RNA–Protein interactions for RNA: ENST00000400564.5

SAMSN1-202, Transcript of SAM domain, SH3 domain and nuclear localization signals 1, humanhuman

TSL 1 (best) BASIC

Gene SAMSN1, Length 1,382 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMSN1-202ENST00000400564 H3BVH4 76 aa0.23□□□□□ -2.37
SAMSN1-202ENST00000400564 SPRR2DP22532 72 aa0.23□□□□□ -2.37
SAMSN1-202ENST00000400564 FLNAP21333 2647 aaKnown RBP0.23□□□□□ -2.37
SAMSN1-202ENST00000400564 RIF1Q5UIP0 2472 aaKnown RBP0.23□□□□□ -2.37
SAMSN1-202ENST00000400564 EIF2AK4Q9P2K8 1649 aaKnown RBP0.23□□□□□ -2.37
SAMSN1-202ENST00000400564 DEFB135Q30KP9 77 aa0.22□□□□□ -2.37
SAMSN1-202ENST00000400564 PRO3102Q9H379 93 aa0.22□□□□□ -2.37
SAMSN1-202ENST00000400564 STAB2Q8WWQ8 2551 aa0.22□□□□□ -2.37
SAMSN1-202ENST00000400564 EPPK1P58107 5090 aaKnown RBP0.22□□□□□ -2.37
SAMSN1-202ENST00000400564 WIZO95785 1651 aa0.22□□□□□ -2.37
SAMSN1-202ENST00000400564 DNMBPQ6XZF7 1577 aa0.22□□□□□ -2.37
SAMSN1-202ENST00000400564 RYR3Q15413 4870 aa0.22□□□□□ -2.37
SAMSN1-202ENST00000400564 CREBBPQ92793 2442 aa0.21□□□□□ -2.38
SAMSN1-202ENST00000400564 AKAP13Q12802 2813 aa0.21□□□□□ -2.38
SAMSN1-202ENST00000400564 DEFA5Q01523 94 aa0.21□□□□□ -2.38
SAMSN1-202ENST00000400564 DIP2AQ14689 1571 aa0.21□□□□□ -2.38
SAMSN1-202ENST00000400564 DDX60LQ5H9U9 1706 aaKnown RBP0.21□□□□□ -2.38
SAMSN1-202ENST00000400564 C3orf79P0CE67 100 aa0.2□□□□□ -2.38
SAMSN1-202ENST00000400564 HERC1Q15751 4861 aa0.2□□□□□ -2.38
SAMSN1-202ENST00000400564 CDC42BPGQ6DT37 1551 aa0.2□□□□□ -2.38
SAMSN1-202ENST00000400564 DUOX2Q9NRD8 1548 aa0.2□□□□□ -2.38
SAMSN1-202ENST00000400564 PRRC2CQ9Y520 2896 aaKnown RBP0.2□□□□□ -2.38
SAMSN1-202ENST00000400564 FLNCQ14315 2725 aa0.2□□□□□ -2.38
SAMSN1-202ENST00000400564 CICQ96RK0 1608 aaPredicted RBP0.2□□□□□ -2.38
SAMSN1-202ENST00000400564 DOPEY1Q5JWR5 2465 aa0.2□□□□□ -2.38
SAMSN1-202ENST00000400564 LINC00158P58513 81 aa0.19□□□□□ -2.38
SAMSN1-202ENST00000400564 COL6A5A8TX70 2615 aa0.19□□□□□ -2.38
SAMSN1-202ENST00000400564 ACANP16112 2415 aa0.19□□□□□ -2.38
SAMSN1-202ENST00000400564 NBASA2RRP1 2371 aa0.18□□□□□ -2.38
SAMSN1-202ENST00000400564 TENM2Q9NT68 2774 aa0.18□□□□□ -2.38
SAMSN1-202ENST00000400564 HECTD1Q9ULT8 2610 aa0.18□□□□□ -2.38
SAMSN1-202ENST00000400564 LMTK2Q8IWU2 1503 aa0.18□□□□□ -2.38
SAMSN1-202ENST00000400564 ASXL1Q8IXJ9 1541 aa0.18□□□□□ -2.38
SAMSN1-202ENST00000400564 ZC3H13Q5T200 1668 aaKnown RBP0.18□□□□□ -2.38
SAMSN1-202ENST00000400564 SPRR2GQ9BYE4 73 aa0.18□□□□□ -2.38
SAMSN1-202ENST00000400564 TNRC18O15417 2968 aaPredicted RBP0.17□□□□□ -2.38
SAMSN1-202ENST00000400564 USH2AO75445 5202 aa0.17□□□□□ -2.38
SAMSN1-202ENST00000400564 LRP2P98164 4655 aa0.17□□□□□ -2.38
SAMSN1-202ENST00000400564 PDZD2O15018 2839 aa0.17□□□□□ -2.38
SAMSN1-202ENST00000400564 ABCA9Q8IUA7 1624 aa0.17□□□□□ -2.38
SAMSN1-202ENST00000400564 RNF17Q9BXT8 1623 aaKnown RBP0.17□□□□□ -2.38
SAMSN1-202ENST00000400564 H0YAA0 97 aa0.17□□□□□ -2.38
SAMSN1-202ENST00000400564 FLNBO75369 2602 aaKnown RBP0.17□□□□□ -2.38
SAMSN1-202ENST00000400564 NRAPQ86VF7 1730 aa0.16□□□□□ -2.38
SAMSN1-202ENST00000400564 PKD1P98161 4303 aa0.16□□□□□ -2.38
SAMSN1-202ENST00000400564 ADAMTS12P58397 1594 aa0.16□□□□□ -2.38
SAMSN1-202ENST00000400564 NBEAL2Q6ZNJ1 2754 aa0.16□□□□□ -2.38
SAMSN1-202ENST00000400564 KCNQ1DNQ9H478 68 aa0.16□□□□□ -2.38
SAMSN1-202ENST00000400564 HILPDAQ9Y5L2 63 aa0.16□□□□□ -2.38
SAMSN1-202ENST00000400564 SETD2Q9BYW2 2564 aaPredicted RBP0.16□□□□□ -2.38
SAMSN1-202ENST00000400564 VPS13BQ7Z7G8 4022 aa0.15□□□□□ -2.38
SAMSN1-202ENST00000400564 LRP1BQ9NZR2 4599 aa0.15□□□□□ -2.39
SAMSN1-202ENST00000400564 MADDQ8WXG6 1647 aa0.15□□□□□ -2.39
SAMSN1-202ENST00000400564 FASNP49327 2511 aaKnown RBP0.15□□□□□ -2.39
SAMSN1-202ENST00000400564 PLXNC1O60486 1568 aa0.14□□□□□ -2.39
SAMSN1-202ENST00000400564 ANKRD11Q6UB99 2663 aaPredicted RBP0.14□□□□□ -2.39
SAMSN1-202ENST00000400564 ENHOQ6UWT2 76 aa0.14□□□□□ -2.39
SAMSN1-202ENST00000400564 NHSQ6T4R5 1651 aa0.13□□□□□ -2.39
SAMSN1-202ENST00000400564 MAP1AP78559 2803 aaPredicted RBP0.13□□□□□ -2.39
SAMSN1-202ENST00000400564 PCNX1Q96RV3 2341 aa0.13□□□□□ -2.39
SAMSN1-202ENST00000400564 DEFB131BA0A096LNP1 70 aa0.13□□□□□ -2.39
SAMSN1-202ENST00000400564 H0YGG7 62 aa0.13□□□□□ -2.39
SAMSN1-202ENST00000400564 COL12A1Q99715 3063 aa0.13□□□□□ -2.39
SAMSN1-202ENST00000400564 PKHD1P08F94 4074 aa0.12□□□□□ -2.39
SAMSN1-202ENST00000400564 HFM1A2PYH4 1435 aa0.12□□□□□ -2.39
SAMSN1-202ENST00000400564 KRTAP20-1Q3LI63 56 aa0.12□□□□□ -2.39
SAMSN1-202ENST00000400564 UBL5Q9BZL1 73 aa0.12□□□□□ -2.39
SAMSN1-202ENST00000400564 RALGAPBQ86X10 1494 aa0.12□□□□□ -2.39
SAMSN1-202ENST00000400564 DEPDC5O75140 1603 aa0.12□□□□□ -2.39
SAMSN1-202ENST00000400564 LYNX1G3V0Z9 82 aa0.11□□□□□ -2.39
SAMSN1-202ENST00000400564 MRPL33O75394 65 aaKnown RBP0.11□□□□□ -2.39
SAMSN1-202ENST00000400564 CRIP1P50238 77 aa0.11□□□□□ -2.39
SAMSN1-202ENST00000400564 ZZEF1O43149 2961 aa0.11□□□□□ -2.39
SAMSN1-202ENST00000400564 USP9YO00507 2555 aaPredicted RBP0.11□□□□□ -2.39
SAMSN1-202ENST00000400564 ATXN8Q156A1 80 aa0.1□□□□□ -2.39
SAMSN1-202ENST00000400564 GNG13Q9P2W3 67 aa0.1□□□□□ -2.39
SAMSN1-202ENST00000400564 FLGP20930 4061 aaPredicted RBP0.1□□□□□ -2.39
SAMSN1-202ENST00000400564 NF1P21359 2839 aa0.1□□□□□ -2.39
SAMSN1-202ENST00000400564 ZANQ9Y493 2812 aa0.1□□□□□ -2.39
SAMSN1-202ENST00000400564 FAT3Q8TDW7 4589 aa0.09□□□□□ -2.39
SAMSN1-202ENST00000400564 SPRR2BP35325 72 aa0.09□□□□□ -2.39
SAMSN1-202ENST00000400564 AKAP9Q99996 3911 aa0.09□□□□□ -2.39
SAMSN1-202ENST00000400564 MROH1Q8NDA8 1641 aa0.09□□□□□ -2.4
SAMSN1-202ENST00000400564 LRRK2Q5S007 2527 aa0.08□□□□□ -2.4
SAMSN1-202ENST00000400564 EFCAB5A4FU69 1503 aa0.08□□□□□ -2.4
SAMSN1-202ENST00000400564 TGP01266 2768 aa0.08□□□□□ -2.4
SAMSN1-202ENST00000400564 SVEP1Q4LDE5 3571 aa0.08□□□□□ -2.4
SAMSN1-202ENST00000400564 NBPF19A0A087WUL8 3843 aa0.07□□□□□ -2.4
SAMSN1-202ENST00000400564 USP9XQ93008 2570 aaPredicted RBP0.07□□□□□ -2.4
SAMSN1-202ENST00000400564 ITPR1Q14643 2758 aa0.06□□□□□ -2.4
SAMSN1-202ENST00000400564 DNAH9Q9NYC9 4486 aa0.06□□□□□ -2.4
SAMSN1-202ENST00000400564 CUBNO60494 3623 aa0.06□□□□□ -2.4
SAMSN1-202ENST00000400564 ACACBO00763 2458 aa0.06□□□□□ -2.4
SAMSN1-202ENST00000400564 MYO18BQ8IUG5 2567 aa0.06□□□□□ -2.4
SAMSN1-202ENST00000400564 GCN1Q92616 2671 aaKnown RBP0.05□□□□□ -2.4
SAMSN1-202ENST00000400564 MXRA5Q9NR99 2828 aa0.05□□□□□ -2.4
SAMSN1-202ENST00000400564 ITPR3Q14573 2671 aa0.05□□□□□ -2.4
SAMSN1-202ENST00000400564 ETDCA0A1B0GVM5 59 aa0.05□□□□□ -2.4
SAMSN1-202ENST00000400564 DEFB130BP0DP73 79 aa0.05□□□□□ -2.4
SAMSN1-202ENST00000400564 DEFB130AP0DP74 79 aa0.05□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms