RNA–Protein interactions for RNA: ENST00000374342.6

PTPN20-203, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,929 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-203ENST00000374342 KRTAP10-1P60331 282 aa10.36□□□□□ -0.75
PTPN20-203ENST00000374342 FAT2Q9NYQ8 4349 aa10.36□□□□□ -0.75
PTPN20-203ENST00000374342 PKD1P98161 4303 aa10.35□□□□□ -0.75
PTPN20-203ENST00000374342 SPRR1BP22528 89 aa10.35□□□□□ -0.75
PTPN20-203ENST00000374342 ATP5EP2Q5VTU8 51 aa10.35□□□□□ -0.75
PTPN20-203ENST00000374342 SACSQ9NZJ4 4579 aa10.34□□□□□ -0.75
PTPN20-203ENST00000374342 CIRBP-AS1Q8TBR5 109 aa10.34□□□□□ -0.75
PTPN20-203ENST00000374342 A0A1W2PNM2 257 aa10.33□□□□□ -0.76
PTPN20-203ENST00000374342 SRRM2Q9UQ35 2752 aaKnown RBP10.33□□□□□ -0.76
PTPN20-203ENST00000374342 SCXQ7RTU7 201 aa10.33□□□□□ -0.76
PTPN20-203ENST00000374342 Q8NBF4 154 aa10.33□□□□□ -0.76
PTPN20-203ENST00000374342 HAMPP81172 84 aa10.32□□□□□ -0.76
PTPN20-203ENST00000374342 Q6ZSA8 131 aa10.31□□□□□ -0.76
PTPN20-203ENST00000374342 A0A0G2JQZ4 141 aa10.31□□□□□ -0.76
PTPN20-203ENST00000374342 IGFL1Q6UW32 110 aa10.31□□□□□ -0.76
PTPN20-203ENST00000374342 IGLV8-61A0A075B6I0 122 aa10.3□□□□□ -0.76
PTPN20-203ENST00000374342 FAM236AA0A1B0GUQ0 79 aa10.3□□□□□ -0.76
PTPN20-203ENST00000374342 FAM236BA0A1B0GV22 79 aa10.3□□□□□ -0.76
PTPN20-203ENST00000374342 SPRR4Q96PI1 79 aa10.29□□□□□ -0.76
PTPN20-203ENST00000374342 ZNF861PO60384 105 aa10.28□□□□□ -0.76
PTPN20-203ENST00000374342 HIST1H4AP62805 103 aaKnown RBP10.28□□□□□ -0.76
PTPN20-203ENST00000374342 A0A087WVE0 104 aa10.27□□□□□ -0.77
PTPN20-203ENST00000374342 ZNF706Q9Y5V0 76 aaPredicted RBP10.27□□□□□ -0.77
PTPN20-203ENST00000374342 ANAPC13Q9BS18 74 aa10.26□□□□□ -0.77
PTPN20-203ENST00000374342 IGLV7-43P04211 117 aa10.25□□□□□ -0.77
PTPN20-203ENST00000374342 NREPQ16612 68 aa10.25□□□□□ -0.77
PTPN20-203ENST00000374342 LINC00336Q6ZUF6 198 aa10.25□□□□□ -0.77
PTPN20-203ENST00000374342 A0A1B0GW54 56 aa10.25□□□□□ -0.77
PTPN20-203ENST00000374342 CXCL6P80162 114 aa10.23□□□□□ -0.77
PTPN20-203ENST00000374342 CRYGAP11844 174 aa10.23□□□□□ -0.77
PTPN20-203ENST00000374342 LINC00483Q53H64 154 aa10.23□□□□□ -0.77
PTPN20-203ENST00000374342 IGLV9-49A0A0B4J1Y8 123 aa10.22□□□□□ -0.77
PTPN20-203ENST00000374342 C9orf153Q5TBE3 101 aa10.21□□□□□ -0.77
PTPN20-203ENST00000374342 ANAPC11Q9NYG5 84 aa10.18□□□□□ -0.78
PTPN20-203ENST00000374342 BPY2O14599 106 aa10.17□□□□□ -0.78
PTPN20-203ENST00000374342 A0A087WSZ3 146 aa10.17□□□□□ -0.78
PTPN20-203ENST00000374342 A0A1B0GVY2 172 aa10.15□□□□□ -0.79
PTPN20-203ENST00000374342 MOBPQ13875 183 aa10.14□□□□□ -0.79
PTPN20-203ENST00000374342 Q8N9L7 120 aa10.14□□□□□ -0.79
PTPN20-203ENST00000374342 RYR2Q92736 4967 aa10.13□□□□□ -0.79
PTPN20-203ENST00000374342 ATOX1O00244 68 aa10.12□□□□□ -0.79
PTPN20-203ENST00000374342 PKHD1P08F94 4074 aa10.1□□□□□ -0.79
PTPN20-203ENST00000374342 IGKV4-1P06312 121 aa10.1□□□□□ -0.79
PTPN20-203ENST00000374342 RPL37AP61513 92 aaKnown RBP10.09□□□□□ -0.79
PTPN20-203ENST00000374342 LRP1BQ9NZR2 4599 aa10.09□□□□□ -0.79
PTPN20-203ENST00000374342 HRCT1Q6UXD1 115 aa10.07□□□□□ -0.8
PTPN20-203ENST00000374342 DEFB116Q30KQ4 102 aa10.06□□□□□ -0.8
PTPN20-203ENST00000374342 KMT2CQ8NEZ4 4911 aaKnown RBP10.05□□□□□ -0.8
PTPN20-203ENST00000374342 CCDC179H3BU77 68 aa10.05□□□□□ -0.8
PTPN20-203ENST00000374342 DSCR10P59022 87 aa10.05□□□□□ -0.8
PTPN20-203ENST00000374342 DYNC1H1Q14204 4646 aaKnown RBP10.04□□□□□ -0.8
PTPN20-203ENST00000374342 K7EQZ3 153 aa10.02□□□□□ -0.81
PTPN20-203ENST00000374342 SERP2Q8N6R1 65 aa9.99□□□□□ -0.81
PTPN20-203ENST00000374342 A0A087X002 238 aa9.98□□□□□ -0.81
PTPN20-203ENST00000374342 SMR3BP02814 79 aaPredicted RBP9.98□□□□□ -0.81
PTPN20-203ENST00000374342 COX7CP15954 63 aa9.98□□□□□ -0.81
PTPN20-203ENST00000374342 LINC00472Q9H8W2 130 aa9.98□□□□□ -0.81
PTPN20-203ENST00000374342 SS18L2Q9UHA2 77 aa9.97□□□□□ -0.81
PTPN20-203ENST00000374342 UQCRQO14949 82 aa9.96□□□□□ -0.81
PTPN20-203ENST00000374342 FAM229BQ4G0N7 80 aa9.95□□□□□ -0.82
PTPN20-203ENST00000374342 VPS13BQ7Z7G8 4022 aa9.95□□□□□ -0.82
PTPN20-203ENST00000374342 KRTAP1-4P0C5Y4 121 aa9.95□□□□□ -0.82
PTPN20-203ENST00000374342 KRTAP13-2Q52LG2 175 aa9.94□□□□□ -0.82
PTPN20-203ENST00000374342 SSBP3-AS1Q7Z2R9 100 aa9.94□□□□□ -0.82
PTPN20-203ENST00000374342 Q96NJ1 140 aa9.93□□□□□ -0.82
PTPN20-203ENST00000374342 APOBP04114 4563 aaKnown RBP9.92□□□□□ -0.82
PTPN20-203ENST00000374342 SMIM20Q8N5G0 67 aa9.92□□□□□ -0.82
PTPN20-203ENST00000374342 TRAV7A0A075B6U4 112 aa9.91□□□□□ -0.82
PTPN20-203ENST00000374342 A8MWP4 228 aa9.91□□□□□ -0.82
PTPN20-203ENST00000374342 J3KT08 172 aa9.91□□□□□ -0.82
PTPN20-203ENST00000374342 HCG22E2RYF7 251 aa9.9□□□□□ -0.82
PTPN20-203ENST00000374342 CD164Q04900 197 aa9.9□□□□□ -0.82
PTPN20-203ENST00000374342 SPINK6Q6UWN8 80 aa9.9□□□□□ -0.82
PTPN20-203ENST00000374342 PRR15Q8IV56 129 aa9.88□□□□□ -0.83
PTPN20-203ENST00000374342 PLA2G1BP04054 148 aaKnown RBP9.88□□□□□ -0.83
PTPN20-203ENST00000374342 WFDC13Q8IUB5 93 aa9.87□□□□□ -0.83
PTPN20-203ENST00000374342 NDUFB1O75438 58 aa9.84□□□□□ -0.83
PTPN20-203ENST00000374342 KRTAP10-4P60372 401 aaPredicted RBP9.84□□□□□ -0.83
PTPN20-203ENST00000374342 OCR1Q9BZK8 76 aa9.84□□□□□ -0.83
PTPN20-203ENST00000374342 RYR3Q15413 4870 aa9.83□□□□□ -0.84
PTPN20-203ENST00000374342 TYMSOSQ8TAI1 123 aa9.82□□□□□ -0.84
PTPN20-203ENST00000374342 CDK2AP2O75956 126 aa9.81□□□□□ -0.84
PTPN20-203ENST00000374342 C20orf197Q8N268 126 aa9.81□□□□□ -0.84
PTPN20-203ENST00000374342 CASC2Q6XLA1 102 aa9.8□□□□□ -0.84
PTPN20-203ENST00000374342 CYSTM1Q9H1C7 97 aa9.8□□□□□ -0.84
PTPN20-203ENST00000374342 MMP24-AS1A0A0U1RRL7 71 aa9.78□□□□□ -0.84
PTPN20-203ENST00000374342 KRTAP29-1A8MX34 341 aaPredicted RBP9.78□□□□□ -0.84
PTPN20-203ENST00000374342 PRR26Q8N8Z3 221 aa9.78□□□□□ -0.84
PTPN20-203ENST00000374342 IGHV6-1A0A0B4J1U7 121 aa9.78□□□□□ -0.84
PTPN20-203ENST00000374342 FAT1Q14517 4588 aa9.77□□□□□ -0.85
PTPN20-203ENST00000374342 A0A1B0GVX0 72 aa9.77□□□□□ -0.85
PTPN20-203ENST00000374342 ASB16-AS1Q495Z4 193 aa9.76□□□□□ -0.85
PTPN20-203ENST00000374342 C4orf48Q5BLP8 95 aa9.74□□□□□ -0.85
PTPN20-203ENST00000374342 LIMD2Q9BT23 127 aa9.74□□□□□ -0.85
PTPN20-203ENST00000374342 C8orf17Q9NRJ1 99 aa9.74□□□□□ -0.85
PTPN20-203ENST00000374342 SNURFQ9Y675 71 aa9.74□□□□□ -0.85
PTPN20-203ENST00000374342 hDV103S1A0JD37 113 aa9.72□□□□□ -0.85
PTPN20-203ENST00000374342 Q5XG85 94 aa9.72□□□□□ -0.85
PTPN20-203ENST00000374342 TMEM254Q8TBM7 123 aa9.72□□□□□ -0.85
PTPN20-203ENST00000374342 FAM229AH3BQW9 127 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms