RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 PSCAO43653 123 aa9.86□□□□□ -0.83
HOXA3-202ENST00000396352 HCG22E2RYF7 251 aa9.85□□□□□ -0.83
HOXA3-202ENST00000396352 DEFB116Q30KQ4 102 aa9.83□□□□□ -0.84
HOXA3-202ENST00000396352 COL7A1Q02388 2944 aa9.83□□□□□ -0.84
HOXA3-202ENST00000396352 COL6A5A8TX70 2615 aa9.83□□□□□ -0.84
HOXA3-202ENST00000396352 KRTAP11-1Q8IUC1 163 aa9.82□□□□□ -0.84
HOXA3-202ENST00000396352 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.81□□□□□ -0.84
HOXA3-202ENST00000396352 A0A087WSZ3 146 aa9.81□□□□□ -0.84
HOXA3-202ENST00000396352 SRRM2Q9UQ35 2752 aaKnown RBP9.81□□□□□ -0.84
HOXA3-202ENST00000396352 PRO0628Q9UI54 55 aa9.78□□□□□ -0.84
HOXA3-202ENST00000396352 MPLKIPQ8TAP9 179 aa9.78□□□□□ -0.84
HOXA3-202ENST00000396352 DNAH7Q8WXX0 4024 aa9.78□□□□□ -0.84
HOXA3-202ENST00000396352 CHTF8P0CG12 524 aa9.78□□□□□ -0.84
HOXA3-202ENST00000396352 UBE2AP49459 152 aa9.78□□□□□ -0.84
HOXA3-202ENST00000396352 PHF5AQ7RTV0 110 aaKnown RBP9.78□□□□□ -0.84
HOXA3-202ENST00000396352 hDV103S1A0JD37 113 aa9.77□□□□□ -0.85
HOXA3-202ENST00000396352 STAB2Q8WWQ8 2551 aa9.76□□□□□ -0.85
HOXA3-202ENST00000396352 RPL37AP61513 92 aaKnown RBP9.76□□□□□ -0.85
HOXA3-202ENST00000396352 WFDC13Q8IUB5 93 aa9.76□□□□□ -0.85
HOXA3-202ENST00000396352 SPRR1BP22528 89 aa9.74□□□□□ -0.85
HOXA3-202ENST00000396352 CSMD3Q7Z407 3707 aa9.74□□□□□ -0.85
HOXA3-202ENST00000396352 H0Y9J4 135 aa9.74□□□□□ -0.85
HOXA3-202ENST00000396352 DYNC2H1Q8NCM8 4307 aaKnown RBP9.74□□□□□ -0.85
HOXA3-202ENST00000396352 KRTAP29-1A8MX34 341 aaPredicted RBP9.74□□□□□ -0.85
HOXA3-202ENST00000396352 C1orf64Q8NEQ6 169 aa9.74□□□□□ -0.85
HOXA3-202ENST00000396352 APLNQ9ULZ1 77 aa9.72□□□□□ -0.85
HOXA3-202ENST00000396352 C14orf177Q52M58 125 aa9.71□□□□□ -0.86
HOXA3-202ENST00000396352 UBE2DNLQ8IWF7 75 aa9.71□□□□□ -0.86
HOXA3-202ENST00000396352 CYP4F30PQ9H0H9 118 aa9.69□□□□□ -0.86
HOXA3-202ENST00000396352 LINC00472Q9H8W2 130 aa9.69□□□□□ -0.86
HOXA3-202ENST00000396352 TENM2Q9NT68 2774 aa9.68□□□□□ -0.86
HOXA3-202ENST00000396352 PRR15Q8IV56 129 aa9.68□□□□□ -0.86
HOXA3-202ENST00000396352 C9orf163Q8N9P6 203 aa9.68□□□□□ -0.86
HOXA3-202ENST00000396352 LRCOL1A6NCL2 159 aa9.67□□□□□ -0.86
HOXA3-202ENST00000396352 MGAM2Q2M2H8 2515 aa9.67□□□□□ -0.86
HOXA3-202ENST00000396352 TRAV22A0A0B4J277 110 aa9.66□□□□□ -0.86
HOXA3-202ENST00000396352 A8MWP4 228 aa9.66□□□□□ -0.86
HOXA3-202ENST00000396352 PRR4Q16378 134 aa9.66□□□□□ -0.86
HOXA3-202ENST00000396352 CASC2Q6XLA1 102 aa9.66□□□□□ -0.86
HOXA3-202ENST00000396352 NDUFB1O75438 58 aa9.65□□□□□ -0.86
HOXA3-202ENST00000396352 MP68P56378 58 aa9.65□□□□□ -0.86
HOXA3-202ENST00000396352 BRK1Q8WUW1 75 aa9.65□□□□□ -0.86
HOXA3-202ENST00000396352 PANO1I0J062 215 aa9.65□□□□□ -0.87
HOXA3-202ENST00000396352 KRTAP13-1Q8IUC0 172 aa9.64□□□□□ -0.87
HOXA3-202ENST00000396352 LINC00208Q96KT6 92 aa9.64□□□□□ -0.87
HOXA3-202ENST00000396352 Q1T7F1 81 aa9.63□□□□□ -0.87
HOXA3-202ENST00000396352 B9D2Q9BPU9 175 aa9.63□□□□□ -0.87
HOXA3-202ENST00000396352 PLECQ15149 4684 aaKnown RBP9.62□□□□□ -0.87
HOXA3-202ENST00000396352 H0Y9P7 68 aa9.61□□□□□ -0.87
HOXA3-202ENST00000396352 Q6ZRN7 208 aaPredicted RBP9.6□□□□□ -0.87
HOXA3-202ENST00000396352 PKIGQ9Y2B9 76 aa9.6□□□□□ -0.87
HOXA3-202ENST00000396352 NBDYA0A0U1RRE5 68 aa9.58□□□□□ -0.88
HOXA3-202ENST00000396352 H3BPC8 53 aa9.58□□□□□ -0.88
HOXA3-202ENST00000396352 MMP24-AS1A0A0U1RRL7 71 aa9.57□□□□□ -0.88
HOXA3-202ENST00000396352 SPANXA2-OT1Q8N9U9 137 aa9.55□□□□□ -0.88
HOXA3-202ENST00000396352 Q96NJ1 140 aa9.55□□□□□ -0.88
HOXA3-202ENST00000396352 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.54□□□□□ -0.88
HOXA3-202ENST00000396352 SPACA4Q8TDM5 124 aa9.54□□□□□ -0.88
HOXA3-202ENST00000396352 MDFIQ99750 246 aa9.52□□□□□ -0.89
HOXA3-202ENST00000396352 HECTD4Q9Y4D8 3996 aa9.52□□□□□ -0.89
HOXA3-202ENST00000396352 IGLV9-49A0A0B4J1Y8 123 aa9.51□□□□□ -0.89
HOXA3-202ENST00000396352 PSPHP1O15172 72 aa9.5□□□□□ -0.89
HOXA3-202ENST00000396352 ASB16-AS1Q495Z4 193 aa9.5□□□□□ -0.89
HOXA3-202ENST00000396352 LINC00483Q53H64 154 aa9.5□□□□□ -0.89
HOXA3-202ENST00000396352 STARD9Q9P2P6 4700 aa9.48□□□□□ -0.89
HOXA3-202ENST00000396352 VPS13DQ5THJ4 4388 aa9.48□□□□□ -0.89
HOXA3-202ENST00000396352 MOBPQ13875 183 aa9.46□□□□□ -0.89
HOXA3-202ENST00000396352 FRAS1Q86XX4 4008 aa9.46□□□□□ -0.89
HOXA3-202ENST00000396352 NUPR2A6NF83 97 aa9.46□□□□□ -0.89
HOXA3-202ENST00000396352 J3QL48 77 aa9.44□□□□□ -0.9
HOXA3-202ENST00000396352 PRKDCP78527 4128 aaKnown RBP9.44□□□□□ -0.9
HOXA3-202ENST00000396352 WWC2-AS2Q96NR7 200 aa9.44□□□□□ -0.9
HOXA3-202ENST00000396352 A8MUN3 132 aa9.43□□□□□ -0.9
HOXA3-202ENST00000396352 V9GYY9 64 aa9.43□□□□□ -0.9
HOXA3-202ENST00000396352 C8orf17Q9NRJ1 99 aa9.43□□□□□ -0.9
HOXA3-202ENST00000396352 DNAH8Q96JB1 4490 aa9.43□□□□□ -0.9
HOXA3-202ENST00000396352 A0A087WTM6 91 aa9.42□□□□□ -0.9
HOXA3-202ENST00000396352 IGLV7-46A0A075B6I9 117 aa9.41□□□□□ -0.9
HOXA3-202ENST00000396352 TP53AIP1Q9HCN2 124 aa9.41□□□□□ -0.9
HOXA3-202ENST00000396352 PSORS1C2Q9UIG4 136 aa9.41□□□□□ -0.9
HOXA3-202ENST00000396352 Q8N9P0 234 aaPredicted RBP9.41□□□□□ -0.9
HOXA3-202ENST00000396352 IGLV5-52A0A0A0MRZ9 124 aa9.4□□□□□ -0.9
HOXA3-202ENST00000396352 Q5VV11 94 aa9.39□□□□□ -0.91
HOXA3-202ENST00000396352 Q6ZR54 194 aa9.39□□□□□ -0.91
HOXA3-202ENST00000396352 ZNF706Q9Y5V0 76 aaPredicted RBP9.39□□□□□ -0.91
HOXA3-202ENST00000396352 A0A1B0GVX0 72 aa9.39□□□□□ -0.91
HOXA3-202ENST00000396352 C1orf195Q5TG92 126 aa9.39□□□□□ -0.91
HOXA3-202ENST00000396352 FBN3Q75N90 2809 aa9.39□□□□□ -0.91
HOXA3-202ENST00000396352 ANAPC11Q9NYG5 84 aa9.38□□□□□ -0.91
HOXA3-202ENST00000396352 CD164Q04900 197 aa9.38□□□□□ -0.91
HOXA3-202ENST00000396352 DNAH2Q9P225 4427 aa9.38□□□□□ -0.91
HOXA3-202ENST00000396352 IGHV6-1A0A0B4J1U7 121 aa9.37□□□□□ -0.91
HOXA3-202ENST00000396352 KMT2AQ03164 3969 aa9.37□□□□□ -0.91
HOXA3-202ENST00000396352 RTL8CO15255 209 aa9.37□□□□□ -0.91
HOXA3-202ENST00000396352 PCOTHQ58A44 107 aa9.37□□□□□ -0.91
HOXA3-202ENST00000396352 COA5Q86WW8 74 aa9.37□□□□□ -0.91
HOXA3-202ENST00000396352 DNAH17Q9UFH2 4485 aa9.36□□□□□ -0.91
HOXA3-202ENST00000396352 PLAC8Q9NZF1 115 aa9.35□□□□□ -0.91
HOXA3-202ENST00000396352 ZNF861PO60384 105 aa9.34□□□□□ -0.91
HOXA3-202ENST00000396352 LIMD2Q9BT23 127 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms