RNA–Protein interactions for RNA: ENST00000406072.5

HDAC9-203, Transcript of histone deacetylase 9, humanhuman

TSL 5 BASIC

Gene HDAC9, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-203ENST00000406072 Q75L30 129 aa3.87□□□□□ -1.79
HDAC9-203ENST00000406072 CSMD2Q7Z408 3487 aa3.86□□□□□ -1.79
HDAC9-203ENST00000406072 A0A1W2PNM2 257 aa3.86□□□□□ -1.79
HDAC9-203ENST00000406072 LINC00313P59037 77 aa3.86□□□□□ -1.79
HDAC9-203ENST00000406072 MIR22HGQ0VDD5 57 aa3.86□□□□□ -1.79
HDAC9-203ENST00000406072 UNC79Q9P2D8 2635 aa3.86□□□□□ -1.79
HDAC9-203ENST00000406072 KRTAP24-1Q3LI83 254 aa3.85□□□□□ -1.79
HDAC9-203ENST00000406072 A8MWP4 228 aa3.85□□□□□ -1.79
HDAC9-203ENST00000406072 ASH1LQ9NR48 2969 aaKnown RBP3.85□□□□□ -1.79
HDAC9-203ENST00000406072 SPINT4Q6UDR6 99 aa3.85□□□□□ -1.79
HDAC9-203ENST00000406072 LINC00612Q8N6U2 182 aa3.85□□□□□ -1.79
HDAC9-203ENST00000406072 CELSR2Q9HCU4 2923 aa3.85□□□□□ -1.79
HDAC9-203ENST00000406072 CSNK1G2-AS1Q8NCQ2 148 aa3.85□□□□□ -1.79
HDAC9-203ENST00000406072 GCN1Q92616 2671 aaKnown RBP3.84□□□□□ -1.79
HDAC9-203ENST00000406072 CELSR1Q9NYQ6 3014 aa3.84□□□□□ -1.79
HDAC9-203ENST00000406072 GVQW2A0A096LPI5 108 aaPredicted RBP3.84□□□□□ -1.79
HDAC9-203ENST00000406072 FASNP49327 2511 aaKnown RBP3.84□□□□□ -1.79
HDAC9-203ENST00000406072 ITPR3Q14573 2671 aa3.84□□□□□ -1.79
HDAC9-203ENST00000406072 COL12A1Q99715 3063 aa3.83□□□□□ -1.8
HDAC9-203ENST00000406072 MGAM2Q2M2H8 2515 aa3.83□□□□□ -1.8
HDAC9-203ENST00000406072 MOBPQ13875 183 aa3.83□□□□□ -1.8
HDAC9-203ENST00000406072 PHF5AQ7RTV0 110 aaKnown RBP3.83□□□□□ -1.8
HDAC9-203ENST00000406072 SSBP3-AS1Q7Z2R9 100 aa3.83□□□□□ -1.8
HDAC9-203ENST00000406072 KCNQ1DNQ9H478 68 aa3.83□□□□□ -1.8
HDAC9-203ENST00000406072 DSCR10P59022 87 aa3.83□□□□□ -1.8
HDAC9-203ENST00000406072 C14orf177Q52M58 125 aa3.83□□□□□ -1.8
HDAC9-203ENST00000406072 CUBNO60494 3623 aa3.82□□□□□ -1.8
HDAC9-203ENST00000406072 IGKV2D-30A0A075B6S6 120 aa3.82□□□□□ -1.8
HDAC9-203ENST00000406072 IGKV2-30P06310 120 aa3.82□□□□□ -1.8
HDAC9-203ENST00000406072 GIG44P09565 113 aaPredicted RBP3.82□□□□□ -1.8
HDAC9-203ENST00000406072 IGFL1Q6UW32 110 aa3.82□□□□□ -1.8
