RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 HIGD2AQ9BW72 106 aa7.6□□□□□ -1.19
ITGB1-202ENST00000396033 HECTD4Q9Y4D8 3996 aa7.6□□□□□ -1.19
ITGB1-202ENST00000396033 FAM236DA0A1B0GTK5 79 aa7.6□□□□□ -1.19
ITGB1-202ENST00000396033 FAM236CP0DP71 79 aa7.6□□□□□ -1.19
ITGB1-202ENST00000396033 Q6ZVQ6 151 aa7.6□□□□□ -1.19
ITGB1-202ENST00000396033 SPACA4Q8TDM5 124 aa7.6□□□□□ -1.19
ITGB1-202ENST00000396033 WWC2-AS2Q96NR7 200 aa7.6□□□□□ -1.19
ITGB1-202ENST00000396033 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.6□□□□□ -1.19
ITGB1-202ENST00000396033 TGP01266 2768 aa7.59□□□□□ -1.19
ITGB1-202ENST00000396033 DNAH17Q9UFH2 4485 aa7.58□□□□□ -1.2
ITGB1-202ENST00000396033 KLKP1Q107X0 134 aa7.58□□□□□ -1.2
ITGB1-202ENST00000396033 LINC00476Q8WZB0 136 aa7.58□□□□□ -1.2
ITGB1-202ENST00000396033 TNP2Q05952 138 aa7.57□□□□□ -1.2
ITGB1-202ENST00000396033 HAMPP81172 84 aa7.57□□□□□ -1.2
ITGB1-202ENST00000396033 DNAH6Q9C0G6 4158 aa7.57□□□□□ -1.2
ITGB1-202ENST00000396033 UBE2AP49459 152 aa7.56□□□□□ -1.2
ITGB1-202ENST00000396033 C1orf137Q5JT78 98 aa7.56□□□□□ -1.2
ITGB1-202ENST00000396033 PRO0628Q9UI54 55 aa7.56□□□□□ -1.2
ITGB1-202ENST00000396033 IGLV5-52A0A0A0MRZ9 124 aa7.55□□□□□ -1.2
ITGB1-202ENST00000396033 F8WEM9 126 aa7.55□□□□□ -1.2
ITGB1-202ENST00000396033 SERP1Q9Y6X1 66 aa7.55□□□□□ -1.2
ITGB1-202ENST00000396033 H0Y9J4 135 aa7.55□□□□□ -1.2
ITGB1-202ENST00000396033 C3orf84H3BNL1 204 aa7.55□□□□□ -1.2
ITGB1-202ENST00000396033 SMIM29Q86T20 159 aa7.55□□□□□ -1.2
ITGB1-202ENST00000396033 ALMS1Q8TCU4 4167 aa7.54□□□□□ -1.2
ITGB1-202ENST00000396033 BCE1O60756 84 aa7.53□□□□□ -1.2
ITGB1-202ENST00000396033 TRAV7A0A075B6U4 112 aa7.52□□□□□ -1.21
ITGB1-202ENST00000396033 A0A1W2PNM2 257 aa7.52□□□□□ -1.21
ITGB1-202ENST00000396033 CXCL6P80162 114 aa7.52□□□□□ -1.21
ITGB1-202ENST00000396033 SCXQ7RTU7 201 aa7.51□□□□□ -1.21
ITGB1-202ENST00000396033 NREPQ16612 68 aa7.51□□□□□ -1.21
ITGB1-202ENST00000396033 Q8NBF4 154 aa7.51□□□□□ -1.21
ITGB1-202ENST00000396033 KRTAP13-1Q8IUC0 172 aa7.49□□□□□ -1.21
ITGB1-202ENST00000396033 PLAC8Q9NZF1 115 aa7.49□□□□□ -1.21
ITGB1-202ENST00000396033 A0A1B0GW54 56 aa7.48□□□□□ -1.21
ITGB1-202ENST00000396033 Q8N9L7 120 aa7.48□□□□□ -1.21
ITGB1-202ENST00000396033 FRAS1Q86XX4 4008 aa7.47□□□□□ -1.21
ITGB1-202ENST00000396033 IGFL1Q6UW32 110 aa7.47□□□□□ -1.21
ITGB1-202ENST00000396033 SPRR4Q96PI1 79 aa7.47□□□□□ -1.21
ITGB1-202ENST00000396033 A0A0G2JQZ4 141 aa7.47□□□□□ -1.21
ITGB1-202ENST00000396033 SPRR1BP22528 89 aa7.47□□□□□ -1.21
ITGB1-202ENST00000396033 DNAH8Q96JB1 4490 aa7.46□□□□□ -1.21
ITGB1-202ENST00000396033 IGLV8-61A0A075B6I0 122 aa7.46□□□□□ -1.22
ITGB1-202ENST00000396033 SRRM2Q9UQ35 2752 aaKnown RBP7.46□□□□□ -1.22
ITGB1-202ENST00000396033 PSORS1C2Q9UIG4 136 aa7.45□□□□□ -1.22
ITGB1-202ENST00000396033 BPY2O14599 106 aa7.45□□□□□ -1.22
ITGB1-202ENST00000396033 DNAH5Q8TE73 4624 aa7.44□□□□□ -1.22
ITGB1-202ENST00000396033 DNAH11Q96DT5 4516 aa7.44□□□□□ -1.22
ITGB1-202ENST00000396033 KRTAP10-2P60368 255 aa7.44□□□□□ -1.22
ITGB1-202ENST00000396033 A0A0U1RQV1 116 aa7.43□□□□□ -1.22
ITGB1-202ENST00000396033 SMIM26A0A096LP01 95 aa7.43□□□□□ -1.22
ITGB1-202ENST00000396033 HYDINQ4G0P3 5121 aa7.43□□□□□ -1.22
ITGB1-202ENST00000396033 IGKV4-1P06312 121 aa7.4□□□□□ -1.22
ITGB1-202ENST00000396033 MPLKIPQ8TAP9 179 aa7.4□□□□□ -1.22
ITGB1-202ENST00000396033 OCR1Q9BZK8 76 aa7.4□□□□□ -1.22
ITGB1-202ENST00000396033 TMEM254Q8TBM7 123 aa7.39□□□□□ -1.23
ITGB1-202ENST00000396033 BRK1Q8WUW1 75 aa7.39□□□□□ -1.23
ITGB1-202ENST00000396033 A0A087WSZ3 146 aa7.39□□□□□ -1.23
ITGB1-202ENST00000396033 FAT2Q9NYQ8 4349 aa7.39□□□□□ -1.23
ITGB1-202ENST00000396033 ZNF706Q9Y5V0 76 aaPredicted RBP7.39□□□□□ -1.23
ITGB1-202ENST00000396033 FAM30AQ9NZY2 134 aa7.38□□□□□ -1.23
ITGB1-202ENST00000396033 ZNF861PO60384 105 aa7.38□□□□□ -1.23
ITGB1-202ENST00000396033 IGLV9-49A0A0B4J1Y8 123 aa7.37□□□□□ -1.23
ITGB1-202ENST00000396033 A8MU10 97 aa7.37□□□□□ -1.23
ITGB1-202ENST00000396033 CIRBP-AS1Q8TBR5 109 aa7.37□□□□□ -1.23
ITGB1-202ENST00000396033 LINC00483Q53H64 154 aa7.36□□□□□ -1.23
ITGB1-202ENST00000396033 PKD1P98161 4303 aa7.36□□□□□ -1.23
ITGB1-202ENST00000396033 KRTAP10-1P60331 282 aa7.34□□□□□ -1.23
ITGB1-202ENST00000396033 IGLV7-43P04211 117 aa7.34□□□□□ -1.23
ITGB1-202ENST00000396033 DSCR10P59022 87 aa7.34□□□□□ -1.24
ITGB1-202ENST00000396033 SACSQ9NZJ4 4579 aa7.33□□□□□ -1.24
ITGB1-202ENST00000396033 DEFB116Q30KQ4 102 aa7.33□□□□□ -1.24
ITGB1-202ENST00000396033 K7EQZ3 153 aa7.32□□□□□ -1.24
ITGB1-202ENST00000396033 Q6ZSA8 131 aa7.32□□□□□ -1.24
ITGB1-202ENST00000396033 ANAPC11Q9NYG5 84 aa7.32□□□□□ -1.24
ITGB1-202ENST00000396033 MOBPQ13875 183 aa7.3□□□□□ -1.24
ITGB1-202ENST00000396033 NDUFC1O43677 76 aa7.29□□□□□ -1.24
ITGB1-202ENST00000396033 RPL37AP61513 92 aaKnown RBP7.29□□□□□ -1.24
ITGB1-202ENST00000396033 C1orf195Q5TG92 126 aa7.29□□□□□ -1.24
ITGB1-202ENST00000396033 LCE6AA0A183 80 aa7.28□□□□□ -1.24
ITGB1-202ENST00000396033 hDV103S1A0JD37 113 aa7.28□□□□□ -1.24
ITGB1-202ENST00000396033 SEC61GP60059 68 aa7.27□□□□□ -1.25
ITGB1-202ENST00000396033 LINC00472Q9H8W2 130 aa7.25□□□□□ -1.25
ITGB1-202ENST00000396033 LRP1BQ9NZR2 4599 aa7.25□□□□□ -1.25
ITGB1-202ENST00000396033 ZCCHC13Q8WW36 166 aaKnown RBP7.25□□□□□ -1.25
ITGB1-202ENST00000396033 C1orf64Q8NEQ6 169 aa7.25□□□□□ -1.25
ITGB1-202ENST00000396033 HCG22E2RYF7 251 aa7.24□□□□□ -1.25
ITGB1-202ENST00000396033 ATP5EP56381 51 aaPredicted RBP7.24□□□□□ -1.25
ITGB1-202ENST00000396033 A8MWP4 228 aa7.22□□□□□ -1.25
ITGB1-202ENST00000396033 V9GYY9 64 aa7.21□□□□□ -1.25
ITGB1-202ENST00000396033 PRR15Q8IV56 129 aa7.21□□□□□ -1.26
ITGB1-202ENST00000396033 WFDC13Q8IUB5 93 aa7.2□□□□□ -1.26
ITGB1-202ENST00000396033 PKHD1P08F94 4074 aa7.2□□□□□ -1.26
ITGB1-202ENST00000396033 Q1T7F1 81 aa7.19□□□□□ -1.26
ITGB1-202ENST00000396033 Q96NJ1 140 aa7.19□□□□□ -1.26
ITGB1-202ENST00000396033 PSPHP1O15172 72 aa7.19□□□□□ -1.26
ITGB1-202ENST00000396033 PRR4Q16378 134 aa7.17□□□□□ -1.26
ITGB1-202ENST00000396033 VPS13BQ7Z7G8 4022 aa7.17□□□□□ -1.26
ITGB1-202ENST00000396033 TRAV22A0A0B4J277 110 aa7.17□□□□□ -1.26
ITGB1-202ENST00000396033 NDUFB1O75438 58 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms