RNA–Protein interactions for RNA: ENST00000394258.6

RCCD1-201, Transcript of RCC1 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCCD1, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-201ENST00000394258 CHTF8P0CG12 524 aa12.39□□□□□ -0.43
RCCD1-201ENST00000394258 DNAH7Q8WXX0 4024 aa12.38□□□□□ -0.43
RCCD1-201ENST00000394258 OCR1Q9BZK8 76 aa12.38□□□□□ -0.43
RCCD1-201ENST00000394258 FAM30AQ9NZY2 134 aa12.38□□□□□ -0.43
RCCD1-201ENST00000394258 C16orf90A8MZG2 172 aa12.37□□□□□ -0.43
RCCD1-201ENST00000394258 CNBPP62633 177 aaKnown RBP12.34□□□□□ -0.43
RCCD1-201ENST00000394258 SMIM29Q86T20 159 aa12.33□□□□□ -0.44
RCCD1-201ENST00000394258 Q8NBF4 154 aa12.33□□□□□ -0.44
RCCD1-201ENST00000394258 ATP5EP56381 51 aaPredicted RBP12.32□□□□□ -0.44
RCCD1-201ENST00000394258 C1orf195Q5TG92 126 aa12.32□□□□□ -0.44
RCCD1-201ENST00000394258 PHF5AQ7RTV0 110 aaKnown RBP12.31□□□□□ -0.44
RCCD1-201ENST00000394258 KRTAP11-1Q8IUC1 163 aa12.31□□□□□ -0.44
RCCD1-201ENST00000394258 LINC00476Q8WZB0 136 aa12.29□□□□□ -0.44
RCCD1-201ENST00000394258 V9GYY9 64 aa12.28□□□□□ -0.44
RCCD1-201ENST00000394258 SEC61GP60059 68 aa12.28□□□□□ -0.44
RCCD1-201ENST00000394258 PRR4Q16378 134 aa12.27□□□□□ -0.44
RCCD1-201ENST00000394258 B9D2Q9BPU9 175 aa12.27□□□□□ -0.44
RCCD1-201ENST00000394258 SPRR4Q96PI1 79 aa12.26□□□□□ -0.45
RCCD1-201ENST00000394258 DSCR10P59022 87 aa12.24□□□□□ -0.45
RCCD1-201ENST00000394258 DEFB116Q30KQ4 102 aa12.24□□□□□ -0.45
RCCD1-201ENST00000394258 PLECQ15149 4684 aaKnown RBP12.24□□□□□ -0.45
RCCD1-201ENST00000394258 C14orf177Q52M58 125 aa12.24□□□□□ -0.45
RCCD1-201ENST00000394258 IGFL1Q6UW32 110 aa12.23□□□□□ -0.45
RCCD1-201ENST00000394258 K7EQZ3 153 aa12.23□□□□□ -0.45
RCCD1-201ENST00000394258 NBDYA0A0U1RRE5 68 aa12.22□□□□□ -0.45
RCCD1-201ENST00000394258 PANO1I0J062 215 aa12.21□□□□□ -0.46
RCCD1-201ENST00000394258 C9orf163Q8N9P6 203 aa12.2□□□□□ -0.46
RCCD1-201ENST00000394258 A0A1B0GW54 56 aa12.2□□□□□ -0.46
RCCD1-201ENST00000394258 UBE2AP49459 152 aa12.19□□□□□ -0.46
RCCD1-201ENST00000394258 PSPHP1O15172 72 aa12.18□□□□□ -0.46
RCCD1-201ENST00000394258 C1orf64Q8NEQ6 169 aa12.18□□□□□ -0.46
RCCD1-201ENST00000394258 A0A087WSZ3 146 aa12.16□□□□□ -0.46
RCCD1-201ENST00000394258 hDV103S1A0JD37 113 aa12.16□□□□□ -0.46
RCCD1-201ENST00000394258 DYNC2H1Q8NCM8 4307 aaKnown RBP12.15□□□□□ -0.47
RCCD1-201ENST00000394258 NUPR2A6NF83 97 aa12.14□□□□□ -0.47
RCCD1-201ENST00000394258 Q6ZRN7 208 aaPredicted RBP12.14□□□□□ -0.47
RCCD1-201ENST00000394258 RPL37AP61513 92 aaKnown RBP12.1□□□□□ -0.47
RCCD1-201ENST00000394258 STARD9Q9P2P6 4700 aa12.1□□□□□ -0.47
RCCD1-201ENST00000394258 PRKDCP78527 4128 aaKnown RBP12.09□□□□□ -0.47
RCCD1-201ENST00000394258 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.09□□□□□ -0.47
RCCD1-201ENST00000394258 IGLV8-61A0A075B6I0 122 aa12.07□□□□□ -0.48
RCCD1-201ENST00000394258 WFDC13Q8IUB5 93 aa12.06□□□□□ -0.48
RCCD1-201ENST00000394258 HCG22E2RYF7 251 aa12.05□□□□□ -0.48
RCCD1-201ENST00000394258 H0Y9J4 135 aa12.04□□□□□ -0.48
RCCD1-201ENST00000394258 A8MU10 97 aa12.04□□□□□ -0.48
RCCD1-201ENST00000394258 ZCCHC13Q8WW36 166 aaKnown RBP12.03□□□□□ -0.48
RCCD1-201ENST00000394258 TRAV22A0A0B4J277 110 aa12.02□□□□□ -0.49
RCCD1-201ENST00000394258 TGP01266 2768 aa12.02□□□□□ -0.49
RCCD1-201ENST00000394258 LCE6AA0A183 80 aa12.02□□□□□ -0.49
RCCD1-201ENST00000394258 MEGF8Q7Z7M0 2845 aa12.01□□□□□ -0.49
RCCD1-201ENST00000394258 SPRR1BP22528 89 aa12□□□□□ -0.49
RCCD1-201ENST00000394258 A0A087WTM6 91 aa12□□□□□ -0.49
RCCD1-201ENST00000394258 Q1T7F1 81 aa12□□□□□ -0.49
RCCD1-201ENST00000394258 KMT2AQ03164 3969 aa12□□□□□ -0.49
RCCD1-201ENST00000394258 SPACA4Q8TDM5 124 aa11.99□□□□□ -0.49
RCCD1-201ENST00000394258 A8MUN3 132 aa11.99□□□□□ -0.49
RCCD1-201ENST00000394258 PMAIP1Q13794 54 aa11.98□□□□□ -0.49
RCCD1-201ENST00000394258 PRR15Q8IV56 129 aa11.98□□□□□ -0.49
RCCD1-201ENST00000394258 IGLV9-49A0A0B4J1Y8 123 aa11.96□□□□□ -0.49
RCCD1-201ENST00000394258 KRTAP13-1Q8IUC0 172 aa11.96□□□□□ -0.49
RCCD1-201ENST00000394258 VPS13DQ5THJ4 4388 aa11.96□□□□□ -0.49
RCCD1-201ENST00000394258 RTL8CO15255 209 aa11.93□□□□□ -0.5
RCCD1-201ENST00000394258 LINC00208Q96KT6 92 aa11.93□□□□□ -0.5
RCCD1-201ENST00000394258 HECTD4Q9Y4D8 3996 aa11.92□□□□□ -0.5
RCCD1-201ENST00000394258 LINC00472Q9H8W2 130 aa11.9□□□□□ -0.5
RCCD1-201ENST00000394258 KRTAP29-1A8MX34 341 aaPredicted RBP11.89□□□□□ -0.51
RCCD1-201ENST00000394258 ANAPC11Q9NYG5 84 aa11.89□□□□□ -0.51
RCCD1-201ENST00000394258 FRAS1Q86XX4 4008 aa11.88□□□□□ -0.51
RCCD1-201ENST00000394258 PSORS1C2Q9UIG4 136 aa11.87□□□□□ -0.51
RCCD1-201ENST00000394258 CASC2Q6XLA1 102 aa11.86□□□□□ -0.51
RCCD1-201ENST00000394258 DNAH2Q9P225 4427 aa11.86□□□□□ -0.51
RCCD1-201ENST00000394258 CYP4F30PQ9H0H9 118 aa11.86□□□□□ -0.51
RCCD1-201ENST00000394258 Q6ZR54 194 aa11.85□□□□□ -0.51
RCCD1-201ENST00000394258 DNHD1Q96M86 4753 aa11.85□□□□□ -0.51
RCCD1-201ENST00000394258 A8MWP4 228 aa11.84□□□□□ -0.51
RCCD1-201ENST00000394258 MP68P56378 58 aa11.83□□□□□ -0.51
RCCD1-201ENST00000394258 FBN3Q75N90 2809 aa11.83□□□□□ -0.52
RCCD1-201ENST00000394258 IGLV5-52A0A0A0MRZ9 124 aa11.82□□□□□ -0.52
RCCD1-201ENST00000394258 Q5VV11 94 aa11.82□□□□□ -0.52
RCCD1-201ENST00000394258 LY6G6CO95867 125 aa11.8□□□□□ -0.52
RCCD1-201ENST00000394258 DNAH8Q96JB1 4490 aa11.8□□□□□ -0.52
RCCD1-201ENST00000394258 CHKB-CPT1BH3BT56 60 aa11.79□□□□□ -0.52
RCCD1-201ENST00000394258 C1orf134Q5TEV5 83 aa11.79□□□□□ -0.52
RCCD1-201ENST00000394258 MOBPQ13875 183 aa11.79□□□□□ -0.52
RCCD1-201ENST00000394258 NDUFB1O75438 58 aa11.78□□□□□ -0.52
RCCD1-201ENST00000394258 H0Y9P7 68 aa11.77□□□□□ -0.52
RCCD1-201ENST00000394258 PLAC8Q9NZF1 115 aa11.77□□□□□ -0.53
RCCD1-201ENST00000394258 LINC00483Q53H64 154 aa11.75□□□□□ -0.53
RCCD1-201ENST00000394258 SPTSSBQ8NFR3 76 aa11.75□□□□□ -0.53
RCCD1-201ENST00000394258 WWC2-AS2Q96NR7 200 aa11.75□□□□□ -0.53
RCCD1-201ENST00000394258 PRR15LQ9BU68 103 aa11.75□□□□□ -0.53
RCCD1-201ENST00000394258 MMP24-AS1A0A0U1RRL7 71 aa11.75□□□□□ -0.53
RCCD1-201ENST00000394258 Q96NJ1 140 aa11.75□□□□□ -0.53
RCCD1-201ENST00000394258 DNAH17Q9UFH2 4485 aa11.74□□□□□ -0.53
RCCD1-201ENST00000394258 ZNF861PO60384 105 aa11.74□□□□□ -0.53
RCCD1-201ENST00000394258 Q8N9P0 234 aaPredicted RBP11.74□□□□□ -0.53
RCCD1-201ENST00000394258 ZNF706Q9Y5V0 76 aaPredicted RBP11.72□□□□□ -0.53
RCCD1-201ENST00000394258 CD164Q04900 197 aa11.69□□□□□ -0.54
RCCD1-201ENST00000394258 DNAH6Q9C0G6 4158 aa11.68□□□□□ -0.54
RCCD1-201ENST00000394258 IGHV6-1A0A0B4J1U7 121 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 143.9 ms