HDAC9-203ENST00000406072 DYNC2H1Q8NCM8 4307 aaKnown RBP3.82□□□□□ -1.8
HDAC9-203ENST00000406072 IGLV5-48A0A075B6I7 105 aa3.81□□□□□ -1.8
HDAC9-203ENST00000406072 A8MU10 97 aa3.81□□□□□ -1.8
HDAC9-203ENST00000406072 NOTCH1P46531 2555 aa3.81□□□□□ -1.8
HDAC9-203ENST00000406072 SPINK7P58062 85 aa3.81□□□□□ -1.8
HDAC9-203ENST00000406072 CIRBP-AS1Q8TBR5 109 aa3.8□□□□□ -1.8
HDAC9-203ENST00000406072 LINC01558Q9Y6Z2 57 aa3.8□□□□□ -1.8
HDAC9-203ENST00000406072 CRYBG3Q68DQ2 2970 aa3.8□□□□□ -1.8
HDAC9-203ENST00000406072 FAM168BA1KXE4 195 aa3.8□□□□□ -1.8
HDAC9-203ENST00000406072 C1orf134Q5TEV5 83 aa3.8□□□□□ -1.8
HDAC9-203ENST00000406072 IGLV7-46A0A075B6I9 117 aa3.79□□□□□ -1.8
HDAC9-203ENST00000406072 Q8NDZ9 215 aa3.79□□□□□ -1.8
HDAC9-203ENST00000406072 NBEAL2Q6ZNJ1 2754 aa3.79□□□□□ -1.8
HDAC9-203ENST00000406072 MAST4O15021 2626 aa3.79□□□□□ -1.8
HDAC9-203ENST00000406072 CSMD1Q96PZ7 3565 aa3.78□□□□□ -1.8
HDAC9-203ENST00000406072 CSAG1Q6PB30 78 aa3.78□□□□□ -1.8
HDAC9-203ENST00000406072 MRPL34Q9BQ48 92 aaKnown RBP3.78□□□□□ -1.8
HDAC9-203ENST00000406072 DMBT1Q9UGM3 2413 aaPredicted RBP3.78□□□□□ -1.8
HDAC9-203ENST00000406072 C9orf163Q8N9P6 203 aa3.78□□□□□ -1.8
HDAC9-203ENST00000406072 HELZ2Q9BYK8 2649 aaKnown RBP3.78□□□□□ -1.8
HDAC9-203ENST00000406072 IGLV1-50A0A075B6I6 118 aa3.77□□□□□ -1.81
HDAC9-203ENST00000406072 HECTD1Q9ULT8 2610 aa3.77□□□□□ -1.81
HDAC9-203ENST00000406072 H3BNG1 76 aa3.77□□□□□ -1.81
HDAC9-203ENST00000406072 C8orf17Q9NRJ1 99 aa3.76□□□□□ -1.81
HDAC9-203ENST00000406072 Q8NAQ8 132 aa3.76□□□□□ -1.81
HDAC9-203ENST00000406072 MXRA5Q9NR99 2828 aa3.76□□□□□ -1.81
HDAC9-203ENST00000406072 A6NN06 94 aa3.76□□□□□ -1.81
HDAC9-203ENST00000406072 SPRR4Q96PI1 79 aa3.76□□□□□ -1.81
HDAC9-203ENST00000406072 PRR34Q9NV39 138 aa3.76□□□□□ -1.81
HDAC9-203ENST00000406072 KRTAP10-11P60412 298 aa3.75□□□□□ -1.81
HDAC9-203ENST00000406072 TACC2O95359 2948 aa3.75□□□□□ -1.81
HDAC9-203ENST00000406072 SEC61BP60468 96 aaKnown RBP3.75□□□□□ -1.81
HDAC9-203ENST00000406072 LINC01556Q5JQF7 62 aa3.75□□□□□ -1.81
HDAC9-203ENST00000406072 TEX15Q9BXT5 2789 aa3.74□□□□□ -1.81
HDAC9-203ENST00000406072 DNAH6Q9C0G6 4158 aa3.74□□□□□ -1.81
HDAC9-203ENST00000406072 FLNBO75369 2602 aaKnown RBP3.74□□□□□ -1.81
HDAC9-203ENST00000406072 COL6A5A8TX70 2615 aa3.74□□□□□ -1.81
HDAC9-203ENST00000406072 FLNAP21333 2647 aaKnown RBP3.73□□□□□ -1.81
HDAC9-203ENST00000406072 NSD1Q96L73 2696 aaPredicted RBP3.73□□□□□ -1.81
HDAC9-203ENST00000406072 C15orf56Q8N910 161 aa3.73□□□□□ -1.81
HDAC9-203ENST00000406072 ZCCHC13Q8WW36 166 aaKnown RBP3.73□□□□□ -1.81
HDAC9-203ENST00000406072 HRES1P13985 223 aa3.72□□□□□ -1.81
HDAC9-203ENST00000406072 FLG2Q5D862 2391 aaPredicted RBP3.72□□□□□ -1.81
HDAC9-203ENST00000406072 A0A1B0GVX0 72 aa3.72□□□□□ -1.81
HDAC9-203ENST00000406072 ITPR2Q14571 2701 aa3.72□□□□□ -1.81
HDAC9-203ENST00000406072 DNAH1Q9P2D7 4330 aa3.71□□□□□ -1.82
HDAC9-203ENST00000406072 CNBPP62633 177 aaKnown RBP3.71□□□□□ -1.82
HDAC9-203ENST00000406072 ADM2Q7Z4H4 148 aa3.71□□□□□ -1.82
HDAC9-203ENST00000406072 BAHCC1Q9P281 2608 aa3.7□□□□□ -1.82
HDAC9-203ENST00000406072 NBEAL1Q6ZS30 2694 aa3.7□□□□□ -1.82
HDAC9-203ENST00000406072 CHTF8P0CG12 524 aa3.7□□□□□ -1.82
HDAC9-203ENST00000406072 LCE2DQ5TA82 110 aaPredicted RBP3.7□□□□□ -1.82
HDAC9-203ENST00000406072 HIVEP1P15822 2718 aa3.7□□□□□ -1.82
HDAC9-203ENST00000406072 ZANQ9Y493 2812 aa3.7□□□□□ -1.82
HDAC9-203ENST00000406072 HUWE1Q7Z6Z7 4374 aaKnown RBP3.69□□□□□ -1.82
HDAC9-203ENST00000406072 RTL8CO15255 209 aa3.69□□□□□ -1.82
HDAC9-203ENST00000406072 DNAH7Q8WXX0 4024 aa3.69□□□□□ -1.82
HDAC9-203ENST00000406072 DNAH9Q9NYC9 4486 aa3.68□□□□□ -1.82
HDAC9-203ENST00000406072 K7EIL1 84 aa3.68□□□□□ -1.82
HDAC9-203ENST00000406072 CRIPTQ9P021 101 aa3.67□□□□□ -1.82
HDAC9-203ENST00000406072 MMP24-AS1A0A0U1RRL7 71 aa3.66□□□□□ -1.82
HDAC9-203ENST00000406072 PLA2G1BP04054 148 aaKnown RBP3.66□□□□□ -1.82
HDAC9-203ENST00000406072 SPACA4Q8TDM5 124 aa3.66□□□□□ -1.82
HDAC9-203ENST00000406072 STAB1Q9NY15 2570 aa3.65□□□□□ -1.82
HDAC9-203ENST00000406072 TLX1NBP0CAT3 122 aa3.65□□□□□ -1.83
HDAC9-203ENST00000406072 LCE6AA0A183 80 aa3.65□□□□□ -1.83
HDAC9-203ENST00000406072 ALMS1Q8TCU4 4167 aa3.65□□□□□ -1.83
HDAC9-203ENST00000406072 ASB16-AS1Q495Z4 193 aa3.63□□□□□ -1.83
HDAC9-203ENST00000406072 DNAH10OSP0CZ25 163 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms