RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 EPPK1P58107 5090 aaKnown RBP9.18□□□□□ -0.94
HMGA1-203ENST00000374116 FAM229BQ4G0N7 80 aa9.17□□□□□ -0.94
HMGA1-203ENST00000374116 OCR1Q9BZK8 76 aa9.17□□□□□ -0.94
HMGA1-203ENST00000374116 KRTAP10-2P60368 255 aa9.16□□□□□ -0.94
HMGA1-203ENST00000374116 PKD1P98161 4303 aa9.16□□□□□ -0.94
HMGA1-203ENST00000374116 BIRC6Q9NR09 4857 aa9.16□□□□□ -0.94
HMGA1-203ENST00000374116 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.15□□□□□ -0.94
HMGA1-203ENST00000374116 A0A1B0GVY2 172 aa9.15□□□□□ -0.94
HMGA1-203ENST00000374116 PRR15Q8IV56 129 aa9.15□□□□□ -0.94
HMGA1-203ENST00000374116 PLA2G2DQ9UNK4 145 aa9.15□□□□□ -0.94
HMGA1-203ENST00000374116 HECTD4Q9Y4D8 3996 aa9.15□□□□□ -0.95
HMGA1-203ENST00000374116 NKAPP1Q8N9T2 125 aa9.15□□□□□ -0.95
HMGA1-203ENST00000374116 LINC00528Q8N1L1 170 aa9.14□□□□□ -0.95
HMGA1-203ENST00000374116 PKHD1P08F94 4074 aa9.13□□□□□ -0.95
HMGA1-203ENST00000374116 KCNQ1DNQ9H478 68 aa9.12□□□□□ -0.95
HMGA1-203ENST00000374116 IGKV4-1P06312 121 aa9.12□□□□□ -0.95
HMGA1-203ENST00000374116 SERTAD4-AS1Q5TG53 156 aa9.11□□□□□ -0.95
HMGA1-203ENST00000374116 DNAH11Q96DT5 4516 aa9.11□□□□□ -0.95
HMGA1-203ENST00000374116 IGLV5-37A0A075B6J1 123 aa9.1□□□□□ -0.95
HMGA1-203ENST00000374116 C7orf33Q8WU49 177 aa9.1□□□□□ -0.95
HMGA1-203ENST00000374116 Q1T7F1 81 aa9.09□□□□□ -0.95
HMGA1-203ENST00000374116 MPLKIPQ8TAP9 179 aa9.09□□□□□ -0.95
HMGA1-203ENST00000374116 hDV103S1A0JD37 113 aa9.08□□□□□ -0.96
HMGA1-203ENST00000374116 SCXQ7RTU7 201 aa9.08□□□□□ -0.96
HMGA1-203ENST00000374116 IGLV5-52A0A0A0MRZ9 124 aa9.05□□□□□ -0.96
HMGA1-203ENST00000374116 C16orf90A8MZG2 172 aa9.05□□□□□ -0.96
HMGA1-203ENST00000374116 IGLV1-50A0A075B6I6 118 aa9.04□□□□□ -0.96
HMGA1-203ENST00000374116 DNAH5Q8TE73 4624 aa9.04□□□□□ -0.96
HMGA1-203ENST00000374116 FAM168BA1KXE4 195 aa9.03□□□□□ -0.96
HMGA1-203ENST00000374116 PMAIP1Q13794 54 aa9.03□□□□□ -0.96
HMGA1-203ENST00000374116 DHRS4-AS1Q9P1J3 65 aa9.03□□□□□ -0.96
HMGA1-203ENST00000374116 A0A1B0GW54 56 aa9.03□□□□□ -0.96
HMGA1-203ENST00000374116 KRTAP7-1Q8IUC3 87 aa9.03□□□□□ -0.96
HMGA1-203ENST00000374116 SPRR1AP35321 89 aa9.02□□□□□ -0.97
HMGA1-203ENST00000374116 C14orf177Q52M58 125 aa9.02□□□□□ -0.97
HMGA1-203ENST00000374116 RPL37AP8A6NKH3 93 aa9.01□□□□□ -0.97
HMGA1-203ENST00000374116 KRTAP4-16G5E9R7 235 aaPredicted RBP9.01□□□□□ -0.97
HMGA1-203ENST00000374116 CNBPP62633 177 aaKnown RBP9.01□□□□□ -0.97
HMGA1-203ENST00000374116 Q6ZRX8 168 aa9.01□□□□□ -0.97
HMGA1-203ENST00000374116 KRTAP10-1P60331 282 aa9.01□□□□□ -0.97
HMGA1-203ENST00000374116 MRPL55Q7Z7F7 128 aaKnown RBP9.01□□□□□ -0.97
HMGA1-203ENST00000374116 ZCCHC13Q8WW36 166 aaKnown RBP9.01□□□□□ -0.97
HMGA1-203ENST00000374116 HIGD2AQ9BW72 106 aa9.01□□□□□ -0.97
HMGA1-203ENST00000374116 ETDCA0A1B0GVM5 59 aa9□□□□□ -0.97
HMGA1-203ENST00000374116 CYP4F30PQ9H0H9 118 aa8.99□□□□□ -0.97
HMGA1-203ENST00000374116 FAM30AQ9NZY2 134 aa8.97□□□□□ -0.97
HMGA1-203ENST00000374116 Q8N377 158 aa8.96□□□□□ -0.97
HMGA1-203ENST00000374116 Q8N9L7 120 aa8.96□□□□□ -0.97
HMGA1-203ENST00000374116 Q9BRP9 147 aa8.96□□□□□ -0.97
HMGA1-203ENST00000374116 C9orf163Q8N9P6 203 aa8.96□□□□□ -0.98
HMGA1-203ENST00000374116 DYNC1H1Q14204 4646 aaKnown RBP8.96□□□□□ -0.98
HMGA1-203ENST00000374116 LRP1BQ9NZR2 4599 aa8.95□□□□□ -0.98
HMGA1-203ENST00000374116 DEFB105AQ8NG35 78 aa8.95□□□□□ -0.98
HMGA1-203ENST00000374116 C1orf64Q8NEQ6 169 aa8.94□□□□□ -0.98
HMGA1-203ENST00000374116 KRTAP17-1Q9BYP8 105 aa8.94□□□□□ -0.98
HMGA1-203ENST00000374116 IGLV5-48A0A075B6I7 105 aa8.94□□□□□ -0.98
HMGA1-203ENST00000374116 REG3GQ6UW15 175 aa8.94□□□□□ -0.98
HMGA1-203ENST00000374116 A0A096LNI7 61 aa8.93□□□□□ -0.98
HMGA1-203ENST00000374116 PANO1I0J062 215 aa8.93□□□□□ -0.98
HMGA1-203ENST00000374116 CHTF8P0CG12 524 aa8.93□□□□□ -0.98
HMGA1-203ENST00000374116 CD164Q04900 197 aa8.91□□□□□ -0.98
HMGA1-203ENST00000374116 SMIM29Q86T20 159 aa8.91□□□□□ -0.98
HMGA1-203ENST00000374116 IGKV2-24A0A0C4DH68 120 aa8.91□□□□□ -0.98
HMGA1-203ENST00000374116 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.91□□□□□ -0.98
HMGA1-203ENST00000374116 UBE2BP63146 152 aa8.9□□□□□ -0.98
HMGA1-203ENST00000374116 TRAV22A0A0B4J277 110 aa8.89□□□□□ -0.99
HMGA1-203ENST00000374116 A0A1W2PNN7 141 aa8.88□□□□□ -0.99
HMGA1-203ENST00000374116 ST20-AS1Q8NBB2 130 aa8.88□□□□□ -0.99
HMGA1-203ENST00000374116 KIAA1109Q2LD37 5005 aa8.87□□□□□ -0.99
HMGA1-203ENST00000374116 NDUFB1O75438 58 aa8.86□□□□□ -0.99
HMGA1-203ENST00000374116 Q6ZSA8 131 aa8.85□□□□□ -0.99
HMGA1-203ENST00000374116 SMR3BP02814 79 aaPredicted RBP8.84□□□□□ -0.99
HMGA1-203ENST00000374116 C1orf137Q5JT78 98 aa8.84□□□□□ -0.99
HMGA1-203ENST00000374116 CIRBP-AS1Q8TBR5 109 aa8.84□□□□□ -0.99
HMGA1-203ENST00000374116 APOBP04114 4563 aaKnown RBP8.84□□□□□ -1
HMGA1-203ENST00000374116 SPACA4Q8TDM5 124 aa8.82□□□□□ -1
HMGA1-203ENST00000374116 A0A1W2PNM2 257 aa8.82□□□□□ -1
HMGA1-203ENST00000374116 SPRR4Q96PI1 79 aa8.82□□□□□ -1
HMGA1-203ENST00000374116 Q8NBF4 154 aa8.81□□□□□ -1
HMGA1-203ENST00000374116 DNAH8Q96JB1 4490 aa8.81□□□□□ -1
HMGA1-203ENST00000374116 PSPHP1O15172 72 aa8.8□□□□□ -1
HMGA1-203ENST00000374116 CDK2AP2O75956 126 aa8.8□□□□□ -1
HMGA1-203ENST00000374116 RYR1P21817 5038 aa8.8□□□□□ -1
HMGA1-203ENST00000374116 DSCR10P59022 87 aa8.8□□□□□ -1
HMGA1-203ENST00000374116 Q5VV11 94 aa8.8□□□□□ -1
HMGA1-203ENST00000374116 HERC2O95714 4834 aa8.79□□□□□ -1
HMGA1-203ENST00000374116 H0Y9J4 135 aa8.79□□□□□ -1
HMGA1-203ENST00000374116 PRLHP81277 87 aa8.79□□□□□ -1
HMGA1-203ENST00000374116 PHF5AQ7RTV0 110 aaKnown RBP8.79□□□□□ -1
HMGA1-203ENST00000374116 HSPG2P98160 4391 aa8.79□□□□□ -1
HMGA1-203ENST00000374116 UBE2AP49459 152 aa8.78□□□□□ -1
HMGA1-203ENST00000374116 SPANXA2-OT1Q8N9U9 137 aa8.78□□□□□ -1
HMGA1-203ENST00000374116 KRTAP11-1Q8IUC1 163 aa8.77□□□□□ -1
HMGA1-203ENST00000374116 A8MUN3 132 aa8.77□□□□□ -1.01
HMGA1-203ENST00000374116 LIMD2Q9BT23 127 aa8.77□□□□□ -1.01
HMGA1-203ENST00000374116 KTN1-AS1Q86SY8 53 aa8.76□□□□□ -1.01
HMGA1-203ENST00000374116 HCG22E2RYF7 251 aa8.75□□□□□ -1.01
HMGA1-203ENST00000374116 IGLV8-61A0A075B6I0 122 aa8.75□□□□□ -1.01
HMGA1-203ENST00000374116 H3BPC8 53 aa8.75□□□□□ -1.01
HMGA1-203ENST00000374116 PLAC8Q9NZF1 115 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms