RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 IGKV4-1P06312 121 aa9.94□□□□□ -0.82
CNKSR1-202ENST00000374253 C20orf197Q8N268 126 aa9.94□□□□□ -0.82
CNKSR1-202ENST00000374253 UBE2AP49459 152 aa9.93□□□□□ -0.82
CNKSR1-202ENST00000374253 IGFL1Q6UW32 110 aa9.93□□□□□ -0.82
CNKSR1-202ENST00000374253 A0A087WTM6 91 aa9.92□□□□□ -0.82
CNKSR1-202ENST00000374253 DEFB116Q30KQ4 102 aa9.91□□□□□ -0.82
CNKSR1-202ENST00000374253 DNAH17Q9UFH2 4485 aa9.9□□□□□ -0.82
CNKSR1-202ENST00000374253 SPRR4Q96PI1 79 aa9.89□□□□□ -0.83
CNKSR1-202ENST00000374253 DNAH8Q96JB1 4490 aa9.88□□□□□ -0.83
CNKSR1-202ENST00000374253 SNURFQ9Y675 71 aa9.88□□□□□ -0.83
CNKSR1-202ENST00000374253 TRAV7A0A075B6U4 112 aa9.87□□□□□ -0.83
CNKSR1-202ENST00000374253 SPACA4Q8TDM5 124 aa9.87□□□□□ -0.83
CNKSR1-202ENST00000374253 LINC00474Q9P2X8 69 aa9.87□□□□□ -0.83
CNKSR1-202ENST00000374253 DNAH6Q9C0G6 4158 aa9.86□□□□□ -0.83
CNKSR1-202ENST00000374253 RTL8CO15255 209 aa9.86□□□□□ -0.83
CNKSR1-202ENST00000374253 A0A087WSZ3 146 aa9.86□□□□□ -0.83
CNKSR1-202ENST00000374253 LY6G6CO95867 125 aa9.86□□□□□ -0.83
CNKSR1-202ENST00000374253 Q6ZR54 194 aa9.85□□□□□ -0.83
CNKSR1-202ENST00000374253 BCE1O60756 84 aa9.84□□□□□ -0.83
CNKSR1-202ENST00000374253 K7EQZ3 153 aa9.83□□□□□ -0.84
CNKSR1-202ENST00000374253 DSCR10P59022 87 aa9.83□□□□□ -0.84
CNKSR1-202ENST00000374253 H0Y9J4 135 aa9.81□□□□□ -0.84
CNKSR1-202ENST00000374253 PKIGQ9Y2B9 76 aa9.81□□□□□ -0.84
CNKSR1-202ENST00000374253 HYDINQ4G0P3 5121 aa9.8□□□□□ -0.84
CNKSR1-202ENST00000374253 A0A1B0GW54 56 aa9.8□□□□□ -0.84
CNKSR1-202ENST00000374253 KRTAP13-1Q8IUC0 172 aa9.8□□□□□ -0.84
CNKSR1-202ENST00000374253 IGLV8-61A0A075B6I0 122 aa9.79□□□□□ -0.84
CNKSR1-202ENST00000374253 C1orf134Q5TEV5 83 aa9.79□□□□□ -0.84
CNKSR1-202ENST00000374253 RPL37AP61513 92 aaKnown RBP9.78□□□□□ -0.84
CNKSR1-202ENST00000374253 FAM30AQ9NZY2 134 aa9.78□□□□□ -0.84
CNKSR1-202ENST00000374253 DNAH11Q96DT5 4516 aa9.78□□□□□ -0.84
CNKSR1-202ENST00000374253 IGLV5-52A0A0A0MRZ9 124 aa9.78□□□□□ -0.84
CNKSR1-202ENST00000374253 IGLV9-49A0A0B4J1Y8 123 aa9.78□□□□□ -0.84
CNKSR1-202ENST00000374253 DNAH5Q8TE73 4624 aa9.77□□□□□ -0.85
CNKSR1-202ENST00000374253 TMEM258P61165 79 aa9.77□□□□□ -0.85
CNKSR1-202ENST00000374253 C5orf47Q569G3 176 aa9.77□□□□□ -0.85
CNKSR1-202ENST00000374253 PSORS1C2Q9UIG4 136 aa9.77□□□□□ -0.85
CNKSR1-202ENST00000374253 SPRR1BP22528 89 aa9.76□□□□□ -0.85
CNKSR1-202ENST00000374253 ANAPC11Q9NYG5 84 aa9.76□□□□□ -0.85
CNKSR1-202ENST00000374253 OCR1Q9BZK8 76 aa9.75□□□□□ -0.85
CNKSR1-202ENST00000374253 H7BZZ5 65 aa9.74□□□□□ -0.85
CNKSR1-202ENST00000374253 HRCT1Q6UXD1 115 aa9.73□□□□□ -0.85
CNKSR1-202ENST00000374253 KLKP1Q107X0 134 aa9.72□□□□□ -0.85
CNKSR1-202ENST00000374253 TMEM254Q8TBM7 123 aa9.72□□□□□ -0.85
CNKSR1-202ENST00000374253 J3KT08 172 aa9.71□□□□□ -0.85
CNKSR1-202ENST00000374253 WFDC13Q8IUB5 93 aa9.71□□□□□ -0.85
CNKSR1-202ENST00000374253 PLAC8Q9NZF1 115 aa9.69□□□□□ -0.86
CNKSR1-202ENST00000374253 KRTAP10-2P60368 255 aa9.68□□□□□ -0.86
CNKSR1-202ENST00000374253 OXTP01178 125 aa9.68□□□□□ -0.86
CNKSR1-202ENST00000374253 ALMS1Q8TCU4 4167 aa9.67□□□□□ -0.86
CNKSR1-202ENST00000374253 HCG22E2RYF7 251 aa9.67□□□□□ -0.86
CNKSR1-202ENST00000374253 FAM236DA0A1B0GTK5 79 aa9.66□□□□□ -0.86
CNKSR1-202ENST00000374253 FAM236CP0DP71 79 aa9.66□□□□□ -0.86
CNKSR1-202ENST00000374253 RPS28P62857 69 aaKnown RBP9.66□□□□□ -0.86
CNKSR1-202ENST00000374253 MOBPQ13875 183 aa9.64□□□□□ -0.87
CNKSR1-202ENST00000374253 FAT2Q9NYQ8 4349 aa9.64□□□□□ -0.87
CNKSR1-202ENST00000374253 PKD1P98161 4303 aa9.63□□□□□ -0.87
CNKSR1-202ENST00000374253 LINC00472Q9H8W2 130 aa9.63□□□□□ -0.87
CNKSR1-202ENST00000374253 ZNF861PO60384 105 aa9.62□□□□□ -0.87
CNKSR1-202ENST00000374253 A0A0U1RQV1 116 aa9.61□□□□□ -0.87
CNKSR1-202ENST00000374253 LRP1BQ9NZR2 4599 aa9.61□□□□□ -0.87
CNKSR1-202ENST00000374253 SEC61GP60059 68 aa9.61□□□□□ -0.87
CNKSR1-202ENST00000374253 WWC2-AS2Q96NR7 200 aa9.61□□□□□ -0.87
CNKSR1-202ENST00000374253 LINC00483Q53H64 154 aa9.6□□□□□ -0.87
CNKSR1-202ENST00000374253 CIRBP-AS1Q8TBR5 109 aa9.59□□□□□ -0.87
CNKSR1-202ENST00000374253 PRR15Q8IV56 129 aa9.57□□□□□ -0.88
CNKSR1-202ENST00000374253 ZNF706Q9Y5V0 76 aaPredicted RBP9.57□□□□□ -0.88
CNKSR1-202ENST00000374253 A8MWP4 228 aa9.56□□□□□ -0.88
CNKSR1-202ENST00000374253 IGLV7-43P04211 117 aa9.56□□□□□ -0.88
CNKSR1-202ENST00000374253 CASC2Q6XLA1 102 aa9.55□□□□□ -0.88
CNKSR1-202ENST00000374253 NDUFC1O43677 76 aa9.54□□□□□ -0.88
CNKSR1-202ENST00000374253 Q96NJ1 140 aa9.54□□□□□ -0.88
CNKSR1-202ENST00000374253 KRTAP10-1P60331 282 aa9.53□□□□□ -0.88
CNKSR1-202ENST00000374253 KRTAP29-1A8MX34 341 aaPredicted RBP9.53□□□□□ -0.88
CNKSR1-202ENST00000374253 PKHD1P08F94 4074 aa9.52□□□□□ -0.89
CNKSR1-202ENST00000374253 LCE6AA0A183 80 aa9.5□□□□□ -0.89
CNKSR1-202ENST00000374253 VPS13BQ7Z7G8 4022 aa9.5□□□□□ -0.89
CNKSR1-202ENST00000374253 SACSQ9NZJ4 4579 aa9.49□□□□□ -0.89
CNKSR1-202ENST00000374253 MMP24-AS1A0A0U1RRL7 71 aa9.48□□□□□ -0.89
CNKSR1-202ENST00000374253 SERP1Q9Y6X1 66 aa9.48□□□□□ -0.89
CNKSR1-202ENST00000374253 NDUFB1O75438 58 aa9.47□□□□□ -0.89
CNKSR1-202ENST00000374253 PRR4Q16378 134 aa9.47□□□□□ -0.89
CNKSR1-202ENST00000374253 IGHV6-1A0A0B4J1U7 121 aa9.46□□□□□ -0.89
CNKSR1-202ENST00000374253 SPINK6Q6UWN8 80 aa9.46□□□□□ -0.89
CNKSR1-202ENST00000374253 ZCCHC13Q8WW36 166 aaKnown RBP9.45□□□□□ -0.9
CNKSR1-202ENST00000374253 LINC00208Q96KT6 92 aa9.45□□□□□ -0.9
CNKSR1-202ENST00000374253 hDV103S1A0JD37 113 aa9.44□□□□□ -0.9
CNKSR1-202ENST00000374253 A0A087X002 238 aa9.42□□□□□ -0.9
CNKSR1-202ENST00000374253 C4orf26Q17RF5 130 aa9.42□□□□□ -0.9
CNKSR1-202ENST00000374253 NOTCH2NLQ7Z3S9 236 aa9.42□□□□□ -0.9
CNKSR1-202ENST00000374253 H0Y9P7 68 aa9.42□□□□□ -0.9
CNKSR1-202ENST00000374253 MP68P56378 58 aa9.42□□□□□ -0.9
CNKSR1-202ENST00000374253 Q5XG85 94 aa9.41□□□□□ -0.9
CNKSR1-202ENST00000374253 Q6ZSA8 131 aa9.41□□□□□ -0.9
CNKSR1-202ENST00000374253 FAM229BQ4G0N7 80 aa9.4□□□□□ -0.91
CNKSR1-202ENST00000374253 C8orf17Q9NRJ1 99 aa9.39□□□□□ -0.91
CNKSR1-202ENST00000374253 CDK2AP2O75956 126 aa9.39□□□□□ -0.91
CNKSR1-202ENST00000374253 ATP5EP56381 51 aaPredicted RBP9.38□□□□□ -0.91
CNKSR1-202ENST00000374253 A0A1B0GVX0 72 aa9.38□□□□□ -0.91
CNKSR1-202ENST00000374253 KRTAP21-3Q3LHN1 58 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms