RNA–Protein interactions for RNA: ENST00000369367.7

SCAF11-202, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SCAF11, Length 7,543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-202ENST00000369367 PRO0628Q9UI54 55 aa6.04□□□□□ -1.44
SCAF11-202ENST00000369367 FLG2Q5D862 2391 aaPredicted RBP6.04□□□□□ -1.44
SCAF11-202ENST00000369367 MIR22HGQ0VDD5 57 aa6.04□□□□□ -1.44
SCAF11-202ENST00000369367 CSAG1Q6PB30 78 aa6.03□□□□□ -1.44
SCAF11-202ENST00000369367 Q8N1X5 172 aa6.03□□□□□ -1.44
SCAF11-202ENST00000369367 DSPP15924 2871 aaKnown RBP6.02□□□□□ -1.45
SCAF11-202ENST00000369367 C5orf42Q9H799 3197 aa6.01□□□□□ -1.45
SCAF11-202ENST00000369367 KRTAP26-1Q6PEX3 210 aa6□□□□□ -1.45
SCAF11-202ENST00000369367 HRES1P13985 223 aa6□□□□□ -1.45
SCAF11-202ENST00000369367 KRTAP10-2P60368 255 aa6□□□□□ -1.45
SCAF11-202ENST00000369367 LINC01554Q52M75 96 aa6□□□□□ -1.45
SCAF11-202ENST00000369367 MAP1AP78559 2803 aaPredicted RBP5.98□□□□□ -1.45
SCAF11-202ENST00000369367 UTRNP46939 3433 aa5.98□□□□□ -1.45
SCAF11-202ENST00000369367 RANBP2P49792 3224 aaKnown RBP5.98□□□□□ -1.45
SCAF11-202ENST00000369367 UBR5O95071 2799 aaPredicted RBP5.98□□□□□ -1.45
SCAF11-202ENST00000369367 HTTP42858 3142 aa5.97□□□□□ -1.45
SCAF11-202ENST00000369367 LINC00483Q53H64 154 aa5.95□□□□□ -1.46
SCAF11-202ENST00000369367 SPINT4Q6UDR6 99 aa5.95□□□□□ -1.46
SCAF11-202ENST00000369367 CAMK2N1Q7Z7J9 78 aa5.95□□□□□ -1.46
SCAF11-202ENST00000369367 STAB2Q8WWQ8 2551 aa5.94□□□□□ -1.46
SCAF11-202ENST00000369367 CDC42SE1Q9NRR8 79 aa5.94□□□□□ -1.46
SCAF11-202ENST00000369367 S4R3F8 94 aa5.94□□□□□ -1.46
SCAF11-202ENST00000369367 H7BZZ5 65 aa5.93□□□□□ -1.46
SCAF11-202ENST00000369367 MMP24-AS1A0A0U1RRL7 71 aa5.93□□□□□ -1.46
SCAF11-202ENST00000369367 OCR1Q9BZK8 76 aa5.93□□□□□ -1.46
SCAF11-202ENST00000369367 C4orf26Q17RF5 130 aa5.92□□□□□ -1.46
SCAF11-202ENST00000369367 DMBT1Q9UGM3 2413 aaPredicted RBP5.92□□□□□ -1.46
SCAF11-202ENST00000369367 LINC00472Q9H8W2 130 aa5.92□□□□□ -1.46
SCAF11-202ENST00000369367 SPINK7P58062 85 aa5.91□□□□□ -1.46
SCAF11-202ENST00000369367 RPS29P62273 56 aaKnown RBP5.9□□□□□ -1.46
SCAF11-202ENST00000369367 A0A0D9SG42 100 aa5.89□□□□□ -1.47
SCAF11-202ENST00000369367 A0A1B0GU33 70 aa5.87□□□□□ -1.47
SCAF11-202ENST00000369367 Q8NDZ9 215 aa5.87□□□□□ -1.47
SCAF11-202ENST00000369367 Q5W150 140 aa5.85□□□□□ -1.47
SCAF11-202ENST00000369367 FLNCQ14315 2725 aa5.84□□□□□ -1.47
SCAF11-202ENST00000369367 Q6ZRN7 208 aaPredicted RBP5.84□□□□□ -1.47
SCAF11-202ENST00000369367 DMAC1Q96GE9 116 aa5.84□□□□□ -1.47
SCAF11-202ENST00000369367 ITPR1Q14643 2758 aa5.84□□□□□ -1.47
SCAF11-202ENST00000369367 R4GN34 69 aa5.83□□□□□ -1.48
SCAF11-202ENST00000369367 HIVEP1P15822 2718 aa5.82□□□□□ -1.48
SCAF11-202ENST00000369367 A0A0C4DFX4 3053 aa5.81□□□□□ -1.48
SCAF11-202ENST00000369367 KRTAP4-16G5E9R7 235 aaPredicted RBP5.81□□□□□ -1.48
SCAF11-202ENST00000369367 ASB16-AS1Q495Z4 193 aa5.81□□□□□ -1.48
SCAF11-202ENST00000369367 Q8N9P0 234 aaPredicted RBP5.8□□□□□ -1.48
SCAF11-202ENST00000369367 WDFY4Q6ZS81 3184 aa5.79□□□□□ -1.48
SCAF11-202ENST00000369367 PANO1I0J062 215 aa5.79□□□□□ -1.48
SCAF11-202ENST00000369367 Q1T7F1 81 aa5.77□□□□□ -1.49
SCAF11-202ENST00000369367 TENM4Q6N022 2769 aa5.77□□□□□ -1.49
SCAF11-202ENST00000369367 PRUNE2Q8WUY3 3088 aa5.77□□□□□ -1.49
SCAF11-202ENST00000369367 NBEAL2Q6ZNJ1 2754 aa5.76□□□□□ -1.49
SCAF11-202ENST00000369367 LAMA3Q16787 3333 aa5.76□□□□□ -1.49
SCAF11-202ENST00000369367 A0A087X002 238 aa5.76□□□□□ -1.49
SCAF11-202ENST00000369367 Q5XG85 94 aa5.74□□□□□ -1.49
SCAF11-202ENST00000369367 PCNTO95613 3336 aa5.73□□□□□ -1.49
SCAF11-202ENST00000369367 LUZP6Q538Z0 58 aa5.73□□□□□ -1.49
SCAF11-202ENST00000369367 CFAP54Q96N23 3096 aa5.73□□□□□ -1.49
SCAF11-202ENST00000369367 LINC01558Q9Y6Z2 57 aa5.72□□□□□ -1.49
SCAF11-202ENST00000369367 PLAC4Q8WY50 150 aa5.71□□□□□ -1.5
SCAF11-202ENST00000369367 FRYQ5TBA9 3013 aa5.71□□□□□ -1.5
SCAF11-202ENST00000369367 Q75L30 129 aa5.7□□□□□ -1.5
SCAF11-202ENST00000369367 UTP20O75691 2785 aaKnown RBP5.69□□□□□ -1.5
SCAF11-202ENST00000369367 NIPBLQ6KC79 2804 aaeCLIP5.67□□□□□ -1.51e-6■■■■□ 22.4
SCAF11-202ENST00000369367 MKI67P46013 3256 aaKnown RBP5.67□□□□□ -1.5
SCAF11-202ENST00000369367 H1FX-AS1Q4G0G2 97 aa5.67□□□□□ -1.5
SCAF11-202ENST00000369367 M0QZ58 72 aa5.67□□□□□ -1.5
SCAF11-202ENST00000369367 KTN1-AS1Q86SY8 53 aa5.67□□□□□ -1.5
SCAF11-202ENST00000369367 APCP25054 2843 aa5.66□□□□□ -1.5
SCAF11-202ENST00000369367 LCA10Q71F78 164 aa5.66□□□□□ -1.5
SCAF11-202ENST00000369367 TRIOO75962 3097 aa5.65□□□□□ -1.51
SCAF11-202ENST00000369367 KRTAP13-1Q8IUC0 172 aa5.63□□□□□ -1.51
SCAF11-202ENST00000369367 RPL37P61927 97 aaKnown RBP5.63□□□□□ -1.51
SCAF11-202ENST00000369367 FRYLO94915 3013 aa5.62□□□□□ -1.51
SCAF11-202ENST00000369367 KRTAP29-1A8MX34 341 aaPredicted RBP5.61□□□□□ -1.51
SCAF11-202ENST00000369367 KRTAP13-2Q52LG2 175 aa5.6□□□□□ -1.51
SCAF11-202ENST00000369367 ADM2Q7Z4H4 148 aa5.58□□□□□ -1.52
SCAF11-202ENST00000369367 VPS13AQ96RL7 3174 aa5.58□□□□□ -1.52
SCAF11-202ENST00000369367 KRTAP11-1Q8IUC1 163 aa5.58□□□□□ -1.52
SCAF11-202ENST00000369367 TACC2O95359 2948 aa5.58□□□□□ -1.52
SCAF11-202ENST00000369367 LAMA2P24043 3122 aaKnown RBP5.57□□□□□ -1.52
SCAF11-202ENST00000369367 COL12A1Q99715 3063 aa5.57□□□□□ -1.52
SCAF11-202ENST00000369367 LRBAP50851 2863 aa5.55□□□□□ -1.52
SCAF11-202ENST00000369367 KRTAP7-1Q8IUC3 87 aa5.55□□□□□ -1.52
SCAF11-202ENST00000369367 ATMQ13315 3056 aa5.55□□□□□ -1.52
SCAF11-202ENST00000369367 REV3LO60673 3130 aa5.54□□□□□ -1.52
SCAF11-202ENST00000369367 C20orf166-AS1Q96NR2 134 aa5.53□□□□□ -1.52
SCAF11-202ENST00000369367 NOTCH2NLQ7Z3S9 236 aa5.53□□□□□ -1.52
SCAF11-202ENST00000369367 BRCA2P51587 3418 aa5.52□□□□□ -1.53
SCAF11-202ENST00000369367 ROMO1P60602 79 aa5.49□□□□□ -1.53
SCAF11-202ENST00000369367 A8MUU9 505 aa5.49□□□□□ -1.53
SCAF11-202ENST00000369367 CRYBG3Q68DQ2 2970 aa5.48□□□□□ -1.53
SCAF11-202ENST00000369367 DMXL2Q8TDJ6 3036 aa5.47□□□□□ -1.53
SCAF11-202ENST00000369367 TNRC18O15417 2968 aaPredicted RBP5.47□□□□□ -1.53
SCAF11-202ENST00000369367 ZZEF1O43149 2961 aa5.46□□□□□ -1.53
SCAF11-202ENST00000369367 NBEAQ8NFP9 2946 aa5.46□□□□□ -1.54
SCAF11-202ENST00000369367 Q5VV11 94 aa5.46□□□□□ -1.54
SCAF11-202ENST00000369367 XIRP2A4UGR9 3374 aa5.46□□□□□ -1.54
SCAF11-202ENST00000369367 TPRXLQ17RH7 258 aa5.44□□□□□ -1.54
SCAF11-202ENST00000369367 CELSR2Q9HCU4 2923 aa5.43□□□□□ -1.54
SCAF11-202ENST00000369367 EYSQ5T1H1 3165 aa5.42□□□□□ -1.54
SCAF11-202ENST00000369367 TENM1Q9UKZ4 2725 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms