RNA–Protein interactions for RNA: ENST00000397491.6

CHL1-202, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 1 (best) BASIC

Gene CHL1, Length 5,235 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-202ENST00000397491 CNBPP62633 177 aaKnown RBP9.54□□□□□ -0.88
CHL1-202ENST00000397491 IGLV5-37A0A075B6J1 123 aa9.53□□□□□ -0.88
CHL1-202ENST00000397491 A0A0D9SG42 100 aa9.53□□□□□ -0.88
CHL1-202ENST00000397491 NBEAL1Q6ZS30 2694 aa9.52□□□□□ -0.89
CHL1-202ENST00000397491 SPINK7P58062 85 aa9.5□□□□□ -0.89
CHL1-202ENST00000397491 HRES1P13985 223 aa9.48□□□□□ -0.89
CHL1-202ENST00000397491 VPS13AQ96RL7 3174 aa9.47□□□□□ -0.89
CHL1-202ENST00000397491 C9orf92A6NGG3 77 aa9.47□□□□□ -0.89
CHL1-202ENST00000397491 CSAG1Q6PB30 78 aa9.46□□□□□ -0.89
CHL1-202ENST00000397491 PSORS1C2Q9UIG4 136 aa9.46□□□□□ -0.9
CHL1-202ENST00000397491 UNC79Q9P2D8 2635 aa9.45□□□□□ -0.9
CHL1-202ENST00000397491 MMP24-AS1A0A0U1RRL7 71 aa9.45□□□□□ -0.9
CHL1-202ENST00000397491 KRTAP10-11P60412 298 aa9.45□□□□□ -0.9
CHL1-202ENST00000397491 UBR5O95071 2799 aaPredicted RBP9.44□□□□□ -0.9
CHL1-202ENST00000397491 KRTAP10-3P60369 221 aa9.43□□□□□ -0.9
CHL1-202ENST00000397491 BAHCC1Q9P281 2608 aa9.43□□□□□ -0.9
CHL1-202ENST00000397491 K7EIL1 84 aa9.42□□□□□ -0.9
CHL1-202ENST00000397491 A0A1B0GU33 70 aa9.41□□□□□ -0.9
CHL1-202ENST00000397491 LINC00304Q8N9R0 145 aa9.41□□□□□ -0.9
CHL1-202ENST00000397491 IGLV7-43P04211 117 aa9.41□□□□□ -0.9
CHL1-202ENST00000397491 WWC2-AS2Q96NR7 200 aa9.39□□□□□ -0.91
CHL1-202ENST00000397491 KRTAP1-3Q8IUG1 177 aa9.39□□□□□ -0.91
CHL1-202ENST00000397491 IGSF10Q6WRI0 2623 aa9.39□□□□□ -0.91
CHL1-202ENST00000397491 GCN1Q92616 2671 aaKnown RBP9.38□□□□□ -0.91
CHL1-202ENST00000397491 A0A087WTM6 91 aa9.38□□□□□ -0.91
CHL1-202ENST00000397491 LUZP6Q538Z0 58 aa9.35□□□□□ -0.91
CHL1-202ENST00000397491 KRTAP1-1Q07627 177 aa9.34□□□□□ -0.91
CHL1-202ENST00000397491 SPRR1AP35321 89 aa9.33□□□□□ -0.92
CHL1-202ENST00000397491 LINC00472Q9H8W2 130 aa9.31□□□□□ -0.92
CHL1-202ENST00000397491 NSD1Q96L73 2696 aaPredicted RBP9.29□□□□□ -0.92
CHL1-202ENST00000397491 FRYQ5TBA9 3013 aa9.28□□□□□ -0.92
CHL1-202ENST00000397491 REV3LO60673 3130 aa9.27□□□□□ -0.92
CHL1-202ENST00000397491 FLNCQ14315 2725 aa9.27□□□□□ -0.93
CHL1-202ENST00000397491 TACC2O95359 2948 aa9.26□□□□□ -0.93
CHL1-202ENST00000397491 CDH23Q9H251 3354 aa9.24□□□□□ -0.93
CHL1-202ENST00000397491 Q5W150 140 aa9.23□□□□□ -0.93
CHL1-202ENST00000397491 NBEAL2Q6ZNJ1 2754 aa9.22□□□□□ -0.93
CHL1-202ENST00000397491 DMAC1Q96GE9 116 aa9.21□□□□□ -0.93
CHL1-202ENST00000397491 FRYLO94915 3013 aa9.21□□□□□ -0.94
CHL1-202ENST00000397491 FREM2Q5SZK8 3169 aa9.2□□□□□ -0.94
CHL1-202ENST00000397491 ZCCHC13Q8WW36 166 aaKnown RBP9.2□□□□□ -0.94
CHL1-202ENST00000397491 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.18□□□□□ -0.94
CHL1-202ENST00000397491 TNP2Q05952 138 aa9.18□□□□□ -0.94
CHL1-202ENST00000397491 SPRR1BP22528 89 aa9.17□□□□□ -0.94
CHL1-202ENST00000397491 DMXL2Q8TDJ6 3036 aa9.16□□□□□ -0.94
CHL1-202ENST00000397491 CELSR3Q9NYQ7 3312 aa9.16□□□□□ -0.94
CHL1-202ENST00000397491 SMR3BP02814 79 aaPredicted RBP9.16□□□□□ -0.94
CHL1-202ENST00000397491 ITPR1Q14643 2758 aa9.15□□□□□ -0.94
CHL1-202ENST00000397491 ATMQ13315 3056 aa9.14□□□□□ -0.95
CHL1-202ENST00000397491 A6NN06 94 aa9.14□□□□□ -0.95
CHL1-202ENST00000397491 KRTAP26-1Q6PEX3 210 aa9.13□□□□□ -0.95
CHL1-202ENST00000397491 STAB2Q8WWQ8 2551 aa9.13□□□□□ -0.95
CHL1-202ENST00000397491 ASB16-AS1Q495Z4 193 aa9.13□□□□□ -0.95
CHL1-202ENST00000397491 LAMA1P25391 3075 aa9.12□□□□□ -0.95
CHL1-202ENST00000397491 COL12A1Q99715 3063 aa9.12□□□□□ -0.95
CHL1-202ENST00000397491 KRTAP29-1A8MX34 341 aaPredicted RBP9.11□□□□□ -0.95
CHL1-202ENST00000397491 BOD1L1Q8NFC6 3051 aa9.11□□□□□ -0.95
CHL1-202ENST00000397491 COX6B2Q6YFQ2 88 aa9.09□□□□□ -0.95
CHL1-202ENST00000397491 A0A0A0MQY5 61 aa9.08□□□□□ -0.96
CHL1-202ENST00000397491 Q6ZR54 194 aa9.08□□□□□ -0.96
CHL1-202ENST00000397491 FLG2Q5D862 2391 aaPredicted RBP9.07□□□□□ -0.96
CHL1-202ENST00000397491 SZT2Q5T011 3432 aa9.06□□□□□ -0.96
CHL1-202ENST00000397491 A8MU10 97 aa9.06□□□□□ -0.96
CHL1-202ENST00000397491 ITPR2Q14571 2701 aa9.05□□□□□ -0.96
CHL1-202ENST00000397491 ROMO1P60602 79 aa9.04□□□□□ -0.96
CHL1-202ENST00000397491 J3QL48 77 aa9.02□□□□□ -0.96
CHL1-202ENST00000397491 DMBT1Q9UGM3 2413 aaPredicted RBP9.02□□□□□ -0.97
CHL1-202ENST00000397491 KRTAP4-16G5E9R7 235 aaPredicted RBP9.01□□□□□ -0.97
CHL1-202ENST00000397491 SPATA8Q6RVD6 105 aa9.01□□□□□ -0.97
CHL1-202ENST00000397491 NBEAQ8NFP9 2946 aa9.01□□□□□ -0.97
CHL1-202ENST00000397491 RPL37P61927 97 aaKnown RBP9□□□□□ -0.97
CHL1-202ENST00000397491 CAMK2N1Q7Z7J9 78 aa9□□□□□ -0.97
CHL1-202ENST00000397491 VCANP13611 3396 aa8.99□□□□□ -0.97
CHL1-202ENST00000397491 ADGRG4Q8IZF6 3080 aa8.99□□□□□ -0.97
CHL1-202ENST00000397491 KALRNO60229 2985 aa8.99□□□□□ -0.97
CHL1-202ENST00000397491 LCE6AA0A183 80 aa8.99□□□□□ -0.97
CHL1-202ENST00000397491 ADM2Q7Z4H4 148 aa8.98□□□□□ -0.97
CHL1-202ENST00000397491 ZZEF1O43149 2961 aa8.97□□□□□ -0.97
CHL1-202ENST00000397491 H1FX-AS1Q4G0G2 97 aa8.97□□□□□ -0.97
CHL1-202ENST00000397491 PLAC8Q9NZF1 115 aa8.97□□□□□ -0.97
CHL1-202ENST00000397491 COL6A3P12111 3177 aa8.97□□□□□ -0.97
CHL1-202ENST00000397491 LINC00483Q53H64 154 aa8.96□□□□□ -0.97
CHL1-202ENST00000397491 HIVEP1P15822 2718 aa8.94□□□□□ -0.98
CHL1-202ENST00000397491 ASH1LQ9NR48 2969 aaKnown RBP8.93□□□□□ -0.98
CHL1-202ENST00000397491 S4R3F8 94 aa8.92□□□□□ -0.98
CHL1-202ENST00000397491 UTP20O75691 2785 aaKnown RBP8.91□□□□□ -0.98
CHL1-202ENST00000397491 KRTAP1-5Q9BYS1 174 aa8.89□□□□□ -0.99
CHL1-202ENST00000397491 TENM4Q6N022 2769 aa8.89□□□□□ -0.99
CHL1-202ENST00000397491 KRTAP16-1A8MUX0 517 aa8.89□□□□□ -0.99
CHL1-202ENST00000397491 KRTAP25-1Q3LHN0 102 aa8.89□□□□□ -0.99
CHL1-202ENST00000397491 KMT2BQ9UMN6 2715 aaPredicted RBP8.88□□□□□ -0.99
CHL1-202ENST00000397491 Q6ZSA8 131 aa8.87□□□□□ -0.99
CHL1-202ENST00000397491 A0A087X002 238 aa8.86□□□□□ -0.99
CHL1-202ENST00000397491 NOTCH2NLQ7Z3S9 236 aa8.86□□□□□ -0.99
CHL1-202ENST00000397491 EYSQ5T1H1 3165 aa8.85□□□□□ -0.99
CHL1-202ENST00000397491 CFAP47Q6ZTR5 3102 aa8.84□□□□□ -0.99
CHL1-202ENST00000397491 CELSR2Q9HCU4 2923 aa8.83□□□□□ -1
CHL1-202ENST00000397491 R4GN34 69 aa8.79□□□□□ -1
CHL1-202ENST00000397491 CRYBG3Q68DQ2 2970 aa8.78□□□□□ -1
CHL1-202ENST00000397491 LRBAP50851 2863 aa8.77□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms