RNA–Protein interactions for RNA: ENST00000372447.7

C9orf78-201, Transcript of chromosome 9 open reading frame 78, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf78, Length 1,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-201ENST00000372447 UBE2BP63146 152 aa10□□□□□ -0.81
C9orf78-201ENST00000372447 ANAPC13Q9BS18 74 aa9.99□□□□□ -0.81
C9orf78-201ENST00000372447 UBL5Q9BZL1 73 aa9.99□□□□□ -0.81
C9orf78-201ENST00000372447 IGKV3D-7A0A0C4DH55 119 aa9.98□□□□□ -0.81
C9orf78-201ENST00000372447 ST20-AS1Q8NBB2 130 aa9.98□□□□□ -0.81
C9orf78-201ENST00000372447 IGLV5-48A0A075B6I7 105 aa9.97□□□□□ -0.81
C9orf78-201ENST00000372447 ERC2-IT1O76042 136 aa9.97□□□□□ -0.81
C9orf78-201ENST00000372447 PHF5AQ7RTV0 110 aaKnown RBP9.97□□□□□ -0.81
C9orf78-201ENST00000372447 PLAC8Q9NZF1 115 aa9.96□□□□□ -0.81
C9orf78-201ENST00000372447 FAT1Q14517 4588 aa9.96□□□□□ -0.82
C9orf78-201ENST00000372447 FAM19A1Q7Z5A9 133 aa9.96□□□□□ -0.82
C9orf78-201ENST00000372447 ATP5EP2Q5VTU8 51 aa9.95□□□□□ -0.82
C9orf78-201ENST00000372447 FAM236AA0A1B0GUQ0 79 aa9.94□□□□□ -0.82
C9orf78-201ENST00000372447 FAM236BA0A1B0GV22 79 aa9.94□□□□□ -0.82
C9orf78-201ENST00000372447 EPM2AB3EWF7 344 aa9.93□□□□□ -0.82
C9orf78-201ENST00000372447 SMR3BP02814 79 aaPredicted RBP9.93□□□□□ -0.82
C9orf78-201ENST00000372447 PRLHP81277 87 aa9.93□□□□□ -0.82
C9orf78-201ENST00000372447 KRTAP11-1Q8IUC1 163 aa9.93□□□□□ -0.82
C9orf78-201ENST00000372447 C3orf22Q8N5N4 141 aa9.93□□□□□ -0.82
C9orf78-201ENST00000372447 Q6ZVQ6 151 aa9.91□□□□□ -0.82
C9orf78-201ENST00000372447 KRTAP17-1Q9BYP8 105 aa9.9□□□□□ -0.82
C9orf78-201ENST00000372447 HERC2O95714 4834 aa9.89□□□□□ -0.83
C9orf78-201ENST00000372447 HIGD2AQ9BW72 106 aa9.88□□□□□ -0.83
C9orf78-201ENST00000372447 H0Y9J4 135 aa9.88□□□□□ -0.83
C9orf78-201ENST00000372447 HIST1H4AP62805 103 aaKnown RBP9.87□□□□□ -0.83
C9orf78-201ENST00000372447 A0A087WVE0 104 aa9.86□□□□□ -0.83
C9orf78-201ENST00000372447 SMIM29Q86T20 159 aa9.86□□□□□ -0.83
C9orf78-201ENST00000372447 C1orf137Q5JT78 98 aa9.86□□□□□ -0.83
C9orf78-201ENST00000372447 VPS13BQ7Z7G8 4022 aa9.84□□□□□ -0.83
C9orf78-201ENST00000372447 Q8N1X5 172 aa9.84□□□□□ -0.83
C9orf78-201ENST00000372447 UBE2AP49459 152 aa9.83□□□□□ -0.84
C9orf78-201ENST00000372447 CXCL6P80162 114 aa9.83□□□□□ -0.84
C9orf78-201ENST00000372447 BCE1O60756 84 aa9.83□□□□□ -0.84
C9orf78-201ENST00000372447 A0A1B0GW54 56 aa9.82□□□□□ -0.84
C9orf78-201ENST00000372447 F8WEM9 126 aa9.82□□□□□ -0.84
C9orf78-201ENST00000372447 A0A1W2PNM2 257 aa9.81□□□□□ -0.84
C9orf78-201ENST00000372447 FAM229AH3BQW9 127 aa9.8□□□□□ -0.84
C9orf78-201ENST00000372447 ATOX1O00244 68 aa9.8□□□□□ -0.84
C9orf78-201ENST00000372447 NREPQ16612 68 aa9.8□□□□□ -0.84
C9orf78-201ENST00000372447 Q5VSD8 79 aa9.8□□□□□ -0.84
C9orf78-201ENST00000372447 Q8NBF4 154 aa9.8□□□□□ -0.84
C9orf78-201ENST00000372447 CCDC179H3BU77 68 aa9.79□□□□□ -0.84
C9orf78-201ENST00000372447 KRTAP13-1Q8IUC0 172 aa9.79□□□□□ -0.84
C9orf78-201ENST00000372447 SPRR1BP22528 89 aa9.78□□□□□ -0.84
C9orf78-201ENST00000372447 SPRR4Q96PI1 79 aa9.78□□□□□ -0.84
C9orf78-201ENST00000372447 IGLV8-61A0A075B6I0 122 aa9.77□□□□□ -0.85
C9orf78-201ENST00000372447 RPL37AP61513 92 aaKnown RBP9.77□□□□□ -0.85
C9orf78-201ENST00000372447 KRTAP10-4P60372 401 aaPredicted RBP9.76□□□□□ -0.85
C9orf78-201ENST00000372447 KRTAP4-5Q9BYR2 181 aa9.76□□□□□ -0.85
C9orf78-201ENST00000372447 PSORS1C2Q9UIG4 136 aa9.76□□□□□ -0.85
C9orf78-201ENST00000372447 PLA2G1BP04054 148 aaKnown RBP9.75□□□□□ -0.85
C9orf78-201ENST00000372447 IGFL1Q6UW32 110 aa9.75□□□□□ -0.85
C9orf78-201ENST00000372447 SRRM2Q9UQ35 2752 aaKnown RBP9.74□□□□□ -0.85
C9orf78-201ENST00000372447 CRYGAP11844 174 aa9.73□□□□□ -0.85
C9orf78-201ENST00000372447 BPY2O14599 106 aa9.71□□□□□ -0.85
C9orf78-201ENST00000372447 A0A0G2JQZ4 141 aa9.7□□□□□ -0.86
C9orf78-201ENST00000372447 UQCRQO14949 82 aa9.7□□□□□ -0.86
C9orf78-201ENST00000372447 COX7CP15954 63 aa9.7□□□□□ -0.86
C9orf78-201ENST00000372447 ABCA13Q86UQ4 5058 aa9.69□□□□□ -0.86
C9orf78-201ENST00000372447 SERP2Q8N6R1 65 aa9.68□□□□□ -0.86
C9orf78-201ENST00000372447 IGLV7-43P04211 117 aa9.66□□□□□ -0.86
C9orf78-201ENST00000372447 IGKV4-1P06312 121 aa9.65□□□□□ -0.86
C9orf78-201ENST00000372447 Q8N9L7 120 aa9.65□□□□□ -0.86
C9orf78-201ENST00000372447 ZNF861PO60384 105 aa9.63□□□□□ -0.87
C9orf78-201ENST00000372447 LINC00483Q53H64 154 aa9.63□□□□□ -0.87
C9orf78-201ENST00000372447 C9orf153Q5TBE3 101 aa9.63□□□□□ -0.87
C9orf78-201ENST00000372447 ZNF706Q9Y5V0 76 aaPredicted RBP9.63□□□□□ -0.87
C9orf78-201ENST00000372447 A0A087WSZ3 146 aa9.62□□□□□ -0.87
C9orf78-201ENST00000372447 PKHD1L1Q86WI1 4243 aa9.6□□□□□ -0.87
C9orf78-201ENST00000372447 SPINK6Q6UWN8 80 aa9.59□□□□□ -0.87
C9orf78-201ENST00000372447 SMIM20Q8N5G0 67 aa9.59□□□□□ -0.87
C9orf78-201ENST00000372447 DSCR10P59022 87 aa9.58□□□□□ -0.88
C9orf78-201ENST00000372447 FLG2Q5D862 2391 aaPredicted RBP9.58□□□□□ -0.88
C9orf78-201ENST00000372447 IGLV9-49A0A0B4J1Y8 123 aa9.58□□□□□ -0.88
C9orf78-201ENST00000372447 TRAV7A0A075B6U4 112 aa9.57□□□□□ -0.88
C9orf78-201ENST00000372447 MYCBP2O75592 4640 aa9.56□□□□□ -0.88
C9orf78-201ENST00000372447 PCLOQ9Y6V0 5065 aa9.56□□□□□ -0.88
C9orf78-201ENST00000372447 LRP1Q07954 4544 aaKnown RBP9.55□□□□□ -0.88
C9orf78-201ENST00000372447 K7EQZ3 153 aa9.53□□□□□ -0.88
C9orf78-201ENST00000372447 SS18L2Q9UHA2 77 aa9.53□□□□□ -0.88
C9orf78-201ENST00000372447 DEFB116Q30KQ4 102 aa9.52□□□□□ -0.88
C9orf78-201ENST00000372447 ANAPC11Q9NYG5 84 aa9.52□□□□□ -0.89
C9orf78-201ENST00000372447 FAT3Q8TDW7 4589 aa9.51□□□□□ -0.89
C9orf78-201ENST00000372447 MOBPQ13875 183 aa9.5□□□□□ -0.89
C9orf78-201ENST00000372447 CYSTM1Q9H1C7 97 aa9.49□□□□□ -0.89
C9orf78-201ENST00000372447 LINC00472Q9H8W2 130 aa9.49□□□□□ -0.89
C9orf78-201ENST00000372447 SVIPQ8NHG7 77 aa9.48□□□□□ -0.89
C9orf78-201ENST00000372447 C20orf197Q8N268 126 aa9.47□□□□□ -0.89
C9orf78-201ENST00000372447 KRTAP1-4P0C5Y4 121 aa9.46□□□□□ -0.9
C9orf78-201ENST00000372447 OCR1Q9BZK8 76 aa9.46□□□□□ -0.9
C9orf78-201ENST00000372447 HRCT1Q6UXD1 115 aa9.45□□□□□ -0.9
C9orf78-201ENST00000372447 HCG22E2RYF7 251 aa9.44□□□□□ -0.9
C9orf78-201ENST00000372447 A8MWP4 228 aa9.42□□□□□ -0.9
C9orf78-201ENST00000372447 KRTAP29-1A8MX34 341 aaPredicted RBP9.41□□□□□ -0.9
C9orf78-201ENST00000372447 J3KT08 172 aa9.41□□□□□ -0.9
C9orf78-201ENST00000372447 OXTP01178 125 aa9.41□□□□□ -0.9
C9orf78-201ENST00000372447 PRR15Q8IV56 129 aa9.41□□□□□ -0.9
C9orf78-201ENST00000372447 KLKP1Q107X0 134 aa9.4□□□□□ -0.9
C9orf78-201ENST00000372447 TMEM258P61165 79 aa9.39□□□□□ -0.91
C9orf78-201ENST00000372447 Q96NJ1 140 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms