RNA–Protein interactions for RNA: ENST00000377126.3

KLF9-201, Transcript of Kruppel like factor 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KLF9, Length 5,175 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLF9-201ENST00000377126 Q1T7F1 81 aa13.46□□□□□ -0.26
KLF9-201ENST00000377126 PLA2G1BP04054 148 aaKnown RBP13.45□□□□□ -0.26
KLF9-201ENST00000377126 Q96NJ1 140 aa13.44□□□□□ -0.26
KLF9-201ENST00000377126 ATMQ13315 3056 aa13.44□□□□□ -0.26
KLF9-201ENST00000377126 DSCR10P59022 87 aa13.43□□□□□ -0.26
KLF9-201ENST00000377126 SPEGQ15772 3267 aa13.42□□□□□ -0.26
KLF9-201ENST00000377126 IGLV7-43P04211 117 aa13.42□□□□□ -0.26
KLF9-201ENST00000377126 FAM229BQ4G0N7 80 aa13.42□□□□□ -0.26
KLF9-201ENST00000377126 UNC79Q9P2D8 2635 aa13.41□□□□□ -0.26
KLF9-201ENST00000377126 RBM12B-AS1Q9P1G2 102 aa13.4□□□□□ -0.26
KLF9-201ENST00000377126 SPRR1AP35321 89 aa13.39□□□□□ -0.27
KLF9-201ENST00000377126 FREM2Q5SZK8 3169 aa13.37□□□□□ -0.27
KLF9-201ENST00000377126 LRBAP50851 2863 aa13.37□□□□□ -0.27
KLF9-201ENST00000377126 KRTAP26-1Q6PEX3 210 aa13.36□□□□□ -0.27
KLF9-201ENST00000377126 FLNCQ14315 2725 aa13.36□□□□□ -0.27
KLF9-201ENST00000377126 SETXQ7Z333 2677 aaKnown RBP13.36□□□□□ -0.27
KLF9-201ENST00000377126 DMXL2Q8TDJ6 3036 aa13.35□□□□□ -0.27
KLF9-201ENST00000377126 SPANXA2-OT1Q8N9U9 137 aa13.33□□□□□ -0.27
KLF9-201ENST00000377126 NBEAL2Q6ZNJ1 2754 aa13.33□□□□□ -0.28
KLF9-201ENST00000377126 CDC42SE1Q9NRR8 79 aa13.32□□□□□ -0.28
KLF9-201ENST00000377126 TNRC18O15417 2968 aaPredicted RBP13.32□□□□□ -0.28
KLF9-201ENST00000377126 EYSQ5T1H1 3165 aa13.31□□□□□ -0.28
KLF9-201ENST00000377126 TEP1Q99973 2627 aaKnown RBP13.3□□□□□ -0.28
KLF9-201ENST00000377126 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.28□□□□□ -0.28
KLF9-201ENST00000377126 COL12A1Q99715 3063 aa13.25□□□□□ -0.29
KLF9-201ENST00000377126 IGLV8-61A0A075B6I0 122 aa13.24□□□□□ -0.29
KLF9-201ENST00000377126 LINC00304Q8N9R0 145 aa13.24□□□□□ -0.29
KLF9-201ENST00000377126 ITPR1Q14643 2758 aa13.21□□□□□ -0.3
KLF9-201ENST00000377126 UQCR11O14957 56 aa13.2□□□□□ -0.3
KLF9-201ENST00000377126 NOTCH1P46531 2555 aa13.19□□□□□ -0.3
KLF9-201ENST00000377126 UBR5O95071 2799 aaPredicted RBP13.18□□□□□ -0.3
KLF9-201ENST00000377126 COL6A5A8TX70 2615 aa13.18□□□□□ -0.3
KLF9-201ENST00000377126 KRTAP1-5Q9BYS1 174 aa13.17□□□□□ -0.3
KLF9-201ENST00000377126 TNP2Q05952 138 aa13.16□□□□□ -0.3
KLF9-201ENST00000377126 MIR22HGQ0VDD5 57 aa13.15□□□□□ -0.3
KLF9-201ENST00000377126 TACC2O95359 2948 aa13.15□□□□□ -0.3
KLF9-201ENST00000377126 SPRR1BP22528 89 aa13.14□□□□□ -0.31
KLF9-201ENST00000377126 USP34Q70CQ2 3546 aa13.13□□□□□ -0.31
KLF9-201ENST00000377126 H3BS24 57 aa13.12□□□□□ -0.31
KLF9-201ENST00000377126 SMR3BP02814 79 aaPredicted RBP13.1□□□□□ -0.31
KLF9-201ENST00000377126 STAB1Q9NY15 2570 aa13.1□□□□□ -0.31
KLF9-201ENST00000377126 Q75L30 129 aa13.1□□□□□ -0.31
KLF9-201ENST00000377126 MMP24-AS1A0A0U1RRL7 71 aa13.09□□□□□ -0.31
KLF9-201ENST00000377126 PLAC8Q9NZF1 115 aa13.08□□□□□ -0.32
KLF9-201ENST00000377126 DMXL1Q9Y485 3027 aa13.08□□□□□ -0.32
KLF9-201ENST00000377126 C9orf92A6NGG3 77 aa13.07□□□□□ -0.32
KLF9-201ENST00000377126 SPINT4Q6UDR6 99 aa13.07□□□□□ -0.32
KLF9-201ENST00000377126 Q8N9P0 234 aaPredicted RBP13.07□□□□□ -0.32
KLF9-201ENST00000377126 UTP20O75691 2785 aaKnown RBP13.06□□□□□ -0.32
KLF9-201ENST00000377126 Q5VV11 94 aa13.06□□□□□ -0.32
KLF9-201ENST00000377126 LINC00472Q9H8W2 130 aa13.05□□□□□ -0.32
KLF9-201ENST00000377126 IGLV7-46A0A075B6I9 117 aa13.05□□□□□ -0.32
KLF9-201ENST00000377126 KRTAP4-16G5E9R7 235 aaPredicted RBP13.03□□□□□ -0.32
KLF9-201ENST00000377126 LOC400499M0QZD8 3231 aa13.02□□□□□ -0.33
KLF9-201ENST00000377126 ZZEF1O43149 2961 aa13□□□□□ -0.33
KLF9-201ENST00000377126 MYO15AQ9UKN7 3530 aa13□□□□□ -0.33
KLF9-201ENST00000377126 LINC01554Q52M75 96 aa13□□□□□ -0.33
KLF9-201ENST00000377126 PRR26Q8N8Z3 221 aa12.96□□□□□ -0.33
KLF9-201ENST00000377126 PRAC1Q96KF2 57 aa12.96□□□□□ -0.33
KLF9-201ENST00000377126 CFAP47Q6ZTR5 3102 aa12.95□□□□□ -0.34
KLF9-201ENST00000377126 HRNRQ86YZ3 2850 aaPredicted RBP12.95□□□□□ -0.34
KLF9-201ENST00000377126 NBEAL1Q6ZS30 2694 aa12.92□□□□□ -0.34
KLF9-201ENST00000377126 ITPR2Q14571 2701 aa12.92□□□□□ -0.34
KLF9-201ENST00000377126 Q8N1X5 172 aa12.9□□□□□ -0.34
KLF9-201ENST00000377126 LINC01558Q9Y6Z2 57 aa12.88□□□□□ -0.35
KLF9-201ENST00000377126 HRES1P13985 223 aa12.88□□□□□ -0.35
KLF9-201ENST00000377126 ZANQ9Y493 2812 aa12.86□□□□□ -0.35
KLF9-201ENST00000377126 APCP25054 2843 aa12.83□□□□□ -0.36
KLF9-201ENST00000377126 PANO1I0J062 215 aa12.8□□□□□ -0.36
KLF9-201ENST00000377126 LINC00483Q53H64 154 aa12.78□□□□□ -0.36
KLF9-201ENST00000377126 SPINK7P58062 85 aa12.77□□□□□ -0.37
KLF9-201ENST00000377126 ASH1LQ9NR48 2969 aaKnown RBP12.76□□□□□ -0.37
KLF9-201ENST00000377126 NSD1Q96L73 2696 aaPredicted RBP12.75□□□□□ -0.37
KLF9-201ENST00000377126 KRTAP29-1A8MX34 341 aaPredicted RBP12.72□□□□□ -0.37
KLF9-201ENST00000377126 KRTAP7-1Q8IUC3 87 aa12.72□□□□□ -0.37
KLF9-201ENST00000377126 Q5W150 140 aa12.72□□□□□ -0.37
KLF9-201ENST00000377126 HIVEP1P15822 2718 aa12.68□□□□□ -0.38
KLF9-201ENST00000377126 ZCCHC13Q8WW36 166 aaKnown RBP12.66□□□□□ -0.38
KLF9-201ENST00000377126 KRTAP11-1Q8IUC1 163 aa12.65□□□□□ -0.38
KLF9-201ENST00000377126 CSAG1Q6PB30 78 aa12.64□□□□□ -0.39
KLF9-201ENST00000377126 KRTAP10-2P60368 255 aa12.64□□□□□ -0.39
KLF9-201ENST00000377126 BAHCC1Q9P281 2608 aa12.64□□□□□ -0.39
KLF9-201ENST00000377126 Q6ZR54 194 aa12.63□□□□□ -0.39
KLF9-201ENST00000377126 NIPBLQ6KC79 2804 aaeCLIP12.63□□□□□ -0.39
KLF9-201ENST00000377126 KMT2BQ9UMN6 2715 aaPredicted RBP12.63□□□□□ -0.39
KLF9-201ENST00000377126 KRTAP10-1P60331 282 aa12.61□□□□□ -0.39
KLF9-201ENST00000377126 J3QL48 77 aa12.61□□□□□ -0.39
KLF9-201ENST00000377126 CELSR2Q9HCU4 2923 aa12.59□□□□□ -0.39
KLF9-201ENST00000377126 CRIPTQ9P021 101 aa12.58□□□□□ -0.4
KLF9-201ENST00000377126 Q6ZRN7 208 aaPredicted RBP12.57□□□□□ -0.4
KLF9-201ENST00000377126 STAB2Q8WWQ8 2551 aa12.53□□□□□ -0.4
KLF9-201ENST00000377126 FBN2P35556 2912 aa12.51□□□□□ -0.41
KLF9-201ENST00000377126 A6NN06 94 aa12.51□□□□□ -0.41
KLF9-201ENST00000377126 WDFY3Q8IZQ1 3526 aa12.49□□□□□ -0.41
KLF9-201ENST00000377126 LCE6AA0A183 80 aa12.49□□□□□ -0.41
KLF9-201ENST00000377126 A0A1B0GU33 70 aa12.49□□□□□ -0.41
KLF9-201ENST00000377126 NF1P21359 2839 aa12.48□□□□□ -0.41
KLF9-201ENST00000377126 A0A0D9SG42 100 aa12.47□□□□□ -0.41
KLF9-201ENST00000377126 CRYBG3Q68DQ2 2970 aa12.46□□□□□ -0.41
KLF9-201ENST00000377126 A8MU10 97 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms