RNA–Protein interactions for RNA: ENST00000390533.1

TRAJ4-201, Transcript of T cell receptor alpha joining 4, humanhuman

APPRIS P1 BASIC

Gene TRAJ4, Length 63 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ4-201ENST00000390533 C4orf48Q5BLP8 95 aa3.06□□□□□ -1.92
TRAJ4-201ENST00000390533 SPAG11AQ6PDA7 123 aa3.06□□□□□ -1.92
TRAJ4-201ENST00000390533 C8orf17Q9NRJ1 99 aa3.06□□□□□ -1.92
TRAJ4-201ENST00000390533 CELSR1Q9NYQ6 3014 aa3.06□□□□□ -1.92
TRAJ4-201ENST00000390533 ITPR3Q14573 2671 aa3.06□□□□□ -1.92
TRAJ4-201ENST00000390533 GCN1Q92616 2671 aaKnown RBP3.06□□□□□ -1.92
TRAJ4-201ENST00000390533 A0A0G2JQZ4 141 aa3.05□□□□□ -1.92
TRAJ4-201ENST00000390533 A0A1W2PNN7 141 aa3.05□□□□□ -1.92
TRAJ4-201ENST00000390533 LINC00313P59037 77 aa3.04□□□□□ -1.92
TRAJ4-201ENST00000390533 PCOTHQ58A44 107 aa3.04□□□□□ -1.92
TRAJ4-201ENST00000390533 Q96NJ1 140 aa3.04□□□□□ -1.92
TRAJ4-201ENST00000390533 UNC79Q9P2D8 2635 aa3.03□□□□□ -1.92
TRAJ4-201ENST00000390533 A0A1B0GVX0 72 aa3.03□□□□□ -1.92
TRAJ4-201ENST00000390533 ACYP2P14621 99 aa3.03□□□□□ -1.92
TRAJ4-201ENST00000390533 PRLHP81277 87 aa3.03□□□□□ -1.92
TRAJ4-201ENST00000390533 LINC01554Q52M75 96 aa3.03□□□□□ -1.92
TRAJ4-201ENST00000390533 SPATA8Q6RVD6 105 aa3.03□□□□□ -1.92
TRAJ4-201ENST00000390533 C11orf45Q8TAV5 145 aa3.03□□□□□ -1.92
TRAJ4-201ENST00000390533 MRPL34Q9BQ48 92 aaKnown RBP3.03□□□□□ -1.92
TRAJ4-201ENST00000390533 FLNAP21333 2647 aaKnown RBP3.03□□□□□ -1.93
TRAJ4-201ENST00000390533 PIEZO1Q92508 2521 aa3.02□□□□□ -1.93
TRAJ4-201ENST00000390533 COL12A1Q99715 3063 aa3.02□□□□□ -1.93
TRAJ4-201ENST00000390533 RTL8CO15255 209 aa3.02□□□□□ -1.93
TRAJ4-201ENST00000390533 C14orf177Q52M58 125 aa3.02□□□□□ -1.93
TRAJ4-201ENST00000390533 CASC10Q5T4H9 136 aa3.02□□□□□ -1.93
TRAJ4-201ENST00000390533 PRR26Q8N8Z3 221 aa3.02□□□□□ -1.93
TRAJ4-201ENST00000390533 A0A096LNI7 61 aa3.01□□□□□ -1.93
TRAJ4-201ENST00000390533 KRTAP13-3Q3SY46 172 aa3.01□□□□□ -1.93
TRAJ4-201ENST00000390533 LINC00483Q53H64 154 aa3.01□□□□□ -1.93
TRAJ4-201ENST00000390533 KRTAP13-1Q8IUC0 172 aa3.01□□□□□ -1.93
TRAJ4-201ENST00000390533 MDFIQ99750 246 aa3.01□□□□□ -1.93
TRAJ4-201ENST00000390533 FBN2P35556 2912 aa3.01□□□□□ -1.93
TRAJ4-201ENST00000390533 NBEAL2Q6ZNJ1 2754 aa3□□□□□ -1.93
TRAJ4-201ENST00000390533 ZNF462Q96JM2 2506 aa3□□□□□ -1.93
TRAJ4-201ENST00000390533 CFAP46Q8IYW2 2715 aa3□□□□□ -1.93
TRAJ4-201ENST00000390533 CDK2AP2O75956 126 aa3□□□□□ -1.93
TRAJ4-201ENST00000390533 DMAC1Q96GE9 116 aa3□□□□□ -1.93
TRAJ4-201ENST00000390533 VPS13CQ709C8 3753 aa3□□□□□ -1.93
TRAJ4-201ENST00000390533 FLNCQ14315 2725 aa3□□□□□ -1.93
TRAJ4-201ENST00000390533 ANK3Q12955 4377 aaKnown RBP2.99□□□□□ -1.93
TRAJ4-201ENST00000390533 UTP20O75691 2785 aaKnown RBP2.99□□□□□ -1.93
TRAJ4-201ENST00000390533 CELSR2Q9HCU4 2923 aa2.99□□□□□ -1.93
TRAJ4-201ENST00000390533 KMT2BQ9UMN6 2715 aaPredicted RBP2.98□□□□□ -1.93
TRAJ4-201ENST00000390533 NBPF19A0A087WUL8 3843 aa2.98□□□□□ -1.93
TRAJ4-201ENST00000390533 ZNF706Q9Y5V0 76 aaPredicted RBP2.98□□□□□ -1.93
TRAJ4-201ENST00000390533 ALMS1Q8TCU4 4167 aa2.97□□□□□ -1.93
TRAJ4-201ENST00000390533 IGHV6-1A0A0B4J1U7 121 aa2.97□□□□□ -1.93
TRAJ4-201ENST00000390533 A0A1B0GU69 56 aa2.97□□□□□ -1.93
TRAJ4-201ENST00000390533 UQCR11O14957 56 aa2.97□□□□□ -1.93
TRAJ4-201ENST00000390533 PRAC1Q96KF2 57 aa2.97□□□□□ -1.93
TRAJ4-201ENST00000390533 RETNLBQ9BQ08 111 aa2.97□□□□□ -1.93
TRAJ4-201ENST00000390533 CRYBG3Q68DQ2 2970 aa2.96□□□□□ -1.94
TRAJ4-201ENST00000390533 NF1P21359 2839 aa2.96□□□□□ -1.94
TRAJ4-201ENST00000390533 CHTF8P0CG12 524 aa2.96□□□□□ -1.94
TRAJ4-201ENST00000390533 MIR22HGQ0VDD5 57 aa2.96□□□□□ -1.94
TRAJ4-201ENST00000390533 KRTAP11-1Q8IUC1 163 aa2.96□□□□□ -1.94
TRAJ4-201ENST00000390533 IGSF10Q6WRI0 2623 aa2.96□□□□□ -1.94
TRAJ4-201ENST00000390533 KRTAP10-11P60412 298 aa2.95□□□□□ -1.94
TRAJ4-201ENST00000390533 FAM229AH3BQW9 127 aa2.94□□□□□ -1.94
TRAJ4-201ENST00000390533 Q5W150 140 aa2.94□□□□□ -1.94
TRAJ4-201ENST00000390533 WWC2-AS2Q96NR7 200 aa2.94□□□□□ -1.94
TRAJ4-201ENST00000390533 H3BS24 57 aa2.93□□□□□ -1.94
TRAJ4-201ENST00000390533 IGKV2-30P06310 120 aa2.93□□□□□ -1.94
TRAJ4-201ENST00000390533 NOTCH2NLQ7Z3S9 236 aa2.93□□□□□ -1.94
TRAJ4-201ENST00000390533 ADM2Q7Z4H4 148 aa2.93□□□□□ -1.94
TRAJ4-201ENST00000390533 HIVEP1P15822 2718 aa2.92□□□□□ -1.94
TRAJ4-201ENST00000390533 CENPEQ02224 2701 aa2.92□□□□□ -1.94
TRAJ4-201ENST00000390533 IGLV9-49A0A0B4J1Y8 123 aa2.91□□□□□ -1.94
TRAJ4-201ENST00000390533 K7EIL1 84 aa2.91□□□□□ -1.94
TRAJ4-201ENST00000390533 OXLD1Q5BKU9 147 aa2.91□□□□□ -1.94
TRAJ4-201ENST00000390533 DNAH1Q9P2D7 4330 aa2.91□□□□□ -1.94
TRAJ4-201ENST00000390533 ZNF861PO60384 105 aa2.9□□□□□ -1.95
TRAJ4-201ENST00000390533 IGLV7-43P04211 117 aa2.9□□□□□ -1.95
TRAJ4-201ENST00000390533 SSBP3-AS1Q7Z2R9 100 aa2.9□□□□□ -1.95
TRAJ4-201ENST00000390533 SPACA4Q8TDM5 124 aa2.9□□□□□ -1.95
TRAJ4-201ENST00000390533 SMR3AQ99954 134 aa2.9□□□□□ -1.95
TRAJ4-201ENST00000390533 KRTAP1-5Q9BYS1 174 aa2.9□□□□□ -1.95
TRAJ4-201ENST00000390533 UBR5O95071 2799 aaPredicted RBP2.89□□□□□ -1.95
TRAJ4-201ENST00000390533 NIPBLQ6KC79 2804 aaeCLIP2.89□□□□□ -1.95
TRAJ4-201ENST00000390533 ATRQ13535 2644 aa2.89□□□□□ -1.95
TRAJ4-201ENST00000390533 CSAG1Q6PB30 78 aa2.89□□□□□ -1.95
TRAJ4-201ENST00000390533 USP24Q9UPU5 2620 aa2.89□□□□□ -1.95
TRAJ4-201ENST00000390533 ZNF469Q96JG9 3925 aaPredicted RBP2.89□□□□□ -1.95
TRAJ4-201ENST00000390533 CSMD2Q7Z408 3487 aa2.88□□□□□ -1.95
TRAJ4-201ENST00000390533 IGLV5-52A0A0A0MRZ9 124 aa2.88□□□□□ -1.95
TRAJ4-201ENST00000390533 INAFM1C9JVW0 142 aa2.88□□□□□ -1.95
TRAJ4-201ENST00000390533 TENM3Q9P273 2699 aa2.88□□□□□ -1.95
TRAJ4-201ENST00000390533 IGKV2D-30A0A075B6S6 120 aa2.87□□□□□ -1.95
TRAJ4-201ENST00000390533 TEP1Q99973 2627 aaKnown RBP2.87□□□□□ -1.95
TRAJ4-201ENST00000390533 LY6G6CO95867 125 aa2.86□□□□□ -1.95
TRAJ4-201ENST00000390533 Q6ZRN7 208 aaPredicted RBP2.86□□□□□ -1.95
TRAJ4-201ENST00000390533 APLNQ9ULZ1 77 aa2.86□□□□□ -1.95
TRAJ4-201ENST00000390533 FASNP49327 2511 aaKnown RBP2.86□□□□□ -1.95
TRAJ4-201ENST00000390533 TENM2Q9NT68 2774 aa2.85□□□□□ -1.95
TRAJ4-201ENST00000390533 HELZ2Q9BYK8 2649 aaKnown RBP2.85□□□□□ -1.95
TRAJ4-201ENST00000390533 PANO1I0J062 215 aa2.85□□□□□ -1.95
TRAJ4-201ENST00000390533 KRTAP25-1Q3LHN0 102 aa2.85□□□□□ -1.95
TRAJ4-201ENST00000390533 UBE2DNLQ8IWF7 75 aa2.85□□□□□ -1.95
TRAJ4-201ENST00000390533 PSORS1C2Q9UIG4 136 aa2.85□□□□□ -1.95
TRAJ4-201ENST00000390533 PDZD2O15018 2839 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms