RNA–Protein interactions for RNA: ENST00000384310.1

RNU6-339P-201, Transcript of RNA, U6 small nuclear 339, pseudogene, humanhuman

BASIC

Gene RNU6-339P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-339P-201ENST00000384310 WIZO95785 1651 aa0.27□□□□□ -2.37
RNU6-339P-201ENST00000384310 CNOT1A5YKK6 2376 aaKnown RBP0.26□□□□□ -2.37
RNU6-339P-201ENST00000384310 ABCA2Q9BZC7 2435 aa0.26□□□□□ -2.37
RNU6-339P-201ENST00000384310 IAPPP10997 89 aa0.26□□□□□ -2.37
RNU6-339P-201ENST00000384310 MYCBP2O75592 4640 aa0.26□□□□□ -2.37
RNU6-339P-201ENST00000384310 ADAMTS12P58397 1594 aa0.26□□□□□ -2.37
RNU6-339P-201ENST00000384310 ABCA9Q8IUA7 1624 aa0.26□□□□□ -2.37
RNU6-339P-201ENST00000384310 DDX60LQ5H9U9 1706 aaKnown RBP0.25□□□□□ -2.37
RNU6-339P-201ENST00000384310 DEPDC5O75140 1603 aa0.25□□□□□ -2.37
RNU6-339P-201ENST00000384310 MADDQ8WXG6 1647 aa0.25□□□□□ -2.37
RNU6-339P-201ENST00000384310 BSNQ9UPA5 3926 aa0.25□□□□□ -2.37
RNU6-339P-201ENST00000384310 DEFB114Q30KQ6 69 aa0.25□□□□□ -2.37
RNU6-339P-201ENST00000384310 S100ZQ8WXG8 99 aa0.25□□□□□ -2.37
RNU6-339P-201ENST00000384310 KIAA1109Q2LD37 5005 aa0.25□□□□□ -2.37
RNU6-339P-201ENST00000384310 IGSF10Q6WRI0 2623 aa0.25□□□□□ -2.37
RNU6-339P-201ENST00000384310 FASNP49327 2511 aaKnown RBP0.25□□□□□ -2.37
RNU6-339P-201ENST00000384310 UBR5O95071 2799 aaPredicted RBP0.24□□□□□ -2.37
RNU6-339P-201ENST00000384310 SETD2Q9BYW2 2564 aaPredicted RBP0.24□□□□□ -2.37
RNU6-339P-201ENST00000384310 LPAP08519 4548 aa0.24□□□□□ -2.37
RNU6-339P-201ENST00000384310 PLXNC1O60486 1568 aa0.23□□□□□ -2.37
RNU6-339P-201ENST00000384310 ZC3H13Q5T200 1668 aaKnown RBP0.23□□□□□ -2.37
RNU6-339P-201ENST00000384310 MAST4O15021 2626 aa0.23□□□□□ -2.37
RNU6-339P-201ENST00000384310 SPTA1P02549 2419 aa0.23□□□□□ -2.37
RNU6-339P-201ENST00000384310 KMT2CQ8NEZ4 4911 aaKnown RBP0.23□□□□□ -2.37
RNU6-339P-201ENST00000384310 CHD8Q9HCK8 2581 aa0.22□□□□□ -2.37
RNU6-339P-201ENST00000384310 RYR2Q92736 4967 aa0.22□□□□□ -2.37
RNU6-339P-201ENST00000384310 REV3LO60673 3130 aa0.22□□□□□ -2.37
RNU6-339P-201ENST00000384310 MROH1Q8NDA8 1641 aa0.21□□□□□ -2.38
RNU6-339P-201ENST00000384310 ACACBO00763 2458 aa0.21□□□□□ -2.38
RNU6-339P-201ENST00000384310 EP300Q09472 2414 aaPredicted RBP0.21□□□□□ -2.38
RNU6-339P-201ENST00000384310 PRKDCP78527 4128 aaKnown RBP0.21□□□□□ -2.38
RNU6-339P-201ENST00000384310 NHSQ6T4R5 1651 aa0.21□□□□□ -2.38
RNU6-339P-201ENST00000384310 KMT2AQ03164 3969 aa0.2□□□□□ -2.38
RNU6-339P-201ENST00000384310 SPRR2BP35325 72 aa0.2□□□□□ -2.38
RNU6-339P-201ENST00000384310 TJP1Q07157 1748 aa0.2□□□□□ -2.38
RNU6-339P-201ENST00000384310 ACANP16112 2415 aa0.19□□□□□ -2.38
RNU6-339P-201ENST00000384310 CREBBPQ92793 2442 aa0.19□□□□□ -2.38
RNU6-339P-201ENST00000384310 THOC2Q8NI27 1593 aaKnown RBP0.19□□□□□ -2.38
RNU6-339P-201ENST00000384310 RNF213Q63HN8 5207 aa0.19□□□□□ -2.38
RNU6-339P-201ENST00000384310 ABCC6O95255 1503 aa0.19□□□□□ -2.38
RNU6-339P-201ENST00000384310 NRAPQ86VF7 1730 aa0.19□□□□□ -2.38
RNU6-339P-201ENST00000384310 ANKRD11Q6UB99 2663 aaPredicted RBP0.19□□□□□ -2.38
RNU6-339P-201ENST00000384310 SFTA3P0C7M3 94 aa0.19□□□□□ -2.38
RNU6-339P-201ENST00000384310 MINOS1Q5TGZ0 78 aa0.19□□□□□ -2.38
RNU6-339P-201ENST00000384310 NCBP2-AS2Q69YL0 99 aa0.19□□□□□ -2.38
RNU6-339P-201ENST00000384310 SMIM5Q71RC9 77 aa0.19□□□□□ -2.38
RNU6-339P-201ENST00000384310 DMBT1Q9UGM3 2413 aaPredicted RBP0.19□□□□□ -2.38
RNU6-339P-201ENST00000384310 PARP4Q9UKK3 1724 aaKnown RBP0.18□□□□□ -2.38
RNU6-339P-201ENST00000384310 KNL1Q8NG31 2342 aa0.18□□□□□ -2.38
RNU6-339P-201ENST00000384310 DOPEY1Q5JWR5 2465 aa0.18□□□□□ -2.38
RNU6-339P-201ENST00000384310 K7EMI3 77 aa0.18□□□□□ -2.38
RNU6-339P-201ENST00000384310 ITSN1Q15811 1721 aa0.18□□□□□ -2.38
RNU6-339P-201ENST00000384310 TRANK1O15050 2925 aa0.17□□□□□ -2.38
RNU6-339P-201ENST00000384310 COL7A1Q02388 2944 aa0.17□□□□□ -2.38
RNU6-339P-201ENST00000384310 FCER1GP30273 86 aa0.17□□□□□ -2.38
RNU6-339P-201ENST00000384310 NBEAL2Q6ZNJ1 2754 aa0.17□□□□□ -2.38
RNU6-339P-201ENST00000384310 SPRR2GQ9BYE4 73 aa0.17□□□□□ -2.38
RNU6-339P-201ENST00000384310 PDZD2O15018 2839 aa0.17□□□□□ -2.38
RNU6-339P-201ENST00000384310 SETXQ7Z333 2677 aaKnown RBP0.17□□□□□ -2.38
RNU6-339P-201ENST00000384310 HMCN2Q8NDA2 5059 aa0.17□□□□□ -2.38
RNU6-339P-201ENST00000384310 ITPR1Q14643 2758 aa0.17□□□□□ -2.38
RNU6-339P-201ENST00000384310 RNF17Q9BXT8 1623 aaKnown RBP0.16□□□□□ -2.38
RNU6-339P-201ENST00000384310 ZANQ9Y493 2812 aa0.16□□□□□ -2.38
RNU6-339P-201ENST00000384310 HSPG2P98160 4391 aa0.15□□□□□ -2.39
RNU6-339P-201ENST00000384310 KIAA0586Q9BVV6 1533 aa0.15□□□□□ -2.39
RNU6-339P-201ENST00000384310 PRLHP81277 87 aa0.15□□□□□ -2.39
RNU6-339P-201ENST00000384310 NMES1Q9C002 83 aa0.15□□□□□ -2.39
RNU6-339P-201ENST00000384310 ALMS1Q8TCU4 4167 aa0.15□□□□□ -2.39
RNU6-339P-201ENST00000384310 INO80Q9ULG1 1556 aaPredicted RBP0.15□□□□□ -2.39
RNU6-339P-201ENST00000384310 ERICH3Q5RHP9 1530 aa0.14□□□□□ -2.39
RNU6-339P-201ENST00000384310 USP9XQ93008 2570 aaPredicted RBP0.14□□□□□ -2.39
RNU6-339P-201ENST00000384310 M0R1W7 72 aa0.13□□□□□ -2.39
RNU6-339P-201ENST00000384310 SERF2P84101 59 aa0.13□□□□□ -2.39
RNU6-339P-201ENST00000384310 C6orf48Q9UBA6 75 aa0.13□□□□□ -2.39
RNU6-339P-201ENST00000384310 BPTFQ12830 3046 aa0.13□□□□□ -2.39
RNU6-339P-201ENST00000384310 PDE4DIPQ5VU43 2346 aa0.13□□□□□ -2.39
RNU6-339P-201ENST00000384310 AKAP13Q12802 2813 aa0.12□□□□□ -2.39
RNU6-339P-201ENST00000384310 WT1-ASQ06250 92 aa0.12□□□□□ -2.39
RNU6-339P-201ENST00000384310 S4R3F8 94 aa0.12□□□□□ -2.39
RNU6-339P-201ENST00000384310 LRRK2Q5S007 2527 aa0.12□□□□□ -2.39
RNU6-339P-201ENST00000384310 WNK1Q9H4A3 2382 aa0.11□□□□□ -2.39
RNU6-339P-201ENST00000384310 RPS27P42677 84 aaKnown RBP0.11□□□□□ -2.39
RNU6-339P-201ENST00000384310 RPS27LQ71UM5 84 aaKnown RBP0.11□□□□□ -2.39
RNU6-339P-201ENST00000384310 DEFB106AQ8N104 65 aa0.11□□□□□ -2.39
RNU6-339P-201ENST00000384310 RYR1P21817 5038 aa0.11□□□□□ -2.39
RNU6-339P-201ENST00000384310 MAP1BP46821 2468 aaKnown RBP0.11□□□□□ -2.39
RNU6-339P-201ENST00000384310 CCDC168Q8NDH2 2452 aa0.11□□□□□ -2.39
RNU6-339P-201ENST00000384310 MUC12Q9UKN1 5478 aa0.1□□□□□ -2.39
RNU6-339P-201ENST00000384310 MGAM2Q2M2H8 2515 aa0.1□□□□□ -2.39
RNU6-339P-201ENST00000384310 APC2O95996 2303 aa0.1□□□□□ -2.39
RNU6-339P-201ENST00000384310 DCHS2Q6V1P9 2916 aa0.09□□□□□ -2.39
RNU6-339P-201ENST00000384310 USP9YO00507 2555 aaPredicted RBP0.09□□□□□ -2.4
RNU6-339P-201ENST00000384310 MYO18BQ8IUG5 2567 aa0.09□□□□□ -2.4
RNU6-339P-201ENST00000384310 FLNCQ14315 2725 aa0.09□□□□□ -2.4
RNU6-339P-201ENST00000384310 PCNX1Q96RV3 2341 aa0.09□□□□□ -2.4
RNU6-339P-201ENST00000384310 TENM2Q9NT68 2774 aa0.09□□□□□ -2.4
RNU6-339P-201ENST00000384310 CCDC180Q9P1Z9 1646 aa0.09□□□□□ -2.4
RNU6-339P-201ENST00000384310 HYDINQ4G0P3 5121 aa0.08□□□□□ -2.4
RNU6-339P-201ENST00000384310 H3BNG1 76 aa0.08□□□□□ -2.4
RNU6-339P-201ENST00000384310 DSPP15924 2871 aaKnown RBP0.08□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms