RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 PSCAO43653 123 aa7.06□□□□□ -1.28
CCDC40-203ENST00000374877 WFDC13Q8IUB5 93 aa7.06□□□□□ -1.28
CCDC40-203ENST00000374877 DNAH10OSP0CZ25 163 aa7.06□□□□□ -1.28
CCDC40-203ENST00000374877 ZCCHC13Q8WW36 166 aaKnown RBP7.06□□□□□ -1.28
CCDC40-203ENST00000374877 IGLV5-37A0A075B6J1 123 aa7.06□□□□□ -1.28
CCDC40-203ENST00000374877 C1orf195Q5TG92 126 aa7.06□□□□□ -1.28
CCDC40-203ENST00000374877 REG3GQ6UW15 175 aa7.04□□□□□ -1.28
CCDC40-203ENST00000374877 PSPHP1O15172 72 aa7.03□□□□□ -1.28
CCDC40-203ENST00000374877 IGFL1Q6UW32 110 aa7.03□□□□□ -1.28
CCDC40-203ENST00000374877 A0A087WSZ3 146 aa7.02□□□□□ -1.28
CCDC40-203ENST00000374877 NUPR2A6NF83 97 aa7.02□□□□□ -1.29
CCDC40-203ENST00000374877 PRLHP81277 87 aa7.02□□□□□ -1.29
CCDC40-203ENST00000374877 LINC00588Q9Y4M8 146 aa7.02□□□□□ -1.29
CCDC40-203ENST00000374877 MP68P56378 58 aa7.01□□□□□ -1.29
CCDC40-203ENST00000374877 RPL37AP61513 92 aaKnown RBP7□□□□□ -1.29
CCDC40-203ENST00000374877 IGKV2-24A0A0C4DH68 120 aa7□□□□□ -1.29
CCDC40-203ENST00000374877 Q1T7F1 81 aa7□□□□□ -1.29
CCDC40-203ENST00000374877 APLNQ9ULZ1 77 aa7□□□□□ -1.29
CCDC40-203ENST00000374877 LINC00208Q96KT6 92 aa7□□□□□ -1.29
CCDC40-203ENST00000374877 DYNC2H1Q8NCM8 4307 aaKnown RBP6.99□□□□□ -1.29
CCDC40-203ENST00000374877 NDUFB1O75438 58 aa6.98□□□□□ -1.29
CCDC40-203ENST00000374877 CYP4F30PQ9H0H9 118 aa6.98□□□□□ -1.29
CCDC40-203ENST00000374877 TRAV22A0A0B4J277 110 aa6.98□□□□□ -1.29
CCDC40-203ENST00000374877 V9GYY9 64 aa6.97□□□□□ -1.29
CCDC40-203ENST00000374877 PRKDCP78527 4128 aaKnown RBP6.97□□□□□ -1.29
CCDC40-203ENST00000374877 MEGF8Q7Z7M0 2845 aa6.96□□□□□ -1.29
CCDC40-203ENST00000374877 UBE2AP49459 152 aa6.96□□□□□ -1.3
CCDC40-203ENST00000374877 A0A096LNI7 61 aa6.94□□□□□ -1.3
CCDC40-203ENST00000374877 A8MUN3 132 aa6.94□□□□□ -1.3
CCDC40-203ENST00000374877 H0Y9P7 68 aa6.94□□□□□ -1.3
CCDC40-203ENST00000374877 CASC2Q6XLA1 102 aa6.94□□□□□ -1.3
CCDC40-203ENST00000374877 PRR15Q8IV56 129 aa6.93□□□□□ -1.3
CCDC40-203ENST00000374877 STAB2Q8WWQ8 2551 aa6.93□□□□□ -1.3
CCDC40-203ENST00000374877 UBE2DNLQ8IWF7 75 aa6.92□□□□□ -1.3
CCDC40-203ENST00000374877 COL7A1Q02388 2944 aa6.92□□□□□ -1.3
CCDC40-203ENST00000374877 KRTAP29-1A8MX34 341 aaPredicted RBP6.91□□□□□ -1.3
CCDC40-203ENST00000374877 SRRM2Q9UQ35 2752 aaKnown RBP6.91□□□□□ -1.3
CCDC40-203ENST00000374877 IGLV8-61A0A075B6I0 122 aa6.91□□□□□ -1.3
CCDC40-203ENST00000374877 C16orf90A8MZG2 172 aa6.9□□□□□ -1.31
CCDC40-203ENST00000374877 CNBPP62633 177 aaKnown RBP6.89□□□□□ -1.31
CCDC40-203ENST00000374877 WWC2-AS2Q96NR7 200 aa6.89□□□□□ -1.31
CCDC40-203ENST00000374877 DNAH7Q8WXX0 4024 aa6.89□□□□□ -1.31
CCDC40-203ENST00000374877 H0Y9J4 135 aa6.88□□□□□ -1.31
CCDC40-203ENST00000374877 PHF5AQ7RTV0 110 aaKnown RBP6.88□□□□□ -1.31
CCDC40-203ENST00000374877 CHTF8P0CG12 524 aa6.88□□□□□ -1.31
CCDC40-203ENST00000374877 A8MWP4 228 aa6.87□□□□□ -1.31
CCDC40-203ENST00000374877 PMAIP1Q13794 54 aa6.87□□□□□ -1.31
CCDC40-203ENST00000374877 FBN3Q75N90 2809 aa6.87□□□□□ -1.31
CCDC40-203ENST00000374877 A8MU10 97 aa6.87□□□□□ -1.31
CCDC40-203ENST00000374877 KRTAP11-1Q8IUC1 163 aa6.87□□□□□ -1.31
CCDC40-203ENST00000374877 SEC61GP60059 68 aa6.86□□□□□ -1.31
CCDC40-203ENST00000374877 Q5VV11 94 aa6.86□□□□□ -1.31
CCDC40-203ENST00000374877 SPANXA2-OT1Q8N9U9 137 aa6.86□□□□□ -1.31
CCDC40-203ENST00000374877 H3BPC8 53 aa6.85□□□□□ -1.31
CCDC40-203ENST00000374877 CHKB-CPT1BH3BT56 60 aa6.85□□□□□ -1.31
CCDC40-203ENST00000374877 KRTAP1-5Q9BYS1 174 aa6.85□□□□□ -1.31
CCDC40-203ENST00000374877 LINC00472Q9H8W2 130 aa6.85□□□□□ -1.31
CCDC40-203ENST00000374877 DNAH1Q9P2D7 4330 aa6.84□□□□□ -1.31
CCDC40-203ENST00000374877 NBDYA0A0U1RRE5 68 aa6.84□□□□□ -1.31
CCDC40-203ENST00000374877 PRR15LQ9BU68 103 aa6.84□□□□□ -1.31
CCDC40-203ENST00000374877 Q8N9P0 234 aaPredicted RBP6.84□□□□□ -1.32
CCDC40-203ENST00000374877 PLECQ15149 4684 aaKnown RBP6.83□□□□□ -1.32
CCDC40-203ENST00000374877 VPS13DQ5THJ4 4388 aa6.82□□□□□ -1.32
CCDC40-203ENST00000374877 LIMD2Q9BT23 127 aa6.82□□□□□ -1.32
CCDC40-203ENST00000374877 DNAH10Q8IVF4 4471 aa6.82□□□□□ -1.32
CCDC40-203ENST00000374877 PCOTHQ58A44 107 aa6.81□□□□□ -1.32
CCDC40-203ENST00000374877 C9orf163Q8N9P6 203 aa6.81□□□□□ -1.32
CCDC40-203ENST00000374877 SPRR1BP22528 89 aa6.81□□□□□ -1.32
CCDC40-203ENST00000374877 MMP24-AS1A0A0U1RRL7 71 aa6.8□□□□□ -1.32
CCDC40-203ENST00000374877 STARD9Q9P2P6 4700 aa6.8□□□□□ -1.32
CCDC40-203ENST00000374877 COA5Q86WW8 74 aa6.8□□□□□ -1.32
CCDC40-203ENST00000374877 CSMD3Q7Z407 3707 aa6.78□□□□□ -1.32
CCDC40-203ENST00000374877 IGLV9-49A0A0B4J1Y8 123 aa6.78□□□□□ -1.32
CCDC40-203ENST00000374877 SPTSSBQ8NFR3 76 aa6.78□□□□□ -1.32
CCDC40-203ENST00000374877 Q6ZR54 194 aa6.77□□□□□ -1.32
CCDC40-203ENST00000374877 C14orf177Q52M58 125 aa6.77□□□□□ -1.33
CCDC40-203ENST00000374877 Q6ZRN7 208 aaPredicted RBP6.76□□□□□ -1.33
CCDC40-203ENST00000374877 ALMS1Q8TCU4 4167 aa6.76□□□□□ -1.33
CCDC40-203ENST00000374877 A6NED7 52 aa6.76□□□□□ -1.33
CCDC40-203ENST00000374877 IGLV7-46A0A075B6I9 117 aa6.76□□□□□ -1.33
CCDC40-203ENST00000374877 NDUFS5O43920 106 aa6.76□□□□□ -1.33
CCDC40-203ENST00000374877 DNAH6Q9C0G6 4158 aa6.75□□□□□ -1.33
CCDC40-203ENST00000374877 LYSTQ99698 3801 aa6.74□□□□□ -1.33
CCDC40-203ENST00000374877 CD164Q04900 197 aa6.73□□□□□ -1.33
CCDC40-203ENST00000374877 LY6G6CO95867 125 aa6.73□□□□□ -1.33
CCDC40-203ENST00000374877 IGHV6-1A0A0B4J1U7 121 aa6.72□□□□□ -1.33
CCDC40-203ENST00000374877 PANO1I0J062 215 aa6.72□□□□□ -1.33
CCDC40-203ENST00000374877 SPAG11AQ6PDA7 123 aa6.72□□□□□ -1.33
CCDC40-203ENST00000374877 Q75L30 129 aa6.72□□□□□ -1.33
CCDC40-203ENST00000374877 LCA10Q71F78 164 aa6.71□□□□□ -1.33
CCDC40-203ENST00000374877 TP53AIP1Q9HCN2 124 aa6.71□□□□□ -1.33
CCDC40-203ENST00000374877 C8orf17Q9NRJ1 99 aa6.71□□□□□ -1.33
CCDC40-203ENST00000374877 TENM2Q9NT68 2774 aa6.71□□□□□ -1.33
CCDC40-203ENST00000374877 MOBPQ13875 183 aa6.71□□□□□ -1.34
CCDC40-203ENST00000374877 Q96NJ1 140 aa6.71□□□□□ -1.34
CCDC40-203ENST00000374877 LOC101927531A0A1B0GV80 90 aa6.7□□□□□ -1.34
CCDC40-203ENST00000374877 C1orf134Q5TEV5 83 aa6.7□□□□□ -1.34
CCDC40-203ENST00000374877 CDK2AP2O75956 126 aa6.69□□□□□ -1.34
CCDC40-203ENST00000374877 KRTAP13-1Q8IUC0 172 aa6.69□□□□□ -1.34
CCDC40-203ENST00000374877 A0A087WTM6 91 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms