RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 WFDC13Q8IUB5 93 aa6.14□□□□□ -1.43
SF3A3-201ENST00000373019 TRRAPQ9Y4A5 3859 aa6.14□□□□□ -1.43
SF3A3-201ENST00000373019 IGKV2D-24A0A075B6R9 120 aa6.13□□□□□ -1.43
SF3A3-201ENST00000373019 COA5Q86WW8 74 aa6.13□□□□□ -1.43
SF3A3-201ENST00000373019 C7orf33Q8WU49 177 aa6.13□□□□□ -1.43
SF3A3-201ENST00000373019 PRR34Q9NV39 138 aa6.13□□□□□ -1.43
SF3A3-201ENST00000373019 KRTAP29-1A8MX34 341 aaPredicted RBP6.12□□□□□ -1.43
SF3A3-201ENST00000373019 DNHD1Q96M86 4753 aa6.11□□□□□ -1.43
SF3A3-201ENST00000373019 SPINK7P58062 85 aa6.11□□□□□ -1.43
SF3A3-201ENST00000373019 H0Y9P7 68 aa6.11□□□□□ -1.43
SF3A3-201ENST00000373019 LINC00313P59037 77 aa6.11□□□□□ -1.43
SF3A3-201ENST00000373019 KRTAP10-3P60369 221 aa6.11□□□□□ -1.43
SF3A3-201ENST00000373019 WFDC10BQ8IUB3 73 aa6.11□□□□□ -1.43
SF3A3-201ENST00000373019 NKAPP1Q8N9T2 125 aa6.1□□□□□ -1.43
SF3A3-201ENST00000373019 LINC01558Q9Y6Z2 57 aa6.1□□□□□ -1.43
SF3A3-201ENST00000373019 PRAC1Q96KF2 57 aa6.1□□□□□ -1.43
SF3A3-201ENST00000373019 A0A0G2JQZ4 141 aa6.09□□□□□ -1.43
SF3A3-201ENST00000373019 A0A1W2PNN7 141 aa6.09□□□□□ -1.43
SF3A3-201ENST00000373019 CSMD3Q7Z407 3707 aa6.09□□□□□ -1.43
SF3A3-201ENST00000373019 H3BPC8 53 aa6.08□□□□□ -1.44
SF3A3-201ENST00000373019 EGFEM1PQ0D2K5 195 aa6.08□□□□□ -1.44
SF3A3-201ENST00000373019 SPAG11AQ6PDA7 123 aa6.08□□□□□ -1.44
SF3A3-201ENST00000373019 KRTAP4-16G5E9R7 235 aaPredicted RBP6.08□□□□□ -1.44
SF3A3-201ENST00000373019 CAMK2N2Q96S95 79 aa6.08□□□□□ -1.44
SF3A3-201ENST00000373019 IGLV7-46A0A075B6I9 117 aa6.07□□□□□ -1.44
SF3A3-201ENST00000373019 Q6ZRX8 168 aa6.07□□□□□ -1.44
SF3A3-201ENST00000373019 X6R8D5 127 aa6.07□□□□□ -1.44
SF3A3-201ENST00000373019 RPL37AP61513 92 aaKnown RBP6.07□□□□□ -1.44
SF3A3-201ENST00000373019 ADM2Q7Z4H4 148 aa6.07□□□□□ -1.44
SF3A3-201ENST00000373019 CNBPP62633 177 aaKnown RBP6.06□□□□□ -1.44
SF3A3-201ENST00000373019 SERTAD4-AS1Q5TG53 156 aa6.06□□□□□ -1.44
SF3A3-201ENST00000373019 CMC4P56277 68 aaPredicted RBP6.05□□□□□ -1.44
SF3A3-201ENST00000373019 DHRS4-AS1Q9P1J3 65 aa6.05□□□□□ -1.44
SF3A3-201ENST00000373019 IGLV1-51P01701 117 aa6.04□□□□□ -1.44
SF3A3-201ENST00000373019 LINC01554Q52M75 96 aa6.04□□□□□ -1.44
SF3A3-201ENST00000373019 KRTAP26-1Q6PEX3 210 aa6.04□□□□□ -1.44
SF3A3-201ENST00000373019 C15orf56Q8N910 161 aa6.03□□□□□ -1.44
SF3A3-201ENST00000373019 IGLV1-50A0A075B6I6 118 aa6.03□□□□□ -1.44
SF3A3-201ENST00000373019 LELP1Q5T871 98 aa6.03□□□□□ -1.44
SF3A3-201ENST00000373019 LINC00476Q8WZB0 136 aa6.03□□□□□ -1.44
SF3A3-201ENST00000373019 Q8NAQ8 132 aa6.03□□□□□ -1.44
SF3A3-201ENST00000373019 DEFB4AO15263 64 aa6.02□□□□□ -1.45
SF3A3-201ENST00000373019 IGLV5-37A0A075B6J1 123 aa6.02□□□□□ -1.45
SF3A3-201ENST00000373019 RPL37AP8A6NKH3 93 aa6.02□□□□□ -1.45
SF3A3-201ENST00000373019 CASC2Q6XLA1 102 aa6.02□□□□□ -1.45
SF3A3-201ENST00000373019 SPRR1AP35321 89 aa6.01□□□□□ -1.45
SF3A3-201ENST00000373019 IGFL1Q6UW32 110 aa6.01□□□□□ -1.45
SF3A3-201ENST00000373019 STAB2Q8WWQ8 2551 aa6.01□□□□□ -1.45
SF3A3-201ENST00000373019 TENM2Q9NT68 2774 aa6.01□□□□□ -1.45
SF3A3-201ENST00000373019 PLA2G1BP04054 148 aaKnown RBP6.01□□□□□ -1.45
SF3A3-201ENST00000373019 A0A087WSZ3 146 aa6□□□□□ -1.45
SF3A3-201ENST00000373019 PCOTHQ58A44 107 aa5.98□□□□□ -1.45
SF3A3-201ENST00000373019 FBN3Q75N90 2809 aa5.98□□□□□ -1.45
SF3A3-201ENST00000373019 FAM168BA1KXE4 195 aa5.97□□□□□ -1.45
SF3A3-201ENST00000373019 KRTAP7-1Q8IUC3 87 aa5.97□□□□□ -1.45
SF3A3-201ENST00000373019 HRES1P13985 223 aa5.97□□□□□ -1.45
SF3A3-201ENST00000373019 SRRM2Q9UQ35 2752 aaKnown RBP5.96□□□□□ -1.46
SF3A3-201ENST00000373019 A8MWP4 228 aa5.94□□□□□ -1.46
SF3A3-201ENST00000373019 RTL8CO15255 209 aa5.93□□□□□ -1.46
SF3A3-201ENST00000373019 LINC00472Q9H8W2 130 aa5.93□□□□□ -1.46
SF3A3-201ENST00000373019 PLA2G2DQ9UNK4 145 aa5.93□□□□□ -1.46
SF3A3-201ENST00000373019 IGLV8-61A0A075B6I0 122 aa5.93□□□□□ -1.46
SF3A3-201ENST00000373019 MMP24-AS1A0A0U1RRL7 71 aa5.92□□□□□ -1.46
SF3A3-201ENST00000373019 HTN3P15516 51 aa5.92□□□□□ -1.46
SF3A3-201ENST00000373019 ALMS1Q8TCU4 4167 aa5.92□□□□□ -1.46
SF3A3-201ENST00000373019 DEFB135Q30KP9 77 aa5.92□□□□□ -1.46
SF3A3-201ENST00000373019 KRTAP10-11P60412 298 aa5.91□□□□□ -1.46
SF3A3-201ENST00000373019 IGKV2-24A0A0C4DH68 120 aa5.89□□□□□ -1.47
SF3A3-201ENST00000373019 ASB16-AS1Q495Z4 193 aa5.89□□□□□ -1.47
SF3A3-201ENST00000373019 TENM3Q9P273 2699 aa5.89□□□□□ -1.47
SF3A3-201ENST00000373019 TLX1NBP0CAT3 122 aa5.89□□□□□ -1.47
SF3A3-201ENST00000373019 K7EIL1 84 aa5.88□□□□□ -1.47
SF3A3-201ENST00000373019 Q6ZR54 194 aa5.88□□□□□ -1.47
SF3A3-201ENST00000373019 ZNF706Q9Y5V0 76 aaPredicted RBP5.88□□□□□ -1.47
SF3A3-201ENST00000373019 MEGF8Q7Z7M0 2845 aa5.88□□□□□ -1.47
SF3A3-201ENST00000373019 A0A087X002 238 aa5.86□□□□□ -1.47
SF3A3-201ENST00000373019 REG3GQ6UW15 175 aa5.85□□□□□ -1.47
SF3A3-201ENST00000373019 H0Y9J4 135 aa5.85□□□□□ -1.47
SF3A3-201ENST00000373019 DNAH1Q9P2D7 4330 aa5.84□□□□□ -1.48
SF3A3-201ENST00000373019 DEFB131BA0A096LNP1 70 aa5.84□□□□□ -1.48
SF3A3-201ENST00000373019 SPART-AS1P0CW21 52 aa5.84□□□□□ -1.48
SF3A3-201ENST00000373019 CSAG1Q6PB30 78 aa5.84□□□□□ -1.48
SF3A3-201ENST00000373019 TP53AIP1Q9HCN2 124 aa5.83□□□□□ -1.48
SF3A3-201ENST00000373019 PRLHP81277 87 aa5.83□□□□□ -1.48
SF3A3-201ENST00000373019 SPATA8Q6RVD6 105 aa5.83□□□□□ -1.48
SF3A3-201ENST00000373019 RETNLBQ9BQ08 111 aa5.82□□□□□ -1.48
SF3A3-201ENST00000373019 Q96NJ1 140 aa5.8□□□□□ -1.48
SF3A3-201ENST00000373019 CASC10Q5T4H9 136 aa5.78□□□□□ -1.48
SF3A3-201ENST00000373019 LYSTQ99698 3801 aa5.77□□□□□ -1.49
SF3A3-201ENST00000373019 LINC01556Q5JQF7 62 aa5.77□□□□□ -1.49
SF3A3-201ENST00000373019 C8orf17Q9NRJ1 99 aa5.76□□□□□ -1.49
SF3A3-201ENST00000373019 WWC2-AS2Q96NR7 200 aa5.76□□□□□ -1.49
SF3A3-201ENST00000373019 COL7A1Q02388 2944 aa5.75□□□□□ -1.49
SF3A3-201ENST00000373019 SPRR1BP22528 89 aa5.75□□□□□ -1.49
SF3A3-201ENST00000373019 ANK2Q01484 3957 aa5.74□□□□□ -1.49
SF3A3-201ENST00000373019 H3BNG1 76 aa5.74□□□□□ -1.49
SF3A3-201ENST00000373019 A0A096LNI7 61 aa5.74□□□□□ -1.49
SF3A3-201ENST00000373019 MIR22HGQ0VDD5 57 aa5.73□□□□□ -1.49
SF3A3-201ENST00000373019 A0A1B0GU69 56 aa5.73□□□□□ -1.49
SF3A3-201ENST00000373019 A0A0A0MQY5 61 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms