RNA–Protein interactions for RNA: ENST00000371746.7

LHX3-201, Transcript of LIM homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LHX3, Length 2,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3-201ENST00000371746 SMIM20Q8N5G0 67 aa14.65□□□□□ -0.06
LHX3-201ENST00000371746 F8WEM9 126 aa14.65□□□□□ -0.06
LHX3-201ENST00000371746 Q8NBF4 154 aa14.63□□□□□ -0.07
LHX3-201ENST00000371746 DNAH6Q9C0G6 4158 aa14.63□□□□□ -0.07
LHX3-201ENST00000371746 KRTAP13-1Q8IUC0 172 aa14.63□□□□□ -0.07
LHX3-201ENST00000371746 CXCL6P80162 114 aa14.62□□□□□ -0.07
LHX3-201ENST00000371746 NREPQ16612 68 aa14.62□□□□□ -0.07
LHX3-201ENST00000371746 HYDINQ4G0P3 5121 aa14.6□□□□□ -0.07
LHX3-201ENST00000371746 ALMS1Q8TCU4 4167 aa14.6□□□□□ -0.07
LHX3-201ENST00000371746 PLAC8Q9NZF1 115 aa14.6□□□□□ -0.07
LHX3-201ENST00000371746 KRTAP10-2P60368 255 aa14.58□□□□□ -0.07
LHX3-201ENST00000371746 IGFL1Q6UW32 110 aa14.58□□□□□ -0.07
LHX3-201ENST00000371746 FRAS1Q86XX4 4008 aa14.58□□□□□ -0.08
LHX3-201ENST00000371746 ATOX1O00244 68 aa14.57□□□□□ -0.08
LHX3-201ENST00000371746 SPRR4Q96PI1 79 aa14.56□□□□□ -0.08
LHX3-201ENST00000371746 PSORS1C2Q9UIG4 136 aa14.56□□□□□ -0.08
LHX3-201ENST00000371746 DNAH8Q96JB1 4490 aa14.55□□□□□ -0.08
LHX3-201ENST00000371746 C9orf153Q5TBE3 101 aa14.55□□□□□ -0.08
LHX3-201ENST00000371746 SPRR1BP22528 89 aa14.54□□□□□ -0.08
LHX3-201ENST00000371746 Q8N9L7 120 aa14.54□□□□□ -0.08
LHX3-201ENST00000371746 IGLV8-61A0A075B6I0 122 aa14.53□□□□□ -0.08
LHX3-201ENST00000371746 UQCRQO14949 82 aa14.53□□□□□ -0.08
LHX3-201ENST00000371746 DNAH11Q96DT5 4516 aa14.52□□□□□ -0.09
LHX3-201ENST00000371746 A0A1B0GW54 56 aa14.52□□□□□ -0.09
LHX3-201ENST00000371746 CRYGAP11844 174 aa14.51□□□□□ -0.09
LHX3-201ENST00000371746 DNAH5Q8TE73 4624 aa14.5□□□□□ -0.09
LHX3-201ENST00000371746 BPY2O14599 106 aa14.5□□□□□ -0.09
LHX3-201ENST00000371746 FAM30AQ9NZY2 134 aa14.49□□□□□ -0.09
LHX3-201ENST00000371746 FAT2Q9NYQ8 4349 aa14.47□□□□□ -0.09
LHX3-201ENST00000371746 COX7CP15954 63 aa14.46□□□□□ -0.09
LHX3-201ENST00000371746 A0A087WSZ3 146 aa14.43□□□□□ -0.1
LHX3-201ENST00000371746 IGKV4-1P06312 121 aa14.43□□□□□ -0.1
LHX3-201ENST00000371746 SERP2Q8N6R1 65 aa14.42□□□□□ -0.1
LHX3-201ENST00000371746 CIRBP-AS1Q8TBR5 109 aa14.42□□□□□ -0.1
LHX3-201ENST00000371746 PKD1P98161 4303 aa14.41□□□□□ -0.1
LHX3-201ENST00000371746 ZNF861PO60384 105 aa14.4□□□□□ -0.1
LHX3-201ENST00000371746 IGLV9-49A0A0B4J1Y8 123 aa14.39□□□□□ -0.11
LHX3-201ENST00000371746 KRTAP10-1P60331 282 aa14.37□□□□□ -0.11
LHX3-201ENST00000371746 ANAPC11Q9NYG5 84 aa14.36□□□□□ -0.11
LHX3-201ENST00000371746 DEFB116Q30KQ4 102 aa14.35□□□□□ -0.11
LHX3-201ENST00000371746 LINC00483Q53H64 154 aa14.35□□□□□ -0.11
LHX3-201ENST00000371746 DSCR10P59022 87 aa14.34□□□□□ -0.11
LHX3-201ENST00000371746 ZNF706Q9Y5V0 76 aaPredicted RBP14.32□□□□□ -0.12
LHX3-201ENST00000371746 SACSQ9NZJ4 4579 aa14.32□□□□□ -0.12
LHX3-201ENST00000371746 IGLV7-43P04211 117 aa14.32□□□□□ -0.12
LHX3-201ENST00000371746 CYSTM1Q9H1C7 97 aa14.32□□□□□ -0.12
LHX3-201ENST00000371746 Q6ZSA8 131 aa14.31□□□□□ -0.12
LHX3-201ENST00000371746 K7EQZ3 153 aa14.3□□□□□ -0.12
LHX3-201ENST00000371746 LRP1BQ9NZR2 4599 aa14.26□□□□□ -0.13
LHX3-201ENST00000371746 MOBPQ13875 183 aa14.25□□□□□ -0.13
LHX3-201ENST00000371746 TRAV7A0A075B6U4 112 aa14.24□□□□□ -0.13
LHX3-201ENST00000371746 PKHD1P08F94 4074 aa14.24□□□□□ -0.13
LHX3-201ENST00000371746 HRCT1Q6UXD1 115 aa14.22□□□□□ -0.13
LHX3-201ENST00000371746 J3KT08 172 aa14.21□□□□□ -0.14
LHX3-201ENST00000371746 RPL37AP61513 92 aaKnown RBP14.2□□□□□ -0.14
LHX3-201ENST00000371746 C20orf197Q8N268 126 aa14.18□□□□□ -0.14
LHX3-201ENST00000371746 LINC00472Q9H8W2 130 aa14.17□□□□□ -0.14
LHX3-201ENST00000371746 LCE6AA0A183 80 aa14.16□□□□□ -0.14
LHX3-201ENST00000371746 TMEM258P61165 79 aa14.14□□□□□ -0.15
LHX3-201ENST00000371746 OCR1Q9BZK8 76 aa14.12□□□□□ -0.15
LHX3-201ENST00000371746 RPS28P62857 69 aaKnown RBP14.12□□□□□ -0.15
LHX3-201ENST00000371746 HCG22E2RYF7 251 aa14.1□□□□□ -0.15
LHX3-201ENST00000371746 VPS13BQ7Z7G8 4022 aa14.08□□□□□ -0.16
LHX3-201ENST00000371746 SNURFQ9Y675 71 aa14.06□□□□□ -0.16
LHX3-201ENST00000371746 WFDC13Q8IUB5 93 aa14.05□□□□□ -0.16
LHX3-201ENST00000371746 A8MWP4 228 aa14.05□□□□□ -0.16
LHX3-201ENST00000371746 Q96NJ1 140 aa14.05□□□□□ -0.16
LHX3-201ENST00000371746 PRR15Q8IV56 129 aa14.04□□□□□ -0.16
LHX3-201ENST00000371746 KMT2CQ8NEZ4 4911 aaKnown RBP14.03□□□□□ -0.16
LHX3-201ENST00000371746 LINC00336Q6ZUF6 198 aa14.02□□□□□ -0.17
LHX3-201ENST00000371746 A0A087X002 238 aa14.01□□□□□ -0.17
LHX3-201ENST00000371746 KLKP1Q107X0 134 aa14□□□□□ -0.17
LHX3-201ENST00000371746 OXTP01178 125 aa14□□□□□ -0.17
LHX3-201ENST00000371746 RYR2Q92736 4967 aa13.99□□□□□ -0.17
LHX3-201ENST00000371746 TMEM254Q8TBM7 123 aa13.98□□□□□ -0.17
LHX3-201ENST00000371746 DYNC1H1Q14204 4646 aaKnown RBP13.96□□□□□ -0.18
LHX3-201ENST00000371746 A0A1B0GVY2 172 aa13.94□□□□□ -0.18
LHX3-201ENST00000371746 KRTAP29-1A8MX34 341 aaPredicted RBP13.94□□□□□ -0.18
LHX3-201ENST00000371746 H7BZZ5 65 aa13.93□□□□□ -0.18
LHX3-201ENST00000371746 KRTAP13-2Q52LG2 175 aa13.93□□□□□ -0.18
LHX3-201ENST00000371746 CASC2Q6XLA1 102 aa13.93□□□□□ -0.18
LHX3-201ENST00000371746 SSBP3-AS1Q7Z2R9 100 aa13.92□□□□□ -0.18
LHX3-201ENST00000371746 NDUFB1O75438 58 aa13.91□□□□□ -0.18
LHX3-201ENST00000371746 KRTAP1-4P0C5Y4 121 aa13.9□□□□□ -0.18
LHX3-201ENST00000371746 MMP24-AS1A0A0U1RRL7 71 aa13.88□□□□□ -0.19
LHX3-201ENST00000371746 A0A0U1RQV1 116 aa13.88□□□□□ -0.19
LHX3-201ENST00000371746 SMR3BP02814 79 aaPredicted RBP13.87□□□□□ -0.19
LHX3-201ENST00000371746 C5orf47Q569G3 176 aa13.87□□□□□ -0.19
LHX3-201ENST00000371746 FAM229BQ4G0N7 80 aa13.85□□□□□ -0.19
LHX3-201ENST00000371746 SPINK6Q6UWN8 80 aa13.85□□□□□ -0.19
LHX3-201ENST00000371746 FAM236DA0A1B0GTK5 79 aa13.85□□□□□ -0.19
LHX3-201ENST00000371746 FAM236CP0DP71 79 aa13.85□□□□□ -0.19
LHX3-201ENST00000371746 CD164Q04900 197 aa13.85□□□□□ -0.19
LHX3-201ENST00000371746 IGHV6-1A0A0B4J1U7 121 aa13.84□□□□□ -0.19
LHX3-201ENST00000371746 C4orf26Q17RF5 130 aa13.82□□□□□ -0.2
LHX3-201ENST00000371746 A0A1B0GVX0 72 aa13.81□□□□□ -0.2
LHX3-201ENST00000371746 hDV103S1A0JD37 113 aa13.81□□□□□ -0.2
LHX3-201ENST00000371746 CDK2AP2O75956 126 aa13.81□□□□□ -0.2
LHX3-201ENST00000371746 PLA2G1BP04054 148 aaKnown RBP13.8□□□□□ -0.2
LHX3-201ENST00000371746 Q5XG85 94 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms