□□□□□ -2.88
RNU2-55P-201ENST00000411146 MPC2O95563 127 aa-2.97□□□□□ -2.88
RNU2-55P-201ENST00000411146 ATP7BP35670 1465 aa-2.97□□□□□ -2.89
RNU2-55P-201ENST00000411146 ABCC10Q5T3U5 1492 aa-2.97□□□□□ -2.89
RNU2-55P-201ENST00000411146 GNGT2O14610 69 aa-2.98□□□□□ -2.89
RNU2-55P-201ENST00000411146 PPP3R1P63098 170 aa-2.98□□□□□ -2.89
RNU2-55P-201ENST00000411146 CLTCQ00610 1675 aaKnown RBP-2.98□□□□□ -2.89
RNU2-55P-201ENST00000411146 ANKRD36BQ8N2N9 1353 aa-2.99□□□□□ -2.89
RNU2-55P-201ENST00000411146 MT1BP07438 61 aa-2.99□□□□□ -2.89
RNU2-55P-201ENST00000411146 WFDC9Q8NEX5 89 aa-2.99□□□□□ -2.89
RNU2-55P-201ENST00000411146 EIF4G3O43432 1585 aaKnown RBP-3□□□□□ -2.89
RNU2-55P-201ENST00000411146 MMP24-AS1A0A0U1RRL7 71 aa-3□□□□□ -2.89
RNU2-55P-201ENST00000411146 IFI6P09912 130 aa-3□□□□□ -2.89
RNU2-55P-201ENST00000411146 HMGN3Q15651 99 aa-3□□□□□ -2.89
RNU2-55P-201ENST00000411146 CCDC58Q4VC31 144 aa-3□□□□□ -2.89
RNU2-55P-201ENST00000411146 LY75O60449 1722 aa-3.01□□□□□ -2.89
RNU2-55P-201ENST00000411146 DDX60LQ5H9U9 1706 aaKnown RBP-3.01□□□□□ -2.89
RNU2-55P-201ENST00000411146 GNG4P50150 75 aa-3.01□□□□□ -2.89
RNU2-55P-201ENST00000411146 ALKAL2Q6UX46 152 aa-3.01□□□□□ -2.89
RNU2-55P-201ENST00000411146 UBR1Q8IWV7 1749 aa-3.02□□□□□ -2.89
RNU2-55P-201ENST00000411146 TRAV21A0A0B4J279 112 aa-3.03□□□□□ -2.89
RNU2-55P-201ENST00000411146 ZNF720Q7Z2F6 126 aa-3.03□□□□□ -2.89
RNU2-55P-201ENST00000411146 FREM2Q5SZK8 3169 aa-3.03□□□□□ -2.89
RNU2-55P-201ENST00000411146 ITSN2Q9NZM3 1697 aa-3.04□□□□□ -2.9
RNU2-55P-201ENST00000411146 LCE6AA0A183 80 aa-3.04□□□□□ -2.9
RNU2-55P-201ENST00000411146 A0A1B0GUT8 65 aa-3.04□□□□□ -2.9
RNU2-55P-201ENST00000411146 PMCHL2Q9BQD1 86 aa-3.04□□□□□ -2.9
RNU2-55P-201ENST00000411146 CRYBG3Q68DQ2 2970 aa-3.05□□□□□ -2.9
RNU2-55P-201ENST00000411146 KRTAP20-1Q3LI63 56 aa-3.05□□□□□ -2.9
RNU2-55P-201ENST00000411146 IGLV5-48A0A075B6I7 105 aa-3.06□□□□□ -2.9
RNU2-55P-201ENST00000411146 S100A1P23297 94 aa-3.06□□□□□ -2.9
RNU2-55P-201ENST00000411146 PRUNE2Q8WUY3 3088 aa-3.06□□□□□ -2.9
RNU2-55P-201ENST00000411146 TSC22D3Q99576 134 aa-3.06□□□□□ -2.9
RNU2-55P-201ENST00000411146 FAM107BQ9H098 131 aa-3.07□□□□□ -2.9
RNU2-55P-201ENST00000411146 ITSN1Q15811 1721 aa-3.07□□□□□ -2.9
RNU2-55P-201ENST00000411146 CORTO00230 105 aa-3.08□□□□□ -2.9
RNU2-55P-201ENST00000411146 MT-ATP8P03928 68 aa-3.08□□□□□ -2.9
RNU2-55P-201ENST00000411146 ATOX1O00244 68 aa-3.09□□□□□ -2.9
RNU2-55P-201ENST00000411146 TMEM203Q969S6 136 aa-3.09□□□□□ -2.9
RNU2-55P-201ENST00000411146 TIMM8BQ9Y5J9 83 aaPredicted RBP-3.09□□□□□ -2.9
RNU2-55P-201ENST00000411146 ACYP1P07311 99 aa-3.1□□□□□ -2.91
RNU2-55P-201ENST00000411146 PLCH1Q4KWH8 1693 aa-3.11□□□□□ -2.91
RNU2-55P-201ENST00000411146 PLIN4Q96Q06 1357 aa-3.11□□□□□ -2.91
RNU2-55P-201ENST00000411146 PLGLAQ15195 96 aa-3.11□□□□□ -2.91
RNU2-55P-201ENST00000411146 ARFGEF2Q9Y6D5 1785 aa-3.11□□□□□ -2.91
RNU2-55P-201ENST00000411146 DIP2BQ9P265 1576 aa-3.12□□□□□ -2.91
RNU2-55P-201ENST00000411146 ZFHX4Q86UP3 3567 aa-3.12□□□□□ -2.91
RNU2-55P-201ENST00000411146 UQCRHLA0A096LP55 91 aa-3.12□□□□□ -2.91
RNU2-55P-201ENST00000411146 FYCO1Q9BQS8 1478 aa-3.12□□□□□ -2.91
RNU2-55P-201ENST00000411146 KIF1AQ12756 1690 aa-3.12□□□□□ -2.91
RNU2-55P-201ENST00000411146 ZC3H13Q5T200 1668 aaKnown RBP-3.13□□□□□ -2.91
RNU2-55P-201ENST00000411146 A0A1B0GV90 55 aa-3.13□□□□□ -2.91
RNU2-55P-201ENST00000411146 COL5A1-AS1Q5SY13 56 aa-3.14□□□□□ -2.91
RNU2-55P-201ENST00000411146 GTF2H5Q6ZYL4 71 aa-3.14□□□□□ -2.91
RNU2-55P-201ENST00000411146 MAST1Q9Y2H9 1570 aa-3.14□□□□□ -2.91
RNU2-55P-201ENST00000411146 CFAP54Q96N23 3096 aa-3.14□□□□□ -2.91
RNU2-55P-201ENST00000411146 ZFYVE16Q7Z3T8 1539 aa-3.14□□□□□ -2.91
RNU2-55P-201ENST00000411146 DLEU1O43261 78 aa-3.15□□□□□ -2.91
RNU2-55P-201ENST00000411146 WT1-ASQ06250 92 aa-3.15□□□□□ -2.91
RNU2-55P-201ENST00000411146 NEXMIFQ5QGS0 1516 aa-3.15□□□□□ -2.91
RNU2-55P-201ENST00000411146 TMEM131LA2VDJ0 1609 aa-3.15□□□□□ -2.91
RNU2-55P-201ENST00000411146 MYO3AQ8NEV4 1616 aa-3.15□□□□□ -2.91
RNU2-55P-201ENST00000411146 CYB5AP00167 134 aa-3.16□□□□□ -2.92
RNU2-55P-201ENST00000411146 FAUP35544 74 aaKnown RBP-3.16□□□□□ -2.92
RNU2-55P-201ENST00000411146 TJP1Q07157 1748 aa-3.16□□□□□ -2.92
RNU2-55P-201ENST00000411146 NCOA2Q15596 1464 aa-3.16□□□□□ -2.92
RNU2-55P-201ENST00000411146 EPRSP07814 1512 aaKnown RBP-3.17□□□□□ -2.92
RNU2-55P-201ENST00000411146 HMGN2P05204 90 aaKnown RBP-3.17□□□□□ -2.92
RNU2-55P-201ENST00000411146 UNC13AQ9UPW8 1703 aa-3.18□□□□□ -2.92
Retrieved 100 of 20,778 RNA–protein pairs in 160 ms