RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 SRRM2Q9UQ35 2752 aaKnown RBP8.57□□□□□ -1.04
NFKB1-202ENST00000394820 H0Y9P7 68 aa8.57□□□□□ -1.04
NFKB1-202ENST00000394820 RETNLBQ9BQ08 111 aa8.56□□□□□ -1.04
NFKB1-202ENST00000394820 GVQW2A0A096LPI5 108 aaPredicted RBP8.55□□□□□ -1.04
NFKB1-202ENST00000394820 PHF5AQ7RTV0 110 aaKnown RBP8.55□□□□□ -1.04
NFKB1-202ENST00000394820 LINC00588Q9Y4M8 146 aa8.54□□□□□ -1.04
NFKB1-202ENST00000394820 LINC01556Q5JQF7 62 aa8.53□□□□□ -1.04
NFKB1-202ENST00000394820 OCR1Q9BZK8 76 aa8.53□□□□□ -1.04
NFKB1-202ENST00000394820 IGHV6-1A0A0B4J1U7 121 aa8.52□□□□□ -1.04
NFKB1-202ENST00000394820 COL7A1Q02388 2944 aa8.52□□□□□ -1.04
NFKB1-202ENST00000394820 EPM2AB3EWF7 344 aa8.52□□□□□ -1.05
NFKB1-202ENST00000394820 KCNQ1DNQ9H478 68 aa8.51□□□□□ -1.05
NFKB1-202ENST00000394820 BCE1O60756 84 aa8.5□□□□□ -1.05
NFKB1-202ENST00000394820 B9D2Q9BPU9 175 aa8.5□□□□□ -1.05
NFKB1-202ENST00000394820 IGLV1-50A0A075B6I6 118 aa8.49□□□□□ -1.05
NFKB1-202ENST00000394820 IGFL1Q6UW32 110 aa8.49□□□□□ -1.05
NFKB1-202ENST00000394820 WIPF1O43516 503 aa8.48□□□□□ -1.05
NFKB1-202ENST00000394820 SPAG11AQ6PDA7 123 aa8.48□□□□□ -1.05
NFKB1-202ENST00000394820 K7EIL1 84 aa8.48□□□□□ -1.05
NFKB1-202ENST00000394820 DSCR10P59022 87 aa8.47□□□□□ -1.05
NFKB1-202ENST00000394820 ANAPC11Q9NYG5 84 aa8.47□□□□□ -1.05
NFKB1-202ENST00000394820 H3BNG1 76 aa8.46□□□□□ -1.05
NFKB1-202ENST00000394820 KRTAP26-1Q6PEX3 210 aa8.46□□□□□ -1.06
NFKB1-202ENST00000394820 TRAV22A0A0B4J277 110 aa8.45□□□□□ -1.06
NFKB1-202ENST00000394820 SEC61GP60059 68 aa8.45□□□□□ -1.06
NFKB1-202ENST00000394820 DNAH10OSP0CZ25 163 aa8.42□□□□□ -1.06
NFKB1-202ENST00000394820 hDV103S1A0JD37 113 aa8.4□□□□□ -1.07
NFKB1-202ENST00000394820 IGLV5-48A0A075B6I7 105 aa8.39□□□□□ -1.07
NFKB1-202ENST00000394820 CIRBP-AS1Q8TBR5 109 aa8.39□□□□□ -1.07
NFKB1-202ENST00000394820 A8MU10 97 aa8.37□□□□□ -1.07
NFKB1-202ENST00000394820 DMBT1Q9UGM3 2413 aaPredicted RBP8.37□□□□□ -1.07
NFKB1-202ENST00000394820 ANK2Q01484 3957 aa8.37□□□□□ -1.07
NFKB1-202ENST00000394820 MOBPQ13875 183 aa8.35□□□□□ -1.07
NFKB1-202ENST00000394820 MDFIQ99750 246 aa8.33□□□□□ -1.08
NFKB1-202ENST00000394820 KRTAP1-5Q9BYS1 174 aa8.33□□□□□ -1.08
NFKB1-202ENST00000394820 PRR15Q8IV56 129 aa8.32□□□□□ -1.08
NFKB1-202ENST00000394820 COA5Q86WW8 74 aa8.3□□□□□ -1.08
NFKB1-202ENST00000394820 C16orf90A8MZG2 172 aa8.29□□□□□ -1.08
NFKB1-202ENST00000394820 SPINK1P00995 79 aa8.29□□□□□ -1.08
NFKB1-202ENST00000394820 IGLV8-61A0A075B6I0 122 aa8.28□□□□□ -1.08
NFKB1-202ENST00000394820 C14orf177Q52M58 125 aa8.28□□□□□ -1.08
NFKB1-202ENST00000394820 A8MWP4 228 aa8.26□□□□□ -1.09
NFKB1-202ENST00000394820 TGP01266 2768 aa8.26□□□□□ -1.09
NFKB1-202ENST00000394820 KRTAP7-1Q8IUC3 87 aa8.25□□□□□ -1.09
NFKB1-202ENST00000394820 SPRR4Q96PI1 79 aa8.25□□□□□ -1.09
NFKB1-202ENST00000394820 PRR26Q8N8Z3 221 aa8.23□□□□□ -1.09
NFKB1-202ENST00000394820 F8WDY8 70 aa8.23□□□□□ -1.09
NFKB1-202ENST00000394820 LIMD2Q9BT23 127 aa8.23□□□□□ -1.09
NFKB1-202ENST00000394820 CNBPP62633 177 aaKnown RBP8.22□□□□□ -1.09
NFKB1-202ENST00000394820 TLX1NBP0CAT3 122 aa8.21□□□□□ -1.09
NFKB1-202ENST00000394820 KRTAP11-1Q8IUC1 163 aa8.21□□□□□ -1.1
NFKB1-202ENST00000394820 LYSTQ99698 3801 aa8.2□□□□□ -1.1
NFKB1-202ENST00000394820 IGKV2D-30A0A075B6S6 120 aa8.19□□□□□ -1.1
NFKB1-202ENST00000394820 LY6G6CO95867 125 aa8.19□□□□□ -1.1
NFKB1-202ENST00000394820 IGKV2-30P06310 120 aa8.19□□□□□ -1.1
NFKB1-202ENST00000394820 A0A1B0GW54 56 aa8.18□□□□□ -1.1
NFKB1-202ENST00000394820 SPRR1AP35321 89 aa8.18□□□□□ -1.1
NFKB1-202ENST00000394820 TNP2Q05952 138 aa8.18□□□□□ -1.1
NFKB1-202ENST00000394820 KRTAP4-16G5E9R7 235 aaPredicted RBP8.18□□□□□ -1.1
NFKB1-202ENST00000394820 APLNQ9ULZ1 77 aa8.18□□□□□ -1.1
NFKB1-202ENST00000394820 FLG2Q5D862 2391 aaPredicted RBP8.17□□□□□ -1.1
NFKB1-202ENST00000394820 Q1T7F1 81 aa8.16□□□□□ -1.1
NFKB1-202ENST00000394820 PANO1I0J062 215 aa8.16□□□□□ -1.1
NFKB1-202ENST00000394820 Q8N9P0 234 aaPredicted RBP8.16□□□□□ -1.1
NFKB1-202ENST00000394820 Q5VV11 94 aa8.15□□□□□ -1.1
NFKB1-202ENST00000394820 C8orf17Q9NRJ1 99 aa8.15□□□□□ -1.11
NFKB1-202ENST00000394820 PLA2G2DQ9UNK4 145 aa8.15□□□□□ -1.11
NFKB1-202ENST00000394820 NBDYA0A0U1RRE5 68 aa8.14□□□□□ -1.11
NFKB1-202ENST00000394820 HUWE1Q7Z6Z7 4374 aaKnown RBP8.14□□□□□ -1.11
NFKB1-202ENST00000394820 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.13□□□□□ -1.11
NFKB1-202ENST00000394820 IGLV5-52A0A0A0MRZ9 124 aa8.12□□□□□ -1.11
NFKB1-202ENST00000394820 DNAH10Q8IVF4 4471 aa8.12□□□□□ -1.11
NFKB1-202ENST00000394820 SPACA4Q8TDM5 124 aa8.11□□□□□ -1.11
NFKB1-202ENST00000394820 LOC101927531A0A1B0GV80 90 aa8.11□□□□□ -1.11
NFKB1-202ENST00000394820 IGLV5-37A0A075B6J1 123 aa8.1□□□□□ -1.11
NFKB1-202ENST00000394820 CD164Q04900 197 aa8.1□□□□□ -1.11
NFKB1-202ENST00000394820 C9orf163Q8N9P6 203 aa8.1□□□□□ -1.11
NFKB1-202ENST00000394820 C4orf48Q5BLP8 95 aa8.09□□□□□ -1.11
NFKB1-202ENST00000394820 MRPL34Q9BQ48 92 aaKnown RBP8.09□□□□□ -1.11
NFKB1-202ENST00000394820 CMYA5Q8N3K9 4069 aa8.09□□□□□ -1.11
NFKB1-202ENST00000394820 NUPR2A6NF83 97 aa8.09□□□□□ -1.11
NFKB1-202ENST00000394820 ZCCHC13Q8WW36 166 aaKnown RBP8.08□□□□□ -1.12
NFKB1-202ENST00000394820 CYP4F30PQ9H0H9 118 aa8.08□□□□□ -1.12
NFKB1-202ENST00000394820 MMP24-AS1A0A0U1RRL7 71 aa8.08□□□□□ -1.12
NFKB1-202ENST00000394820 PSORS1C2Q9UIG4 136 aa8.08□□□□□ -1.12
NFKB1-202ENST00000394820 ZNF706Q9Y5V0 76 aaPredicted RBP8.07□□□□□ -1.12
NFKB1-202ENST00000394820 A0A087X002 238 aa8.07□□□□□ -1.12
NFKB1-202ENST00000394820 NOTCH2NLQ7Z3S9 236 aa8.07□□□□□ -1.12
NFKB1-202ENST00000394820 LINC00472Q9H8W2 130 aa8.07□□□□□ -1.12
NFKB1-202ENST00000394820 RTL8CO15255 209 aa8.06□□□□□ -1.12
NFKB1-202ENST00000394820 SPINK7P58062 85 aa8.06□□□□□ -1.12
NFKB1-202ENST00000394820 PRAC1Q96KF2 57 aa8.06□□□□□ -1.12
NFKB1-202ENST00000394820 A0A1B0GVX0 72 aa8.06□□□□□ -1.12
NFKB1-202ENST00000394820 TP53AIP1Q9HCN2 124 aa8.05□□□□□ -1.12
NFKB1-202ENST00000394820 A0A1B0GU69 56 aa8.05□□□□□ -1.12
NFKB1-202ENST00000394820 H3BPC8 53 aa8.04□□□□□ -1.12
NFKB1-202ENST00000394820 FBN3Q75N90 2809 aa8.04□□□□□ -1.12
NFKB1-202ENST00000394820 LCA10Q71F78 164 aa8.02□□□□□ -1.13
NFKB1-202ENST00000394820 ATP11AUNQ6ZP68 121 aa8.01□□□□□ -1.13
NFKB1-202ENST00000394820 KRTAP29-1A8MX34 341 aaPredicted RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 158 ms