RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 CSMD3Q7Z407 3707 aa10.95□□□□□ -0.66
PTPRA-205ENST00000399903 MRPL55Q7Z7F7 128 aaKnown RBP10.95□□□□□ -0.66
PTPRA-205ENST00000399903 NDUFB1O75438 58 aa10.95□□□□□ -0.66
PTPRA-205ENST00000399903 C11orf45Q8TAV5 145 aa10.94□□□□□ -0.66
PTPRA-205ENST00000399903 LINC00476Q8WZB0 136 aa10.94□□□□□ -0.66
PTPRA-205ENST00000399903 LCE6AA0A183 80 aa10.94□□□□□ -0.66
PTPRA-205ENST00000399903 LYSTQ99698 3801 aa10.94□□□□□ -0.66
PTPRA-205ENST00000399903 H0Y9P7 68 aa10.93□□□□□ -0.66
PTPRA-205ENST00000399903 A0A096LNI7 61 aa10.92□□□□□ -0.66
PTPRA-205ENST00000399903 CYP4F30PQ9H0H9 118 aa10.92□□□□□ -0.66
PTPRA-205ENST00000399903 UBE2AP49459 152 aa10.91□□□□□ -0.66
PTPRA-205ENST00000399903 KRTAP26-1Q6PEX3 210 aa10.91□□□□□ -0.66
PTPRA-205ENST00000399903 HUWE1Q7Z6Z7 4374 aaKnown RBP10.9□□□□□ -0.66
PTPRA-205ENST00000399903 COL7A1Q02388 2944 aa10.9□□□□□ -0.66
PTPRA-205ENST00000399903 C16orf90A8MZG2 172 aa10.89□□□□□ -0.67
PTPRA-205ENST00000399903 SRRM2Q9UQ35 2752 aaKnown RBP10.89□□□□□ -0.67
PTPRA-205ENST00000399903 PRLHP81277 87 aa10.88□□□□□ -0.67
PTPRA-205ENST00000399903 DNAH3Q8TD57 4116 aa10.88□□□□□ -0.67
PTPRA-205ENST00000399903 SPRR4Q96PI1 79 aa10.88□□□□□ -0.67
PTPRA-205ENST00000399903 CD164Q04900 197 aa10.87□□□□□ -0.67
PTPRA-205ENST00000399903 TNP2Q05952 138 aa10.87□□□□□ -0.67
PTPRA-205ENST00000399903 PCOTHQ58A44 107 aa10.87□□□□□ -0.67
PTPRA-205ENST00000399903 Q8N9P0 234 aaPredicted RBP10.87□□□□□ -0.67
PTPRA-205ENST00000399903 IGLV1-50A0A075B6I6 118 aa10.86□□□□□ -0.67
PTPRA-205ENST00000399903 IGFL1Q6UW32 110 aa10.86□□□□□ -0.67
PTPRA-205ENST00000399903 CASC2Q6XLA1 102 aa10.86□□□□□ -0.67
PTPRA-205ENST00000399903 CASC10Q5T4H9 136 aa10.85□□□□□ -0.67
PTPRA-205ENST00000399903 IGKV2-24A0A0C4DH68 120 aa10.84□□□□□ -0.67
PTPRA-205ENST00000399903 H0Y9J4 135 aa10.83□□□□□ -0.68
PTPRA-205ENST00000399903 K7EIL1 84 aa10.83□□□□□ -0.68
PTPRA-205ENST00000399903 A0A1B0GW54 56 aa10.82□□□□□ -0.68
PTPRA-205ENST00000399903 LIMD2Q9BT23 127 aa10.82□□□□□ -0.68
PTPRA-205ENST00000399903 RBM12B-AS1Q9P1G2 102 aa10.81□□□□□ -0.68
PTPRA-205ENST00000399903 SPAG11AQ6PDA7 123 aa10.8□□□□□ -0.68
PTPRA-205ENST00000399903 DNAH10Q8IVF4 4471 aa10.8□□□□□ -0.68
PTPRA-205ENST00000399903 KRTAP4-16G5E9R7 235 aaPredicted RBP10.79□□□□□ -0.68
PTPRA-205ENST00000399903 REG3GQ6UW15 175 aa10.79□□□□□ -0.68
PTPRA-205ENST00000399903 KTN1-AS1Q86SY8 53 aa10.79□□□□□ -0.68
PTPRA-205ENST00000399903 LINC00588Q9Y4M8 146 aa10.79□□□□□ -0.68
PTPRA-205ENST00000399903 LCA10Q71F78 164 aa10.79□□□□□ -0.68
PTPRA-205ENST00000399903 COA5Q86WW8 74 aa10.78□□□□□ -0.68
PTPRA-205ENST00000399903 KRTAP7-1Q8IUC3 87 aa10.76□□□□□ -0.69
PTPRA-205ENST00000399903 MDFIQ99750 246 aa10.74□□□□□ -0.69
PTPRA-205ENST00000399903 H3BNG1 76 aa10.73□□□□□ -0.69
PTPRA-205ENST00000399903 SPRR1AP35321 89 aa10.73□□□□□ -0.69
PTPRA-205ENST00000399903 LINC01556Q5JQF7 62 aa10.72□□□□□ -0.69
PTPRA-205ENST00000399903 NDUFS5O43920 106 aa10.72□□□□□ -0.69
PTPRA-205ENST00000399903 CNBPP62633 177 aaKnown RBP10.71□□□□□ -0.7
PTPRA-205ENST00000399903 ATP11AUNQ6ZP68 121 aa10.69□□□□□ -0.7
PTPRA-205ENST00000399903 DNAH9Q9NYC9 4486 aa10.68□□□□□ -0.7
PTPRA-205ENST00000399903 SPANXA2-OT1Q8N9U9 137 aa10.68□□□□□ -0.7
PTPRA-205ENST00000399903 KRTAP29-1A8MX34 341 aaPredicted RBP10.67□□□□□ -0.7
PTPRA-205ENST00000399903 DNAH7Q8WXX0 4024 aa10.66□□□□□ -0.7
PTPRA-205ENST00000399903 LOC101927531A0A1B0GV80 90 aa10.64□□□□□ -0.71
PTPRA-205ENST00000399903 DNAH10OSP0CZ25 163 aa10.64□□□□□ -0.71
PTPRA-205ENST00000399903 Q75L30 129 aa10.64□□□□□ -0.71
PTPRA-205ENST00000399903 TLX1NBP0CAT3 122 aa10.63□□□□□ -0.71
PTPRA-205ENST00000399903 C4orf48Q5BLP8 95 aa10.63□□□□□ -0.71
PTPRA-205ENST00000399903 PLA2G2DQ9UNK4 145 aa10.63□□□□□ -0.71
PTPRA-205ENST00000399903 A8MWP4 228 aa10.63□□□□□ -0.71
PTPRA-205ENST00000399903 C9orf163Q8N9P6 203 aa10.61□□□□□ -0.71
PTPRA-205ENST00000399903 KRTAP1-5Q9BYS1 174 aa10.61□□□□□ -0.71
PTPRA-205ENST00000399903 SPINK7P58062 85 aa10.6□□□□□ -0.71
PTPRA-205ENST00000399903 DNAH1Q9P2D7 4330 aa10.6□□□□□ -0.71
PTPRA-205ENST00000399903 PLECQ15149 4684 aaKnown RBP10.6□□□□□ -0.71
PTPRA-205ENST00000399903 IGLV5-37A0A075B6J1 123 aa10.59□□□□□ -0.71
PTPRA-205ENST00000399903 H3BPC8 53 aa10.59□□□□□ -0.71
PTPRA-205ENST00000399903 A6NN06 94 aa10.59□□□□□ -0.71
PTPRA-205ENST00000399903 MOBPQ13875 183 aa10.59□□□□□ -0.71
PTPRA-205ENST00000399903 CDC42SE1Q9NRR8 79 aa10.59□□□□□ -0.71
PTPRA-205ENST00000399903 CHTF8P0CG12 524 aa10.58□□□□□ -0.72
PTPRA-205ENST00000399903 PHF5AQ7RTV0 110 aaKnown RBP10.57□□□□□ -0.72
PTPRA-205ENST00000399903 UBE2DNLQ8IWF7 75 aa10.56□□□□□ -0.72
PTPRA-205ENST00000399903 DNHD1Q96M86 4753 aa10.56□□□□□ -0.72
PTPRA-205ENST00000399903 IGLV7-46A0A075B6I9 117 aa10.56□□□□□ -0.72
PTPRA-205ENST00000399903 IGLV9-49A0A0B4J1Y8 123 aa10.56□□□□□ -0.72
PTPRA-205ENST00000399903 PRKDCP78527 4128 aaKnown RBP10.55□□□□□ -0.72
PTPRA-205ENST00000399903 C7orf65Q6ZTY9 151 aa10.55□□□□□ -0.72
PTPRA-205ENST00000399903 IGHV6-1A0A0B4J1U7 121 aa10.53□□□□□ -0.72
PTPRA-205ENST00000399903 PRAC1Q96KF2 57 aa10.53□□□□□ -0.72
PTPRA-205ENST00000399903 LINC00472Q9H8W2 130 aa10.53□□□□□ -0.72
PTPRA-205ENST00000399903 MMP24-AS1A0A0U1RRL7 71 aa10.53□□□□□ -0.72
PTPRA-205ENST00000399903 TGP01266 2768 aa10.52□□□□□ -0.73
PTPRA-205ENST00000399903 PRR26Q8N8Z3 221 aa10.5□□□□□ -0.73
PTPRA-205ENST00000399903 KRTAP11-1Q8IUC1 163 aa10.5□□□□□ -0.73
PTPRA-205ENST00000399903 MEGF8Q7Z7M0 2845 aa10.47□□□□□ -0.73
PTPRA-205ENST00000399903 HRES1P13985 223 aa10.47□□□□□ -0.73
PTPRA-205ENST00000399903 LINC01558Q9Y6Z2 57 aa10.46□□□□□ -0.73
PTPRA-205ENST00000399903 STARD9Q9P2P6 4700 aa10.46□□□□□ -0.73
PTPRA-205ENST00000399903 IGLV8-61A0A075B6I0 122 aa10.46□□□□□ -0.74
PTPRA-205ENST00000399903 CDK2AP2O75956 126 aa10.45□□□□□ -0.74
PTPRA-205ENST00000399903 APLNQ9ULZ1 77 aa10.42□□□□□ -0.74
PTPRA-205ENST00000399903 ADM2Q7Z4H4 148 aa10.41□□□□□ -0.74
PTPRA-205ENST00000399903 SPINK6Q6UWN8 80 aa10.41□□□□□ -0.74
PTPRA-205ENST00000399903 LINC00313P59037 77 aa10.4□□□□□ -0.74
PTPRA-205ENST00000399903 C8orf17Q9NRJ1 99 aa10.4□□□□□ -0.75
PTPRA-205ENST00000399903 KMT2AQ03164 3969 aa10.38□□□□□ -0.75
PTPRA-205ENST00000399903 TP53AIP1Q9HCN2 124 aa10.36□□□□□ -0.75
PTPRA-205ENST00000399903 ANAPC11Q9NYG5 84 aa10.35□□□□□ -0.75
PTPRA-205ENST00000399903 RETNLBQ9BQ08 111 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms