RNA–Protein interactions for RNA: ENST00000391993.7

TRAF3IP1-202, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-202ENST00000391993 INAFM1C9JVW0 142 aa11□□□□□ -0.65
TRAF3IP1-202ENST00000391993 Q8N9P0 234 aaPredicted RBP10.99□□□□□ -0.65
TRAF3IP1-202ENST00000391993 MDFIQ99750 246 aa10.99□□□□□ -0.65
TRAF3IP1-202ENST00000391993 ITPR2Q14571 2701 aa10.99□□□□□ -0.65
TRAF3IP1-202ENST00000391993 IGLV5-48A0A075B6I7 105 aa10.98□□□□□ -0.65
TRAF3IP1-202ENST00000391993 PRAC1Q96KF2 57 aa10.98□□□□□ -0.65
TRAF3IP1-202ENST00000391993 IGLV8-61A0A075B6I0 122 aa10.96□□□□□ -0.65
TRAF3IP1-202ENST00000391993 ZFHX3Q15911 3703 aa10.96□□□□□ -0.65
TRAF3IP1-202ENST00000391993 PDZD2O15018 2839 aa10.96□□□□□ -0.66
TRAF3IP1-202ENST00000391993 CASC10Q5T4H9 136 aa10.94□□□□□ -0.66
TRAF3IP1-202ENST00000391993 IGLV1-50A0A075B6I6 118 aa10.93□□□□□ -0.66
TRAF3IP1-202ENST00000391993 C7orf65Q6ZTY9 151 aa10.93□□□□□ -0.66
TRAF3IP1-202ENST00000391993 CYP4F30PQ9H0H9 118 aa10.93□□□□□ -0.66
TRAF3IP1-202ENST00000391993 CHTF8P0CG12 524 aa10.92□□□□□ -0.66
TRAF3IP1-202ENST00000391993 LINC00588Q9Y4M8 146 aa10.91□□□□□ -0.66
TRAF3IP1-202ENST00000391993 PRR26Q8N8Z3 221 aa10.91□□□□□ -0.66
TRAF3IP1-202ENST00000391993 DMBT1Q9UGM3 2413 aaPredicted RBP10.89□□□□□ -0.67
TRAF3IP1-202ENST00000391993 SPINK1P00995 79 aa10.89□□□□□ -0.67
TRAF3IP1-202ENST00000391993 PHF5AQ7RTV0 110 aaKnown RBP10.89□□□□□ -0.67
TRAF3IP1-202ENST00000391993 A0A1B0GW54 56 aa10.88□□□□□ -0.67
TRAF3IP1-202ENST00000391993 A8MWP4 228 aa10.85□□□□□ -0.67
TRAF3IP1-202ENST00000391993 LCA10Q71F78 164 aa10.85□□□□□ -0.67
TRAF3IP1-202ENST00000391993 LINC01556Q5JQF7 62 aa10.85□□□□□ -0.67
TRAF3IP1-202ENST00000391993 CDC42SE1Q9NRR8 79 aa10.84□□□□□ -0.67
TRAF3IP1-202ENST00000391993 SPINK7P58062 85 aa10.83□□□□□ -0.68
TRAF3IP1-202ENST00000391993 C4orf48Q5BLP8 95 aa10.82□□□□□ -0.68
TRAF3IP1-202ENST00000391993 A0A1B0GU69 56 aa10.81□□□□□ -0.68
TRAF3IP1-202ENST00000391993 H3BPC8 53 aa10.81□□□□□ -0.68
TRAF3IP1-202ENST00000391993 KRTAP10-3P60369 221 aa10.81□□□□□ -0.68
TRAF3IP1-202ENST00000391993 SPRR4Q96PI1 79 aa10.81□□□□□ -0.68
TRAF3IP1-202ENST00000391993 VPS13CQ709C8 3753 aa10.8□□□□□ -0.68
TRAF3IP1-202ENST00000391993 FLG2Q5D862 2391 aaPredicted RBP10.8□□□□□ -0.68
TRAF3IP1-202ENST00000391993 VWFP04275 2813 aa10.78□□□□□ -0.68
TRAF3IP1-202ENST00000391993 STAB2Q8WWQ8 2551 aa10.78□□□□□ -0.68
TRAF3IP1-202ENST00000391993 ZCCHC13Q8WW36 166 aaKnown RBP10.78□□□□□ -0.68
TRAF3IP1-202ENST00000391993 MOBPQ13875 183 aa10.76□□□□□ -0.69
TRAF3IP1-202ENST00000391993 CIRBP-AS1Q8TBR5 109 aa10.76□□□□□ -0.69
TRAF3IP1-202ENST00000391993 H3BS24 57 aa10.76□□□□□ -0.69
TRAF3IP1-202ENST00000391993 SPANXA2-OT1Q8N9U9 137 aa10.76□□□□□ -0.69
TRAF3IP1-202ENST00000391993 CNBPP62633 177 aaKnown RBP10.75□□□□□ -0.69
TRAF3IP1-202ENST00000391993 Q75L30 129 aa10.74□□□□□ -0.69
TRAF3IP1-202ENST00000391993 C8orf87E5RJ46 101 aa10.74□□□□□ -0.69
TRAF3IP1-202ENST00000391993 PKD1L1Q8TDX9 2849 aa10.74□□□□□ -0.69
TRAF3IP1-202ENST00000391993 J3QKU1 62 aa10.74□□□□□ -0.69
TRAF3IP1-202ENST00000391993 ANAPC11Q9NYG5 84 aa10.73□□□□□ -0.69
TRAF3IP1-202ENST00000391993 LINC00313P59037 77 aa10.72□□□□□ -0.69
TRAF3IP1-202ENST00000391993 TP53AIP1Q9HCN2 124 aa10.7□□□□□ -0.7
TRAF3IP1-202ENST00000391993 IGKV2D-30A0A075B6S6 120 aa10.69□□□□□ -0.7
TRAF3IP1-202ENST00000391993 IGKV2-30P06310 120 aa10.69□□□□□ -0.7
TRAF3IP1-202ENST00000391993 ACYP2P14621 99 aa10.67□□□□□ -0.7
TRAF3IP1-202ENST00000391993 C8orf17Q9NRJ1 99 aa10.67□□□□□ -0.7
TRAF3IP1-202ENST00000391993 IGLV7-46A0A075B6I9 117 aa10.66□□□□□ -0.7
TRAF3IP1-202ENST00000391993 ADM2Q7Z4H4 148 aa10.65□□□□□ -0.71
TRAF3IP1-202ENST00000391993 TNP2Q05952 138 aa10.64□□□□□ -0.71
TRAF3IP1-202ENST00000391993 MRPL34Q9BQ48 92 aaKnown RBP10.62□□□□□ -0.71
TRAF3IP1-202ENST00000391993 KRTAP1-3Q8IUG1 177 aa10.62□□□□□ -0.71
TRAF3IP1-202ENST00000391993 TENM3Q9P273 2699 aa10.62□□□□□ -0.71
TRAF3IP1-202ENST00000391993 HRES1P13985 223 aa10.62□□□□□ -0.71
TRAF3IP1-202ENST00000391993 DNAH10OSP0CZ25 163 aa10.6□□□□□ -0.71
TRAF3IP1-202ENST00000391993 C14orf177Q52M58 125 aa10.6□□□□□ -0.71
TRAF3IP1-202ENST00000391993 KRTAP26-1Q6PEX3 210 aa10.59□□□□□ -0.71
TRAF3IP1-202ENST00000391993 C9orf163Q8N9P6 203 aa10.59□□□□□ -0.71
TRAF3IP1-202ENST00000391993 SRRM2Q9UQ35 2752 aaKnown RBP10.59□□□□□ -0.71
TRAF3IP1-202ENST00000391993 LINC01554Q52M75 96 aa10.58□□□□□ -0.72
TRAF3IP1-202ENST00000391993 LINC01558Q9Y6Z2 57 aa10.58□□□□□ -0.72
TRAF3IP1-202ENST00000391993 MMP24-AS1A0A0U1RRL7 71 aa10.57□□□□□ -0.72
TRAF3IP1-202ENST00000391993 MIR22HGQ0VDD5 57 aa10.57□□□□□ -0.72
TRAF3IP1-202ENST00000391993 K7EIL1 84 aa10.57□□□□□ -0.72
TRAF3IP1-202ENST00000391993 A6NN06 94 aa10.57□□□□□ -0.72
TRAF3IP1-202ENST00000391993 H3BNG1 76 aa10.57□□□□□ -0.72
TRAF3IP1-202ENST00000391993 LCE6AA0A183 80 aa10.56□□□□□ -0.72
TRAF3IP1-202ENST00000391993 TENM1Q9UKZ4 2725 aa10.56□□□□□ -0.72
TRAF3IP1-202ENST00000391993 TLX1NBP0CAT3 122 aa10.55□□□□□ -0.72
TRAF3IP1-202ENST00000391993 SPRR1AP35321 89 aa10.55□□□□□ -0.72
TRAF3IP1-202ENST00000391993 FBN1P35555 2871 aaKnown RBP10.54□□□□□ -0.72
TRAF3IP1-202ENST00000391993 UQCR11O14957 56 aa10.53□□□□□ -0.72
TRAF3IP1-202ENST00000391993 A0A1B0GVX0 72 aa10.53□□□□□ -0.72
TRAF3IP1-202ENST00000391993 KRTAP29-1A8MX34 341 aaPredicted RBP10.52□□□□□ -0.72
TRAF3IP1-202ENST00000391993 PLA2G2DQ9UNK4 145 aa10.52□□□□□ -0.72
TRAF3IP1-202ENST00000391993 KRTAP4-16G5E9R7 235 aaPredicted RBP10.51□□□□□ -0.73
TRAF3IP1-202ENST00000391993 RTL8CO15255 209 aa10.51□□□□□ -0.73
TRAF3IP1-202ENST00000391993 LINC00472Q9H8W2 130 aa10.5□□□□□ -0.73
TRAF3IP1-202ENST00000391993 CSAG1Q6PB30 78 aa10.49□□□□□ -0.73
TRAF3IP1-202ENST00000391993 KRTAP10-11P60412 298 aa10.49□□□□□ -0.73
TRAF3IP1-202ENST00000391993 ZNF706Q9Y5V0 76 aaPredicted RBP10.47□□□□□ -0.73
TRAF3IP1-202ENST00000391993 KRTAP1-1Q07627 177 aa10.47□□□□□ -0.73
TRAF3IP1-202ENST00000391993 KMT2BQ9UMN6 2715 aaPredicted RBP10.46□□□□□ -0.74
TRAF3IP1-202ENST00000391993 KRTAP7-1Q8IUC3 87 aa10.44□□□□□ -0.74
TRAF3IP1-202ENST00000391993 IGLV5-37A0A075B6J1 123 aa10.44□□□□□ -0.74
TRAF3IP1-202ENST00000391993 CRIPTQ9P021 101 aa10.4□□□□□ -0.74
TRAF3IP1-202ENST00000391993 SPACA4Q8TDM5 124 aa10.38□□□□□ -0.75
TRAF3IP1-202ENST00000391993 A0A087X002 238 aa10.38□□□□□ -0.75
TRAF3IP1-202ENST00000391993 NOTCH2NLQ7Z3S9 236 aa10.38□□□□□ -0.75
TRAF3IP1-202ENST00000391993 K7ERS5 55 aa10.38□□□□□ -0.75
TRAF3IP1-202ENST00000391993 TENM4Q6N022 2769 aa10.37□□□□□ -0.75
TRAF3IP1-202ENST00000391993 NBPF19A0A087WUL8 3843 aa10.35□□□□□ -0.75
TRAF3IP1-202ENST00000391993 SSBP3-AS1Q7Z2R9 100 aa10.35□□□□□ -0.75
TRAF3IP1-202ENST00000391993 KRTAP11-1Q8IUC1 163 aa10.34□□□□□ -0.75
TRAF3IP1-202ENST00000391993 OTOGQ6ZRI0 2925 aa10.34□□□□□ -0.75
TRAF3IP1-202ENST00000391993 TENM2Q9NT68 2774 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 118.4 ms