RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 ANK2Q01484 3957 aa8.58□□□□□ -1.04
COL6A2-204ENST00000409416 PRYO14603 147 aa8.58□□□□□ -1.04
COL6A2-204ENST00000409416 NDUFS5O43920 106 aa8.57□□□□□ -1.04
COL6A2-204ENST00000409416 FBN3Q75N90 2809 aa8.57□□□□□ -1.04
COL6A2-204ENST00000409416 A0A1W2PNM2 257 aa8.56□□□□□ -1.04
COL6A2-204ENST00000409416 ATP5EP56381 51 aaPredicted RBP8.55□□□□□ -1.04
COL6A2-204ENST00000409416 IGLV1-50A0A075B6I6 118 aa8.55□□□□□ -1.04
COL6A2-204ENST00000409416 BCE1O60756 84 aa8.53□□□□□ -1.04
COL6A2-204ENST00000409416 CHKB-CPT1BH3BT56 60 aa8.52□□□□□ -1.04
COL6A2-204ENST00000409416 LINC00476Q8WZB0 136 aa8.52□□□□□ -1.05
COL6A2-204ENST00000409416 A8MUN3 132 aa8.51□□□□□ -1.05
COL6A2-204ENST00000409416 CD164Q04900 197 aa8.51□□□□□ -1.05
COL6A2-204ENST00000409416 K7EQZ3 153 aa8.5□□□□□ -1.05
COL6A2-204ENST00000409416 Q8NBF4 154 aa8.5□□□□□ -1.05
COL6A2-204ENST00000409416 EPM2AB3EWF7 344 aa8.5□□□□□ -1.05
COL6A2-204ENST00000409416 KRTAP7-1Q8IUC3 87 aa8.5□□□□□ -1.05
COL6A2-204ENST00000409416 IGLV5-48A0A075B6I7 105 aa8.49□□□□□ -1.05
COL6A2-204ENST00000409416 PANO1I0J062 215 aa8.49□□□□□ -1.05
COL6A2-204ENST00000409416 A8MU10 97 aa8.48□□□□□ -1.05
COL6A2-204ENST00000409416 RETNLBQ9BQ08 111 aa8.48□□□□□ -1.05
COL6A2-204ENST00000409416 OCR1Q9BZK8 76 aa8.48□□□□□ -1.05
COL6A2-204ENST00000409416 KRTAP11-1Q8IUC1 163 aa8.47□□□□□ -1.05
COL6A2-204ENST00000409416 TLX1NBP0CAT3 122 aa8.46□□□□□ -1.06
COL6A2-204ENST00000409416 PRR15Q8IV56 129 aa8.45□□□□□ -1.06
COL6A2-204ENST00000409416 C1orf64Q8NEQ6 169 aa8.45□□□□□ -1.06
COL6A2-204ENST00000409416 KRTAP4-16G5E9R7 235 aaPredicted RBP8.44□□□□□ -1.06
COL6A2-204ENST00000409416 LYSTQ99698 3801 aa8.44□□□□□ -1.06
COL6A2-204ENST00000409416 TRAV22A0A0B4J277 110 aa8.44□□□□□ -1.06
COL6A2-204ENST00000409416 NBDYA0A0U1RRE5 68 aa8.43□□□□□ -1.06
COL6A2-204ENST00000409416 B9D2Q9BPU9 175 aa8.43□□□□□ -1.06
COL6A2-204ENST00000409416 A6NED7 52 aa8.43□□□□□ -1.06
COL6A2-204ENST00000409416 RBM12B-AS1Q9P1G2 102 aa8.43□□□□□ -1.06
COL6A2-204ENST00000409416 DSCR10P59022 87 aa8.42□□□□□ -1.06
COL6A2-204ENST00000409416 IGFL1Q6UW32 110 aa8.42□□□□□ -1.06
COL6A2-204ENST00000409416 C4orf48Q5BLP8 95 aa8.42□□□□□ -1.06
COL6A2-204ENST00000409416 SPRR1AP35321 89 aa8.41□□□□□ -1.06
COL6A2-204ENST00000409416 PLA2G2DQ9UNK4 145 aa8.41□□□□□ -1.06
COL6A2-204ENST00000409416 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.41□□□□□ -1.06
COL6A2-204ENST00000409416 CIRBP-AS1Q8TBR5 109 aa8.41□□□□□ -1.06
COL6A2-204ENST00000409416 LINC00208Q96KT6 92 aa8.41□□□□□ -1.06
COL6A2-204ENST00000409416 PRR15LQ9BU68 103 aa8.41□□□□□ -1.06
COL6A2-204ENST00000409416 APLNQ9ULZ1 77 aa8.4□□□□□ -1.07
COL6A2-204ENST00000409416 C16orf90A8MZG2 172 aa8.39□□□□□ -1.07
COL6A2-204ENST00000409416 HCG22E2RYF7 251 aa8.39□□□□□ -1.07
COL6A2-204ENST00000409416 PCOTHQ58A44 107 aa8.39□□□□□ -1.07
COL6A2-204ENST00000409416 TNP2Q05952 138 aa8.39□□□□□ -1.07
COL6A2-204ENST00000409416 CDK2AP2O75956 126 aa8.39□□□□□ -1.07
COL6A2-204ENST00000409416 IGLV5-37A0A075B6J1 123 aa8.38□□□□□ -1.07
COL6A2-204ENST00000409416 IGHV6-1A0A0B4J1U7 121 aa8.38□□□□□ -1.07
COL6A2-204ENST00000409416 MOBPQ13875 183 aa8.38□□□□□ -1.07
COL6A2-204ENST00000409416 DNAH10Q8IVF4 4471 aa8.38□□□□□ -1.07
COL6A2-204ENST00000409416 IGLV5-52A0A0A0MRZ9 124 aa8.37□□□□□ -1.07
COL6A2-204ENST00000409416 MEGF8Q7Z7M0 2845 aa8.37□□□□□ -1.07
COL6A2-204ENST00000409416 hDV103S1A0JD37 113 aa8.36□□□□□ -1.07
COL6A2-204ENST00000409416 SPRR4Q96PI1 79 aa8.36□□□□□ -1.07
COL6A2-204ENST00000409416 C14orf177Q52M58 125 aa8.35□□□□□ -1.07
COL6A2-204ENST00000409416 RTL8CO15255 209 aa8.33□□□□□ -1.08
COL6A2-204ENST00000409416 NUPR2A6NF83 97 aa8.33□□□□□ -1.08
COL6A2-204ENST00000409416 MP68P56378 58 aa8.33□□□□□ -1.08
COL6A2-204ENST00000409416 KTN1-AS1Q86SY8 53 aa8.32□□□□□ -1.08
COL6A2-204ENST00000409416 FLG2Q5D862 2391 aaPredicted RBP8.31□□□□□ -1.08
COL6A2-204ENST00000409416 A0A1B0GW54 56 aa8.3□□□□□ -1.08
COL6A2-204ENST00000409416 CASC2Q6XLA1 102 aa8.3□□□□□ -1.08
COL6A2-204ENST00000409416 C9orf163Q8N9P6 203 aa8.29□□□□□ -1.08
COL6A2-204ENST00000409416 NDUFB1O75438 58 aa8.28□□□□□ -1.08
COL6A2-204ENST00000409416 C1orf134Q5TEV5 83 aa8.28□□□□□ -1.08
COL6A2-204ENST00000409416 DMBT1Q9UGM3 2413 aaPredicted RBP8.28□□□□□ -1.08
COL6A2-204ENST00000409416 H3BS24 57 aa8.27□□□□□ -1.09
COL6A2-204ENST00000409416 Q1T7F1 81 aa8.27□□□□□ -1.09
COL6A2-204ENST00000409416 A0A087WTM6 91 aa8.26□□□□□ -1.09
COL6A2-204ENST00000409416 PSORS1C2Q9UIG4 136 aa8.26□□□□□ -1.09
COL6A2-204ENST00000409416 H0Y9P7 68 aa8.26□□□□□ -1.09
COL6A2-204ENST00000409416 CNBPP62633 177 aaKnown RBP8.24□□□□□ -1.09
COL6A2-204ENST00000409416 SMR3BP02814 79 aaPredicted RBP8.23□□□□□ -1.09
COL6A2-204ENST00000409416 HUWE1Q7Z6Z7 4374 aaKnown RBP8.23□□□□□ -1.09
COL6A2-204ENST00000409416 Q5VV11 94 aa8.2□□□□□ -1.1
COL6A2-204ENST00000409416 A8MWP4 228 aa8.17□□□□□ -1.1
COL6A2-204ENST00000409416 SPAG11AQ6PDA7 123 aa8.17□□□□□ -1.1
COL6A2-204ENST00000409416 SPACA4Q8TDM5 124 aa8.17□□□□□ -1.1
COL6A2-204ENST00000409416 ZCCHC13Q8WW36 166 aaKnown RBP8.17□□□□□ -1.1
COL6A2-204ENST00000409416 PRAC1Q96KF2 57 aa8.16□□□□□ -1.1
COL6A2-204ENST00000409416 CMYA5Q8N3K9 4069 aa8.16□□□□□ -1.1
COL6A2-204ENST00000409416 KRTAP10-2P60368 255 aa8.15□□□□□ -1.11
COL6A2-204ENST00000409416 LIMD2Q9BT23 127 aa8.15□□□□□ -1.11
COL6A2-204ENST00000409416 IGLV8-61A0A075B6I0 122 aa8.14□□□□□ -1.11
COL6A2-204ENST00000409416 LCE6AA0A183 80 aa8.14□□□□□ -1.11
COL6A2-204ENST00000409416 ATP11AUNQ6ZP68 121 aa8.13□□□□□ -1.11
COL6A2-204ENST00000409416 DNHD1Q96M86 4753 aa8.13□□□□□ -1.11
COL6A2-204ENST00000409416 LINC00472Q9H8W2 130 aa8.13□□□□□ -1.11
COL6A2-204ENST00000409416 LCA10Q71F78 164 aa8.12□□□□□ -1.11
COL6A2-204ENST00000409416 C8orf87E5RJ46 101 aa8.12□□□□□ -1.11
COL6A2-204ENST00000409416 KRTAP29-1A8MX34 341 aaPredicted RBP8.11□□□□□ -1.11
COL6A2-204ENST00000409416 C7orf65Q6ZTY9 151 aa8.1□□□□□ -1.11
COL6A2-204ENST00000409416 PLECQ15149 4684 aaKnown RBP8.1□□□□□ -1.11
COL6A2-204ENST00000409416 A0A087X002 238 aa8.09□□□□□ -1.11
COL6A2-204ENST00000409416 NOTCH2NLQ7Z3S9 236 aa8.09□□□□□ -1.11
COL6A2-204ENST00000409416 Q8N9P0 234 aaPredicted RBP8.09□□□□□ -1.11
COL6A2-204ENST00000409416 DNAH7Q8WXX0 4024 aa8.08□□□□□ -1.12
COL6A2-204ENST00000409416 DNAH9Q9NYC9 4486 aa8.08□□□□□ -1.12
COL6A2-204ENST00000409416 MMP24-AS1A0A0U1RRL7 71 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms