RNA–Protein interactions for RNA: ENST00000378610.1

CDKAL1-202, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDKAL1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-202ENST00000378610 A8MWP4 228 aa4.1□□□□□ -1.75
CDKAL1-202ENST00000378610 CIRBP-AS1Q8TBR5 109 aa4.1□□□□□ -1.75
CDKAL1-202ENST00000378610 EPG5Q9HCE0 2579 aa4.1□□□□□ -1.75
CDKAL1-202ENST00000378610 TENM2Q9NT68 2774 aa4.1□□□□□ -1.75
CDKAL1-202ENST00000378610 ATRXP46100 2492 aa4.1□□□□□ -1.75
CDKAL1-202ENST00000378610 KRTAP10-9P60411 292 aa4.1□□□□□ -1.75
CDKAL1-202ENST00000378610 SPTSSBQ8NFR3 76 aa4.1□□□□□ -1.75
CDKAL1-202ENST00000378610 CHD8Q9HCK8 2581 aa4.1□□□□□ -1.75
CDKAL1-202ENST00000378610 MMP24-AS1A0A0U1RRL7 71 aa4.1□□□□□ -1.75
CDKAL1-202ENST00000378610 CASC2Q6XLA1 102 aa4.1□□□□□ -1.75
CDKAL1-202ENST00000378610 ZFHX2Q9C0A1 2572 aaPredicted RBP4.09□□□□□ -1.75
CDKAL1-202ENST00000378610 SPRR1BP22528 89 aa4.09□□□□□ -1.75
CDKAL1-202ENST00000378610 WFDC13Q8IUB5 93 aa4.09□□□□□ -1.75
CDKAL1-202ENST00000378610 SPINK7P58062 85 aa4.09□□□□□ -1.75
CDKAL1-202ENST00000378610 WFDC10BQ8IUB3 73 aa4.08□□□□□ -1.76
CDKAL1-202ENST00000378610 LYSTQ99698 3801 aa4.08□□□□□ -1.76
CDKAL1-202ENST00000378610 CSPG4Q6UVK1 2322 aa4.08□□□□□ -1.76
CDKAL1-202ENST00000378610 DEFB116Q30KQ4 102 aa4.08□□□□□ -1.76
CDKAL1-202ENST00000378610 TRRAPQ9Y4A5 3859 aa4.07□□□□□ -1.76
CDKAL1-202ENST00000378610 LINC01556Q5JQF7 62 aa4.07□□□□□ -1.76
CDKAL1-202ENST00000378610 FAM168BA1KXE4 195 aa4.07□□□□□ -1.76
CDKAL1-202ENST00000378610 SPART-AS1P0CW21 52 aa4.07□□□□□ -1.76
CDKAL1-202ENST00000378610 RPL37AP61513 92 aaKnown RBP4.07□□□□□ -1.76
CDKAL1-202ENST00000378610 C2CD3Q4AC94 2353 aa4.07□□□□□ -1.76
CDKAL1-202ENST00000378610 TEX15Q9BXT5 2789 aa4.06□□□□□ -1.76
CDKAL1-202ENST00000378610 HRES1P13985 223 aa4.06□□□□□ -1.76
CDKAL1-202ENST00000378610 KRTAP10-3P60369 221 aa4.06□□□□□ -1.76
CDKAL1-202ENST00000378610 K7ERS5 55 aa4.06□□□□□ -1.76
CDKAL1-202ENST00000378610 RTL8CO15255 209 aa4.06□□□□□ -1.76
CDKAL1-202ENST00000378610 TP53AIP1Q9HCN2 124 aa4.06□□□□□ -1.76
CDKAL1-202ENST00000378610 A0A087WSZ3 146 aa4.06□□□□□ -1.76
CDKAL1-202ENST00000378610 DEFB131BA0A096LNP1 70 aa4.06□□□□□ -1.76
CDKAL1-202ENST00000378610 DEFB135Q30KP9 77 aa4.06□□□□□ -1.76
CDKAL1-202ENST00000378610 DEFB4AO15263 64 aa4.05□□□□□ -1.76
CDKAL1-202ENST00000378610 Q96NJ1 140 aa4.05□□□□□ -1.76
CDKAL1-202ENST00000378610 CFAP46Q8IYW2 2715 aa4.05□□□□□ -1.76
CDKAL1-202ENST00000378610 RIF1Q5UIP0 2472 aaKnown RBP4.05□□□□□ -1.76
CDKAL1-202ENST00000378610 A0A0G2JQZ4 141 aa4.04□□□□□ -1.76
CDKAL1-202ENST00000378610 A0A1W2PNN7 141 aa4.04□□□□□ -1.76
CDKAL1-202ENST00000378610 PRB2P02812 416 aaPredicted RBP4.04□□□□□ -1.76
CDKAL1-202ENST00000378610 ACACBO00763 2458 aa4.04□□□□□ -1.76
CDKAL1-202ENST00000378610 PTPN13Q12923 2485 aa4.04□□□□□ -1.76
CDKAL1-202ENST00000378610 IGKV2-24A0A0C4DH68 120 aa4.04□□□□□ -1.76
CDKAL1-202ENST00000378610 DOPEY1Q5JWR5 2465 aa4.04□□□□□ -1.76
CDKAL1-202ENST00000378610 ANKRD17O75179 2603 aaKnown RBP4.03□□□□□ -1.76
CDKAL1-202ENST00000378610 SPAG11AQ6PDA7 123 aa4.03□□□□□ -1.76
CDKAL1-202ENST00000378610 CREBBPQ92793 2442 aa4.03□□□□□ -1.76
CDKAL1-202ENST00000378610 DNAH3Q8TD57 4116 aa4.03□□□□□ -1.76
CDKAL1-202ENST00000378610 DNAH10OSP0CZ25 163 aa4.03□□□□□ -1.76
CDKAL1-202ENST00000378610 UNC79Q9P2D8 2635 aa4.02□□□□□ -1.77
CDKAL1-202ENST00000378610 UBR5O95071 2799 aaPredicted RBP4.02□□□□□ -1.77
CDKAL1-202ENST00000378610 KRTAP13-3Q3SY46 172 aa4.02□□□□□ -1.77
CDKAL1-202ENST00000378610 NF1P21359 2839 aa4.02□□□□□ -1.77
CDKAL1-202ENST00000378610 CSMD3Q7Z407 3707 aa4.02□□□□□ -1.77
CDKAL1-202ENST00000378610 TLN2Q9Y4G6 2542 aa4.02□□□□□ -1.77
CDKAL1-202ENST00000378610 NBASA2RRP1 2371 aa4.01□□□□□ -1.77
CDKAL1-202ENST00000378610 FAM208BQ5VWN6 2430 aa4.01□□□□□ -1.77
CDKAL1-202ENST00000378610 FASNP49327 2511 aaKnown RBP4.01□□□□□ -1.77
CDKAL1-202ENST00000378610 JMJD1CQ15652 2540 aa4□□□□□ -1.77
CDKAL1-202ENST00000378610 SPATA8Q6RVD6 105 aa4□□□□□ -1.77
CDKAL1-202ENST00000378610 KRTAP17-1Q9BYP8 105 aa4□□□□□ -1.77
CDKAL1-202ENST00000378610 GCN1Q92616 2671 aaKnown RBP4□□□□□ -1.77
CDKAL1-202ENST00000378610 CMYA5Q8N3K9 4069 aa4□□□□□ -1.77
CDKAL1-202ENST00000378610 USP24Q9UPU5 2620 aa4□□□□□ -1.77
CDKAL1-202ENST00000378610 NBEAL2Q6ZNJ1 2754 aa3.99□□□□□ -1.77
CDKAL1-202ENST00000378610 FLNCQ14315 2725 aa3.98□□□□□ -1.77
CDKAL1-202ENST00000378610 HIVEP1P15822 2718 aa3.98□□□□□ -1.77
CDKAL1-202ENST00000378610 HTN3P15516 51 aa3.97□□□□□ -1.77
CDKAL1-202ENST00000378610 DNAH9Q9NYC9 4486 aa3.97□□□□□ -1.77
CDKAL1-202ENST00000378610 DNAH10Q8IVF4 4471 aa3.97□□□□□ -1.77
CDKAL1-202ENST00000378610 PCOTHQ58A44 107 aa3.97□□□□□ -1.77
CDKAL1-202ENST00000378610 KRTAP13-1Q8IUC0 172 aa3.97□□□□□ -1.77
CDKAL1-202ENST00000378610 IGF2RP11717 2491 aa3.96□□□□□ -1.78
CDKAL1-202ENST00000378610 SPG11Q96JI7 2443 aa3.96□□□□□ -1.78
CDKAL1-202ENST00000378610 A8MUU9 505 aa3.96□□□□□ -1.78
CDKAL1-202ENST00000378610 FBN3Q75N90 2809 aa3.95□□□□□ -1.78
CDKAL1-202ENST00000378610 USP9XQ93008 2570 aaPredicted RBP3.95□□□□□ -1.78
CDKAL1-202ENST00000378610 PRLHP81277 87 aa3.95□□□□□ -1.78
CDKAL1-202ENST00000378610 KRTAP11-1Q8IUC1 163 aa3.95□□□□□ -1.78
CDKAL1-202ENST00000378610 DMAC1Q96GE9 116 aa3.94□□□□□ -1.78
CDKAL1-202ENST00000378610 RETNLBQ9BQ08 111 aa3.94□□□□□ -1.78
CDKAL1-202ENST00000378610 MYO9AB2RTY4 2548 aa3.94□□□□□ -1.78
CDKAL1-202ENST00000378610 VWFP04275 2813 aa3.94□□□□□ -1.78
CDKAL1-202ENST00000378610 DYNC2H1Q8NCM8 4307 aaKnown RBP3.94□□□□□ -1.78
CDKAL1-202ENST00000378610 FLNBO75369 2602 aaKnown RBP3.94□□□□□ -1.78
CDKAL1-202ENST00000378610 TYMSOSQ8TAI1 123 aa3.93□□□□□ -1.78
CDKAL1-202ENST00000378610 MAST4O15021 2626 aa3.93□□□□□ -1.78
CDKAL1-202ENST00000378610 PDZD2O15018 2839 aa3.93□□□□□ -1.78
CDKAL1-202ENST00000378610 LINC00483Q53H64 154 aa3.93□□□□□ -1.78
CDKAL1-202ENST00000378610 FRAS1Q86XX4 4008 aa3.93□□□□□ -1.78
CDKAL1-202ENST00000378610 ITPR3Q14573 2671 aa3.93□□□□□ -1.78
CDKAL1-202ENST00000378610 MRPL34Q9BQ48 92 aaKnown RBP3.92□□□□□ -1.78
CDKAL1-202ENST00000378610 FBN1P35555 2871 aaKnown RBP3.92□□□□□ -1.78
CDKAL1-202ENST00000378610 ZFYVE26Q68DK2 2539 aa3.92□□□□□ -1.78
CDKAL1-202ENST00000378610 A0A096LNI7 61 aa3.92□□□□□ -1.78
CDKAL1-202ENST00000378610 ACYP2P14621 99 aa3.91□□□□□ -1.78
CDKAL1-202ENST00000378610 LRRK2Q5S007 2527 aa3.9□□□□□ -1.78
CDKAL1-202ENST00000378610 FN1P02751 2386 aaKnown RBP3.9□□□□□ -1.78
CDKAL1-202ENST00000378610 USP9YO00507 2555 aaPredicted RBP3.9□□□□□ -1.78
CDKAL1-202ENST00000378610 IGSF10Q6WRI0 2623 aa3.9□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 158.9 ms