RNA–Protein interactions for RNA: ENST00000389757.7

PKP4-201, Transcript of plakophilin 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKP4, Length 5,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-201ENST00000389757 KRTAP26-1Q6PEX3 210 aa6.33□□□□□ -1.4
PKP4-201ENST00000389757 NBEAL1Q6ZS30 2694 aa6.33□□□□□ -1.4
PKP4-201ENST00000389757 KRTAP10-1P60331 282 aa6.33□□□□□ -1.4
PKP4-201ENST00000389757 KLKP1Q107X0 134 aa6.32□□□□□ -1.4
PKP4-201ENST00000389757 Q8NDZ9 215 aa6.32□□□□□ -1.4
PKP4-201ENST00000389757 KRTAP10-2P60368 255 aa6.32□□□□□ -1.4
PKP4-201ENST00000389757 CDH23Q9H251 3354 aa6.3□□□□□ -1.4
PKP4-201ENST00000389757 FLNCQ14315 2725 aa6.3□□□□□ -1.4
PKP4-201ENST00000389757 Q8N1X5 172 aa6.3□□□□□ -1.4
PKP4-201ENST00000389757 ITPR2Q14571 2701 aa6.29□□□□□ -1.4
PKP4-201ENST00000389757 VPS13AQ96RL7 3174 aa6.28□□□□□ -1.4
PKP4-201ENST00000389757 Q6ZR54 194 aa6.28□□□□□ -1.4
PKP4-201ENST00000389757 UQCR11O14957 56 aa6.28□□□□□ -1.4
PKP4-201ENST00000389757 SPRR1BP22528 89 aa6.28□□□□□ -1.4
PKP4-201ENST00000389757 KRTAP21-3Q3LHN1 58 aa6.26□□□□□ -1.41
PKP4-201ENST00000389757 ITPR1Q14643 2758 aa6.26□□□□□ -1.41
PKP4-201ENST00000389757 A8MUN3 132 aa6.24□□□□□ -1.41
PKP4-201ENST00000389757 C4orf26Q17RF5 130 aa6.24□□□□□ -1.41
PKP4-201ENST00000389757 CYP4F30PQ9H0H9 118 aa6.24□□□□□ -1.41
PKP4-201ENST00000389757 NSD1Q96L73 2696 aaPredicted RBP6.23□□□□□ -1.41
PKP4-201ENST00000389757 SPANXA2-OT1Q8N9U9 137 aa6.23□□□□□ -1.41
PKP4-201ENST00000389757 PRO0628Q9UI54 55 aa6.23□□□□□ -1.41
PKP4-201ENST00000389757 H7BZZ5 65 aa6.22□□□□□ -1.41
PKP4-201ENST00000389757 M0R2T5 61 aa6.22□□□□□ -1.41
PKP4-201ENST00000389757 NBEAL2Q6ZNJ1 2754 aa6.22□□□□□ -1.41
PKP4-201ENST00000389757 SZT2Q5T011 3432 aa6.21□□□□□ -1.42
PKP4-201ENST00000389757 FRYQ5TBA9 3013 aa6.21□□□□□ -1.42
PKP4-201ENST00000389757 LINC01554Q52M75 96 aa6.2□□□□□ -1.42
PKP4-201ENST00000389757 ZCCHC13Q8WW36 166 aaKnown RBP6.2□□□□□ -1.42
PKP4-201ENST00000389757 MIR22HGQ0VDD5 57 aa6.2□□□□□ -1.42
PKP4-201ENST00000389757 OCR1Q9BZK8 76 aa6.2□□□□□ -1.42
PKP4-201ENST00000389757 HIVEP1P15822 2718 aa6.19□□□□□ -1.42
PKP4-201ENST00000389757 ATMQ13315 3056 aa6.19□□□□□ -1.42
PKP4-201ENST00000389757 MMP24-AS1A0A0U1RRL7 71 aa6.19□□□□□ -1.42
PKP4-201ENST00000389757 FRYLO94915 3013 aa6.19□□□□□ -1.42
PKP4-201ENST00000389757 PANO1I0J062 215 aa6.18□□□□□ -1.42
PKP4-201ENST00000389757 SEC61BP60468 96 aaKnown RBP6.18□□□□□ -1.42
PKP4-201ENST00000389757 COL12A1Q99715 3063 aa6.17□□□□□ -1.42
PKP4-201ENST00000389757 LINC00472Q9H8W2 130 aa6.16□□□□□ -1.42
PKP4-201ENST00000389757 TACC2O95359 2948 aa6.16□□□□□ -1.42
PKP4-201ENST00000389757 TNRC18O15417 2968 aaPredicted RBP6.16□□□□□ -1.42
PKP4-201ENST00000389757 HRES1P13985 223 aa6.15□□□□□ -1.42
PKP4-201ENST00000389757 LINC00483Q53H64 154 aa6.15□□□□□ -1.43
PKP4-201ENST00000389757 A0A0D9SG42 100 aa6.13□□□□□ -1.43
PKP4-201ENST00000389757 SPINT4Q6UDR6 99 aa6.13□□□□□ -1.43
PKP4-201ENST00000389757 STAB2Q8WWQ8 2551 aa6.13□□□□□ -1.43
PKP4-201ENST00000389757 Q6ZRN7 208 aaPredicted RBP6.12□□□□□ -1.43
PKP4-201ENST00000389757 DMXL2Q8TDJ6 3036 aa6.12□□□□□ -1.43
PKP4-201ENST00000389757 UTP20O75691 2785 aaKnown RBP6.12□□□□□ -1.43
PKP4-201ENST00000389757 CRIPTQ9P021 101 aa6.12□□□□□ -1.43
PKP4-201ENST00000389757 KMT2BQ9UMN6 2715 aaPredicted RBP6.11□□□□□ -1.43
PKP4-201ENST00000389757 CSAG1Q6PB30 78 aa6.1□□□□□ -1.43
PKP4-201ENST00000389757 FP248Q71RG6 208 aaPredicted RBP6.1□□□□□ -1.43
PKP4-201ENST00000389757 SPINK7P58062 85 aa6.1□□□□□ -1.43
PKP4-201ENST00000389757 KRTAP4-16G5E9R7 235 aaPredicted RBP6.1□□□□□ -1.43
PKP4-201ENST00000389757 Q8N9P0 234 aaPredicted RBP6.1□□□□□ -1.43
PKP4-201ENST00000389757 OXTP01178 125 aa6.09□□□□□ -1.43
PKP4-201ENST00000389757 LAMA1P25391 3075 aa6.09□□□□□ -1.43
PKP4-201ENST00000389757 COL6A3P12111 3177 aa6.09□□□□□ -1.44
PKP4-201ENST00000389757 Q5W150 140 aa6.08□□□□□ -1.44
PKP4-201ENST00000389757 REV3LO60673 3130 aa6.08□□□□□ -1.44
PKP4-201ENST00000389757 APCP25054 2843 aa6.08□□□□□ -1.44
PKP4-201ENST00000389757 TENM4Q6N022 2769 aa6.07□□□□□ -1.44
PKP4-201ENST00000389757 S4R3F8 94 aa6.07□□□□□ -1.44
PKP4-201ENST00000389757 CELSR3Q9NYQ7 3312 aa6.06□□□□□ -1.44
PKP4-201ENST00000389757 A0A087X002 238 aa6.06□□□□□ -1.44
PKP4-201ENST00000389757 EYSQ5T1H1 3165 aa6.05□□□□□ -1.44
PKP4-201ENST00000389757 BOD1L1Q8NFC6 3051 aa6.04□□□□□ -1.44
PKP4-201ENST00000389757 CAMK2N1Q7Z7J9 78 aa6.03□□□□□ -1.44
PKP4-201ENST00000389757 CDC42SE1Q9NRR8 79 aa6.03□□□□□ -1.44
PKP4-201ENST00000389757 VCANP13611 3396 aa6.03□□□□□ -1.44
PKP4-201ENST00000389757 ADGRG4Q8IZF6 3080 aa6.02□□□□□ -1.45
PKP4-201ENST00000389757 A0A1B0GU33 70 aa6.02□□□□□ -1.45
PKP4-201ENST00000389757 KALRNO60229 2985 aa6□□□□□ -1.45
PKP4-201ENST00000389757 NBEAQ8NFP9 2946 aa6□□□□□ -1.45
PKP4-201ENST00000389757 LRBAP50851 2863 aa5.99□□□□□ -1.45
PKP4-201ENST00000389757 KRTAP11-1Q8IUC1 163 aa5.99□□□□□ -1.45
PKP4-201ENST00000389757 NIPBLQ6KC79 2804 aaeCLIP5.98□□□□□ -1.455e-6■□□□□ 8.1
PKP4-201ENST00000389757 ZZEF1O43149 2961 aa5.98□□□□□ -1.45
PKP4-201ENST00000389757 DMBT1Q9UGM3 2413 aaPredicted RBP5.96□□□□□ -1.45
PKP4-201ENST00000389757 RPS29P62273 56 aaKnown RBP5.96□□□□□ -1.46
PKP4-201ENST00000389757 KRTAP7-1Q8IUC3 87 aa5.95□□□□□ -1.46
PKP4-201ENST00000389757 Q1T7F1 81 aa5.95□□□□□ -1.46
PKP4-201ENST00000389757 R4GN34 69 aa5.94□□□□□ -1.46
PKP4-201ENST00000389757 CRYBG3Q68DQ2 2970 aa5.94□□□□□ -1.46
PKP4-201ENST00000389757 FLG2Q5D862 2391 aaPredicted RBP5.93□□□□□ -1.46
PKP4-201ENST00000389757 DMXL1Q9Y485 3027 aa5.93□□□□□ -1.46
PKP4-201ENST00000389757 ASB16-AS1Q495Z4 193 aa5.92□□□□□ -1.46
PKP4-201ENST00000389757 DMAC1Q96GE9 116 aa5.92□□□□□ -1.46
PKP4-201ENST00000389757 LINC01558Q9Y6Z2 57 aa5.91□□□□□ -1.46
PKP4-201ENST00000389757 FREM2Q5SZK8 3169 aa5.9□□□□□ -1.47
PKP4-201ENST00000389757 KRTAP13-1Q8IUC0 172 aa5.89□□□□□ -1.47
PKP4-201ENST00000389757 DNAH14Q0VDD8 3507 aa5.89□□□□□ -1.47
PKP4-201ENST00000389757 KRTAP13-2Q52LG2 175 aa5.89□□□□□ -1.47
PKP4-201ENST00000389757 ZANQ9Y493 2812 aa5.88□□□□□ -1.47
PKP4-201ENST00000389757 KRTAP29-1A8MX34 341 aaPredicted RBP5.88□□□□□ -1.47
PKP4-201ENST00000389757 CELSR2Q9HCU4 2923 aa5.88□□□□□ -1.47
PKP4-201ENST00000389757 Q75L30 129 aa5.87□□□□□ -1.47
PKP4-201ENST00000389757 SPTBN5Q9NRC6 3674 aaKnown RBP5.85□□□□□ -1.47
PKP4-201ENST00000389757 NOTCH2NLQ7Z3S9 236 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms