RNA–Protein interactions for RNA: ENST00000399537.8

TNRC18-203, Transcript of trinucleotide repeat containing 18, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TNRC18, Length 10,572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-203ENST00000399537 CASC10Q5T4H9 136 aa9.22□□□□□ -0.93
TNRC18-203ENST00000399537 PRR26Q8N8Z3 221 aa9.21□□□□□ -0.93
TNRC18-203ENST00000399537 OCR1Q9BZK8 76 aa9.21□□□□□ -0.94
TNRC18-203ENST00000399537 CAMK2N1Q7Z7J9 78 aa9.2□□□□□ -0.94
TNRC18-203ENST00000399537 MGAQ8IWI9 3026 aa9.19□□□□□ -0.94
TNRC18-203ENST00000399537 Q6ZSA8 131 aa9.18□□□□□ -0.94
TNRC18-203ENST00000399537 KRTAP10-3P60369 221 aa9.18□□□□□ -0.94
TNRC18-203ENST00000399537 DMAC1Q96GE9 116 aa9.18□□□□□ -0.94
TNRC18-203ENST00000399537 A0A1B0GU33 70 aa9.17□□□□□ -0.94
TNRC18-203ENST00000399537 C5orf42Q9H799 3197 aa9.16□□□□□ -0.94
TNRC18-203ENST00000399537 Q75L30 129 aa9.16□□□□□ -0.94
TNRC18-203ENST00000399537 A0A096LNT2 108 aa9.15□□□□□ -0.95
TNRC18-203ENST00000399537 M0R2T5 61 aa9.14□□□□□ -0.95
TNRC18-203ENST00000399537 GOLGB1Q14789 3259 aaKnown RBP9.12□□□□□ -0.95
TNRC18-203ENST00000399537 IGLV7-46A0A075B6I9 117 aa9.1□□□□□ -0.95
TNRC18-203ENST00000399537 S4R3F8 94 aa9.09□□□□□ -0.95
TNRC18-203ENST00000399537 HRES1P13985 223 aa9.08□□□□□ -0.96
TNRC18-203ENST00000399537 FAM229BQ4G0N7 80 aa9.05□□□□□ -0.96
TNRC18-203ENST00000399537 LRBAP50851 2863 aa9.05□□□□□ -0.96
TNRC18-203ENST00000399537 CHD7Q9P2D1 2997 aa9.05□□□□□ -0.96
TNRC18-203ENST00000399537 HIVEP1P15822 2718 aa9.04□□□□□ -0.96
TNRC18-203ENST00000399537 ASB16-AS1Q495Z4 193 aa9.03□□□□□ -0.96
TNRC18-203ENST00000399537 Q5XG85 94 aa9.02□□□□□ -0.96
TNRC18-203ENST00000399537 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9□□□□□ -0.97
TNRC18-203ENST00000399537 CYSTM1Q9H1C7 97 aa9□□□□□ -0.97
TNRC18-203ENST00000399537 CHD9Q3L8U1 2897 aa8.99□□□□□ -0.97
TNRC18-203ENST00000399537 ZCCHC13Q8WW36 166 aaKnown RBP8.99□□□□□ -0.97
TNRC18-203ENST00000399537 TNP2Q05952 138 aa8.97□□□□□ -0.97
TNRC18-203ENST00000399537 FP248Q71RG6 208 aaPredicted RBP8.95□□□□□ -0.98
TNRC18-203ENST00000399537 CSAG1Q6PB30 78 aa8.94□□□□□ -0.98
TNRC18-203ENST00000399537 PRAC1Q96KF2 57 aa8.94□□□□□ -0.98
TNRC18-203ENST00000399537 PCNTO95613 3336 aa8.94□□□□□ -0.98
TNRC18-203ENST00000399537 Q8N9P0 234 aaPredicted RBP8.92□□□□□ -0.98
TNRC18-203ENST00000399537 MMP24-AS1A0A0U1RRL7 71 aa8.9□□□□□ -0.98
TNRC18-203ENST00000399537 Q5VV11 94 aa8.89□□□□□ -0.99
TNRC18-203ENST00000399537 Q5W150 140 aa8.89□□□□□ -0.99
TNRC18-203ENST00000399537 LINC01558Q9Y6Z2 57 aa8.89□□□□□ -0.99
TNRC18-203ENST00000399537 FRYQ5TBA9 3013 aa8.89□□□□□ -0.99
TNRC18-203ENST00000399537 KRTAP1-3Q8IUG1 177 aa8.88□□□□□ -0.99
TNRC18-203ENST00000399537 SPINK7P58062 85 aa8.87□□□□□ -0.99
TNRC18-203ENST00000399537 Q8NDZ9 215 aa8.86□□□□□ -0.99
TNRC18-203ENST00000399537 R4GN34 69 aa8.85□□□□□ -0.99
TNRC18-203ENST00000399537 KRTAP1-1Q07627 177 aa8.85□□□□□ -0.99
TNRC18-203ENST00000399537 NIPBLQ6KC79 2804 aaeCLIP8.84□□□□□ -0.99
TNRC18-203ENST00000399537 KRTAP16-1A8MUX0 517 aa8.84□□□□□ -1
TNRC18-203ENST00000399537 LAMA2P24043 3122 aaKnown RBP8.82□□□□□ -1
TNRC18-203ENST00000399537 PLAC8Q9NZF1 115 aa8.81□□□□□ -1
TNRC18-203ENST00000399537 FRYLO94915 3013 aa8.8□□□□□ -1
TNRC18-203ENST00000399537 CELSR2Q9HCU4 2923 aa8.79□□□□□ -1
TNRC18-203ENST00000399537 KALRNO60229 2985 aa8.79□□□□□ -1
TNRC18-203ENST00000399537 NF1P21359 2839 aa8.79□□□□□ -1
TNRC18-203ENST00000399537 NBEAQ8NFP9 2946 aa8.78□□□□□ -1
TNRC18-203ENST00000399537 ASH1LQ9NR48 2969 aaKnown RBP8.78□□□□□ -1
TNRC18-203ENST00000399537 TENM1Q9UKZ4 2725 aa8.77□□□□□ -1.01
TNRC18-203ENST00000399537 ROMO1P60602 79 aa8.76□□□□□ -1.01
TNRC18-203ENST00000399537 TACC2O95359 2948 aa8.74□□□□□ -1.01
TNRC18-203ENST00000399537 OXTP01178 125 aa8.74□□□□□ -1.01
TNRC18-203ENST00000399537 SEC61BP60468 96 aaKnown RBP8.73□□□□□ -1.01
TNRC18-203ENST00000399537 LINC00472Q9H8W2 130 aa8.73□□□□□ -1.01
TNRC18-203ENST00000399537 ZANQ9Y493 2812 aa8.73□□□□□ -1.01
TNRC18-203ENST00000399537 TENM3Q9P273 2699 aa8.73□□□□□ -1.01
TNRC18-203ENST00000399537 M0QZ58 72 aa8.72□□□□□ -1.01
TNRC18-203ENST00000399537 SPRR1AP35321 89 aa8.71□□□□□ -1.01
TNRC18-203ENST00000399537 TRIOO75962 3097 aa8.7□□□□□ -1.02
TNRC18-203ENST00000399537 RPL37P61927 97 aaKnown RBP8.7□□□□□ -1.02
TNRC18-203ENST00000399537 Q5VSD8 79 aa8.7□□□□□ -1.02
TNRC18-203ENST00000399537 VPS13AQ96RL7 3174 aa8.69□□□□□ -1.02
TNRC18-203ENST00000399537 H1FX-AS1Q4G0G2 97 aa8.69□□□□□ -1.02
TNRC18-203ENST00000399537 UTRNP46939 3433 aa8.64□□□□□ -1.03
TNRC18-203ENST00000399537 ADM2Q7Z4H4 148 aa8.64□□□□□ -1.03
TNRC18-203ENST00000399537 PLAC4Q8WY50 150 aa8.63□□□□□ -1.03
TNRC18-203ENST00000399537 SPRR1BP22528 89 aa8.62□□□□□ -1.03
TNRC18-203ENST00000399537 ZZEF1O43149 2961 aa8.6□□□□□ -1.03
TNRC18-203ENST00000399537 KRTAP26-1Q6PEX3 210 aa8.6□□□□□ -1.03
TNRC18-203ENST00000399537 RANBP2P49792 3224 aaKnown RBP8.59□□□□□ -1.03
TNRC18-203ENST00000399537 WDFY4Q6ZS81 3184 aa8.58□□□□□ -1.04
TNRC18-203ENST00000399537 KRTAP1-5Q9BYS1 174 aa8.57□□□□□ -1.04
TNRC18-203ENST00000399537 PRUNE2Q8WUY3 3088 aa8.56□□□□□ -1.04
TNRC18-203ENST00000399537 SPATA8Q6RVD6 105 aa8.55□□□□□ -1.04
TNRC18-203ENST00000399537 KRTAP10-1P60331 282 aa8.53□□□□□ -1.04
TNRC18-203ENST00000399537 Q6ZR54 194 aa8.53□□□□□ -1.04
TNRC18-203ENST00000399537 DMXL2Q8TDJ6 3036 aa8.52□□□□□ -1.05
TNRC18-203ENST00000399537 DCHS2Q6V1P9 2916 aa8.51□□□□□ -1.05
TNRC18-203ENST00000399537 PANO1I0J062 215 aa8.5□□□□□ -1.05
TNRC18-203ENST00000399537 A0A087X002 238 aa8.49□□□□□ -1.05
TNRC18-203ENST00000399537 KRTAP10-2P60368 255 aa8.48□□□□□ -1.05
TNRC18-203ENST00000399537 TNRC18O15417 2968 aaPredicted RBP8.48□□□□□ -1.05
TNRC18-203ENST00000399537 PDZD2O15018 2839 aa8.45□□□□□ -1.06
TNRC18-203ENST00000399537 TENM4Q6N022 2769 aa8.45□□□□□ -1.06
TNRC18-203ENST00000399537 FBN2P35556 2912 aa8.43□□□□□ -1.06
TNRC18-203ENST00000399537 LCE6AA0A183 80 aa8.43□□□□□ -1.06
TNRC18-203ENST00000399537 CRYBG3Q68DQ2 2970 aa8.42□□□□□ -1.06
TNRC18-203ENST00000399537 KRTAP4-16G5E9R7 235 aaPredicted RBP8.42□□□□□ -1.06
TNRC18-203ENST00000399537 KRTAP29-1A8MX34 341 aaPredicted RBP8.42□□□□□ -1.06
TNRC18-203ENST00000399537 TGP01266 2768 aa8.41□□□□□ -1.06
TNRC18-203ENST00000399537 HRNRQ86YZ3 2850 aaPredicted RBP8.4□□□□□ -1.06
TNRC18-203ENST00000399537 COL12A1Q99715 3063 aa8.36□□□□□ -1.07
TNRC18-203ENST00000399537 A6NN06 94 aa8.34□□□□□ -1.07
TNRC18-203ENST00000399537 C20orf166-AS1Q96NR2 134 aa8.34□□□□□ -1.07
TNRC18-203ENST00000399537 HTTP42858 3142 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms