RNA–Protein interactions for RNA: ENST00000377833.8

CUBN-202, Transcript of cubilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUBN, Length 11,949 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBN-202ENST00000377833 KRTAP10-11P60412 298 aa3.84□□□□□ -1.8
CUBN-202ENST00000377833 SPRR1AP35321 89 aa3.83□□□□□ -1.8
CUBN-202ENST00000377833 A0A0C4DFX4 3053 aa3.82□□□□□ -1.8
CUBN-202ENST00000377833 C4orf26Q17RF5 130 aa3.82□□□□□ -1.8
CUBN-202ENST00000377833 Q6ZSA8 131 aa3.81□□□□□ -1.8
CUBN-202ENST00000377833 CHTF8P0CG12 524 aa3.81□□□□□ -1.8
CUBN-202ENST00000377833 SEC61BP60468 96 aaKnown RBP3.81□□□□□ -1.8
CUBN-202ENST00000377833 CSAG1Q6PB30 78 aa3.8□□□□□ -1.8
CUBN-202ENST00000377833 ZCCHC13Q8WW36 166 aaKnown RBP3.79□□□□□ -1.8
CUBN-202ENST00000377833 A0A1B0GU33 70 aa3.79□□□□□ -1.8
CUBN-202ENST00000377833 KRTAP1-1Q07627 177 aa3.79□□□□□ -1.8
CUBN-202ENST00000377833 DSCR10P59022 87 aa3.79□□□□□ -1.8
CUBN-202ENST00000377833 Q5XG85 94 aa3.79□□□□□ -1.8
CUBN-202ENST00000377833 A0A1W2PNM2 257 aa3.79□□□□□ -1.8
CUBN-202ENST00000377833 CASC10Q5T4H9 136 aa3.79□□□□□ -1.8
CUBN-202ENST00000377833 Q9UF83 564 aa3.78□□□□□ -1.8
CUBN-202ENST00000377833 A0A0A0MQY5 61 aa3.77□□□□□ -1.81
CUBN-202ENST00000377833 LINC01558Q9Y6Z2 57 aa3.76□□□□□ -1.81
CUBN-202ENST00000377833 KRTAP1-3Q8IUG1 177 aa3.76□□□□□ -1.81
CUBN-202ENST00000377833 LINC00472Q9H8W2 130 aa3.75□□□□□ -1.81
CUBN-202ENST00000377833 TENM4Q6N022 2769 aa3.74□□□□□ -1.81
CUBN-202ENST00000377833 S4R3F8 94 aa3.74□□□□□ -1.81
CUBN-202ENST00000377833 Q6ZR54 194 aa3.74□□□□□ -1.81
CUBN-202ENST00000377833 MMP24-AS1A0A0U1RRL7 71 aa3.73□□□□□ -1.81
CUBN-202ENST00000377833 OXTP01178 125 aa3.73□□□□□ -1.81
CUBN-202ENST00000377833 CAMK2N1Q7Z7J9 78 aa3.73□□□□□ -1.81
CUBN-202ENST00000377833 FRYLO94915 3013 aa3.73□□□□□ -1.81
CUBN-202ENST00000377833 KRTAP21-3Q3LHN1 58 aa3.72□□□□□ -1.81
CUBN-202ENST00000377833 CHD7Q9P2D1 2997 aa3.72□□□□□ -1.81
CUBN-202ENST00000377833 ZANQ9Y493 2812 aa3.72□□□□□ -1.81
CUBN-202ENST00000377833 LINC01554Q52M75 96 aa3.72□□□□□ -1.81
CUBN-202ENST00000377833 DNAH12Q6ZR08 3092 aa3.72□□□□□ -1.81
CUBN-202ENST00000377833 MGAQ8IWI9 3026 aa3.7□□□□□ -1.82
CUBN-202ENST00000377833 Q8N9P0 234 aaPredicted RBP3.7□□□□□ -1.82
CUBN-202ENST00000377833 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.69□□□□□ -1.82
CUBN-202ENST00000377833 R4GN34 69 aa3.69□□□□□ -1.82
CUBN-202ENST00000377833 A0A1W2PNN7 141 aa3.69□□□□□ -1.82
CUBN-202ENST00000377833 M0QZ58 72 aa3.69□□□□□ -1.82
CUBN-202ENST00000377833 NOTCH2NLQ7Z3S9 236 aa3.69□□□□□ -1.82
CUBN-202ENST00000377833 PDZD2O15018 2839 aa3.69□□□□□ -1.82
CUBN-202ENST00000377833 NBEAQ8NFP9 2946 aa3.69□□□□□ -1.82
CUBN-202ENST00000377833 C9orf92A6NGG3 77 aa3.69□□□□□ -1.82
CUBN-202ENST00000377833 PRR26Q8N8Z3 221 aa3.68□□□□□ -1.82
CUBN-202ENST00000377833 EIF4EBP3O60516 100 aaPredicted RBP3.68□□□□□ -1.82
CUBN-202ENST00000377833 LRBAP50851 2863 aa3.68□□□□□ -1.82
CUBN-202ENST00000377833 Q5W150 140 aa3.68□□□□□ -1.82
CUBN-202ENST00000377833 PANO1I0J062 215 aa3.67□□□□□ -1.82
CUBN-202ENST00000377833 TGP01266 2768 aa3.67□□□□□ -1.82
CUBN-202ENST00000377833 RPL37P61927 97 aaKnown RBP3.67□□□□□ -1.82
CUBN-202ENST00000377833 KRTAP10-3P60369 221 aa3.66□□□□□ -1.82
CUBN-202ENST00000377833 LCE6AA0A183 80 aa3.66□□□□□ -1.82
CUBN-202ENST00000377833 Q8N1X5 172 aa3.65□□□□□ -1.82
CUBN-202ENST00000377833 KRTAP4-16G5E9R7 235 aaPredicted RBP3.65□□□□□ -1.83
CUBN-202ENST00000377833 ROMO1P60602 79 aa3.64□□□□□ -1.83
CUBN-202ENST00000377833 ZZEF1O43149 2961 aa3.64□□□□□ -1.83
CUBN-202ENST00000377833 TNRC18O15417 2968 aaPredicted RBP3.63□□□□□ -1.83
CUBN-202ENST00000377833 Q5VV11 94 aa3.63□□□□□ -1.83
CUBN-202ENST00000377833 ANAPC11Q9NYG5 84 aa3.62□□□□□ -1.83
CUBN-202ENST00000377833 Q5VSD8 79 aa3.62□□□□□ -1.83
CUBN-202ENST00000377833 CELSR2Q9HCU4 2923 aa3.62□□□□□ -1.83
CUBN-202ENST00000377833 SPINK7P58062 85 aa3.61□□□□□ -1.83
CUBN-202ENST00000377833 M0R2T5 61 aa3.61□□□□□ -1.83
CUBN-202ENST00000377833 HRNRQ86YZ3 2850 aaPredicted RBP3.61□□□□□ -1.83
CUBN-202ENST00000377833 A0A0D9SG42 100 aa3.6□□□□□ -1.83
CUBN-202ENST00000377833 PP632Q6XCG6 107 aa3.6□□□□□ -1.83
CUBN-202ENST00000377833 TENM2Q9NT68 2774 aa3.59□□□□□ -1.83
CUBN-202ENST00000377833 CEP350Q5VT06 3117 aa3.59□□□□□ -1.83
CUBN-202ENST00000377833 TACC2O95359 2948 aa3.58□□□□□ -1.84
CUBN-202ENST00000377833 VWFP04275 2813 aa3.58□□□□□ -1.84
CUBN-202ENST00000377833 SPATA8Q6RVD6 105 aa3.58□□□□□ -1.84
CUBN-202ENST00000377833 KRTAP29-1A8MX34 341 aaPredicted RBP3.58□□□□□ -1.84
CUBN-202ENST00000377833 KRTAP26-1Q6PEX3 210 aa3.57□□□□□ -1.84
CUBN-202ENST00000377833 H1FX-AS1Q4G0G2 97 aa3.57□□□□□ -1.84
CUBN-202ENST00000377833 DCHS2Q6V1P9 2916 aa3.57□□□□□ -1.84
CUBN-202ENST00000377833 ASH1LQ9NR48 2969 aaKnown RBP3.56□□□□□ -1.84
CUBN-202ENST00000377833 PLAC4Q8WY50 150 aa3.56□□□□□ -1.84
CUBN-202ENST00000377833 SMR3BP02814 79 aaPredicted RBP3.54□□□□□ -1.84
CUBN-202ENST00000377833 SRCAPQ6ZRS2 3230 aa3.54□□□□□ -1.84
CUBN-202ENST00000377833 KRTAP1-5Q9BYS1 174 aa3.53□□□□□ -1.84
CUBN-202ENST00000377833 Q6ZRN7 208 aaPredicted RBP3.51□□□□□ -1.85
CUBN-202ENST00000377833 FRYQ5TBA9 3013 aa3.5□□□□□ -1.85
CUBN-202ENST00000377833 KRTAP13-1Q8IUC0 172 aa3.5□□□□□ -1.85
CUBN-202ENST00000377833 TNP1P09430 55 aa3.48□□□□□ -1.85
CUBN-202ENST00000377833 CRYBG3Q68DQ2 2970 aa3.48□□□□□ -1.85
CUBN-202ENST00000377833 Q8NDZ9 215 aa3.47□□□□□ -1.85
CUBN-202ENST00000377833 A0A0G2JQZ4 141 aa3.47□□□□□ -1.85
CUBN-202ENST00000377833 A8MUU9 505 aa3.46□□□□□ -1.86
CUBN-202ENST00000377833 C20orf166-AS1Q96NR2 134 aa3.45□□□□□ -1.86
CUBN-202ENST00000377833 SRRM2Q9UQ35 2752 aaKnown RBP3.45□□□□□ -1.86
CUBN-202ENST00000377833 GOLGB1Q14789 3259 aaKnown RBP3.45□□□□□ -1.86
CUBN-202ENST00000377833 PKD1L1Q8TDX9 2849 aa3.45□□□□□ -1.86
CUBN-202ENST00000377833 TPRXLQ17RH7 258 aa3.44□□□□□ -1.86
CUBN-202ENST00000377833 RANBP2P49792 3224 aaKnown RBP3.43□□□□□ -1.86
CUBN-202ENST00000377833 PCNTO95613 3336 aa3.43□□□□□ -1.86
CUBN-202ENST00000377833 A6NN06 94 aa3.42□□□□□ -1.86
CUBN-202ENST00000377833 KRTAP10-1P60331 282 aa3.42□□□□□ -1.86
CUBN-202ENST00000377833 ADM2Q7Z4H4 148 aa3.42□□□□□ -1.86
CUBN-202ENST00000377833 MEGF8Q7Z7M0 2845 aa3.42□□□□□ -1.86
CUBN-202ENST00000377833 KRTAP25-1Q3LHN0 102 aa3.42□□□□□ -1.86
CUBN-202ENST00000377833 LAMA2P24043 3122 aaKnown RBP3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms