RNA–Protein interactions for RNA: ENST00000369258.8

CHD1L-202, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1L, Length 2,967 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-202ENST00000369258 SPRR4Q96PI1 79 aa8.24□□□□□ -1.09
CHD1L-202ENST00000369258 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.23□□□□□ -1.09
CHD1L-202ENST00000369258 LCE6AA0A183 80 aa8.22□□□□□ -1.09
CHD1L-202ENST00000369258 WFDC13Q8IUB5 93 aa8.22□□□□□ -1.09
CHD1L-202ENST00000369258 IGLV5-37A0A075B6J1 123 aa8.22□□□□□ -1.09
CHD1L-202ENST00000369258 DNAH10OSP0CZ25 163 aa8.22□□□□□ -1.09
CHD1L-202ENST00000369258 DNAH3Q8TD57 4116 aa8.22□□□□□ -1.09
CHD1L-202ENST00000369258 MRPL55Q7Z7F7 128 aaKnown RBP8.22□□□□□ -1.09
CHD1L-202ENST00000369258 hDV103S1A0JD37 113 aa8.21□□□□□ -1.09
CHD1L-202ENST00000369258 CHTF8P0CG12 524 aa8.2□□□□□ -1.1
CHD1L-202ENST00000369258 HCG22E2RYF7 251 aa8.19□□□□□ -1.1
CHD1L-202ENST00000369258 C1orf64Q8NEQ6 169 aa8.19□□□□□ -1.1
CHD1L-202ENST00000369258 LINC00476Q8WZB0 136 aa8.19□□□□□ -1.1
CHD1L-202ENST00000369258 ZCCHC13Q8WW36 166 aaKnown RBP8.19□□□□□ -1.1
CHD1L-202ENST00000369258 PSCAO43653 123 aa8.18□□□□□ -1.1
CHD1L-202ENST00000369258 PLECQ15149 4684 aaKnown RBP8.18□□□□□ -1.1
CHD1L-202ENST00000369258 KRTAP24-1Q3LI83 254 aa8.17□□□□□ -1.1
CHD1L-202ENST00000369258 REG3GQ6UW15 175 aa8.17□□□□□ -1.1
CHD1L-202ENST00000369258 KRTAP11-1Q8IUC1 163 aa8.17□□□□□ -1.1
CHD1L-202ENST00000369258 TGP01266 2768 aa8.17□□□□□ -1.1
CHD1L-202ENST00000369258 KRTAP1-5Q9BYS1 174 aa8.16□□□□□ -1.1
CHD1L-202ENST00000369258 A0A087WSZ3 146 aa8.16□□□□□ -1.1
CHD1L-202ENST00000369258 IGFL1Q6UW32 110 aa8.14□□□□□ -1.11
CHD1L-202ENST00000369258 C1orf195Q5TG92 126 aa8.13□□□□□ -1.11
CHD1L-202ENST00000369258 PSPHP1O15172 72 aa8.13□□□□□ -1.11
CHD1L-202ENST00000369258 MP68P56378 58 aa8.12□□□□□ -1.11
CHD1L-202ENST00000369258 Q1T7F1 81 aa8.11□□□□□ -1.11
CHD1L-202ENST00000369258 PHF5AQ7RTV0 110 aaKnown RBP8.1□□□□□ -1.11
CHD1L-202ENST00000369258 NDUFB1O75438 58 aa8.1□□□□□ -1.11
CHD1L-202ENST00000369258 CYP4F30PQ9H0H9 118 aa8.1□□□□□ -1.11
CHD1L-202ENST00000369258 KMT2AQ03164 3969 aa8.1□□□□□ -1.11
CHD1L-202ENST00000369258 A8MU10 97 aa8.1□□□□□ -1.11
CHD1L-202ENST00000369258 LINC00208Q96KT6 92 aa8.09□□□□□ -1.11
CHD1L-202ENST00000369258 UBE2AP49459 152 aa8.07□□□□□ -1.12
CHD1L-202ENST00000369258 TRAV22A0A0B4J277 110 aa8.06□□□□□ -1.12
CHD1L-202ENST00000369258 IGLV8-61A0A075B6I0 122 aa8.04□□□□□ -1.12
CHD1L-202ENST00000369258 PANO1I0J062 215 aa8.04□□□□□ -1.12
CHD1L-202ENST00000369258 B9D2Q9BPU9 175 aa8.04□□□□□ -1.12
CHD1L-202ENST00000369258 CASC2Q6XLA1 102 aa8.04□□□□□ -1.12
CHD1L-202ENST00000369258 H0Y9P7 68 aa8.03□□□□□ -1.12
CHD1L-202ENST00000369258 V9GYY9 64 aa8.03□□□□□ -1.12
CHD1L-202ENST00000369258 STARD9Q9P2P6 4700 aa8.02□□□□□ -1.13
CHD1L-202ENST00000369258 KRTAP29-1A8MX34 341 aaPredicted RBP8.02□□□□□ -1.13
CHD1L-202ENST00000369258 C16orf90A8MZG2 172 aa8.02□□□□□ -1.13
CHD1L-202ENST00000369258 PRR15Q8IV56 129 aa8.02□□□□□ -1.13
CHD1L-202ENST00000369258 FBN3Q75N90 2809 aa8.01□□□□□ -1.13
CHD1L-202ENST00000369258 A8MUN3 132 aa8.01□□□□□ -1.13
CHD1L-202ENST00000369258 K7EIL1 84 aa8.01□□□□□ -1.13
CHD1L-202ENST00000369258 ANAPC11Q9NYG5 84 aa7.99□□□□□ -1.13
CHD1L-202ENST00000369258 CNBPP62633 177 aaKnown RBP7.99□□□□□ -1.13
CHD1L-202ENST00000369258 H0Y9J4 135 aa7.98□□□□□ -1.13
CHD1L-202ENST00000369258 A8MWP4 228 aa7.98□□□□□ -1.13
CHD1L-202ENST00000369258 DNAH8Q96JB1 4490 aa7.97□□□□□ -1.13
CHD1L-202ENST00000369258 IGLV9-49A0A0B4J1Y8 123 aa7.97□□□□□ -1.13
CHD1L-202ENST00000369258 H3BPC8 53 aa7.97□□□□□ -1.13
CHD1L-202ENST00000369258 PRKDCP78527 4128 aaKnown RBP7.97□□□□□ -1.13
CHD1L-202ENST00000369258 HECTD4Q9Y4D8 3996 aa7.96□□□□□ -1.13
CHD1L-202ENST00000369258 SPANXA2-OT1Q8N9U9 137 aa7.96□□□□□ -1.13
CHD1L-202ENST00000369258 UBE2DNLQ8IWF7 75 aa7.96□□□□□ -1.14
CHD1L-202ENST00000369258 LINC00472Q9H8W2 130 aa7.95□□□□□ -1.14
CHD1L-202ENST00000369258 MEGF8Q7Z7M0 2845 aa7.95□□□□□ -1.14
CHD1L-202ENST00000369258 DNAH2Q9P225 4427 aa7.95□□□□□ -1.14
CHD1L-202ENST00000369258 DNAH6Q9C0G6 4158 aa7.94□□□□□ -1.14
CHD1L-202ENST00000369258 PCOTHQ58A44 107 aa7.94□□□□□ -1.14
CHD1L-202ENST00000369258 DNAH17Q9UFH2 4485 aa7.94□□□□□ -1.14
CHD1L-202ENST00000369258 SPRR1BP22528 89 aa7.93□□□□□ -1.14
CHD1L-202ENST00000369258 PMAIP1Q13794 54 aa7.92□□□□□ -1.14
CHD1L-202ENST00000369258 Q5VV11 94 aa7.92□□□□□ -1.14
CHD1L-202ENST00000369258 CHKB-CPT1BH3BT56 60 aa7.91□□□□□ -1.14
CHD1L-202ENST00000369258 Q8N9P0 234 aaPredicted RBP7.91□□□□□ -1.14
CHD1L-202ENST00000369258 LIMD2Q9BT23 127 aa7.9□□□□□ -1.14
CHD1L-202ENST00000369258 SEC61GP60059 68 aa7.9□□□□□ -1.15
CHD1L-202ENST00000369258 PRR15LQ9BU68 103 aa7.9□□□□□ -1.15
CHD1L-202ENST00000369258 VPS13DQ5THJ4 4388 aa7.9□□□□□ -1.15
CHD1L-202ENST00000369258 C9orf163Q8N9P6 203 aa7.89□□□□□ -1.15
CHD1L-202ENST00000369258 MMP24-AS1A0A0U1RRL7 71 aa7.89□□□□□ -1.15
CHD1L-202ENST00000369258 C14orf177Q52M58 125 aa7.88□□□□□ -1.15
CHD1L-202ENST00000369258 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.87□□□□□ -1.15
CHD1L-202ENST00000369258 COA5Q86WW8 74 aa7.86□□□□□ -1.15
CHD1L-202ENST00000369258 A0A087X002 238 aa7.85□□□□□ -1.15
CHD1L-202ENST00000369258 NDUFS5O43920 106 aa7.85□□□□□ -1.15
CHD1L-202ENST00000369258 NOTCH2NLQ7Z3S9 236 aa7.85□□□□□ -1.15
CHD1L-202ENST00000369258 IGLV7-46A0A075B6I9 117 aa7.84□□□□□ -1.15
CHD1L-202ENST00000369258 IGHV6-1A0A0B4J1U7 121 aa7.83□□□□□ -1.16
CHD1L-202ENST00000369258 SPINK6Q6UWN8 80 aa7.81□□□□□ -1.16
CHD1L-202ENST00000369258 MOBPQ13875 183 aa7.81□□□□□ -1.16
CHD1L-202ENST00000369258 SPTSSBQ8NFR3 76 aa7.8□□□□□ -1.16
CHD1L-202ENST00000369258 TP53AIP1Q9HCN2 124 aa7.8□□□□□ -1.16
CHD1L-202ENST00000369258 A6NED7 52 aa7.8□□□□□ -1.16
CHD1L-202ENST00000369258 DNAH11Q96DT5 4516 aa7.8□□□□□ -1.16
CHD1L-202ENST00000369258 CD164Q04900 197 aa7.79□□□□□ -1.16
CHD1L-202ENST00000369258 APLNQ9ULZ1 77 aa7.79□□□□□ -1.16
CHD1L-202ENST00000369258 C8orf17Q9NRJ1 99 aa7.79□□□□□ -1.16
CHD1L-202ENST00000369258 Q96NJ1 140 aa7.78□□□□□ -1.16
CHD1L-202ENST00000369258 KRTAP13-1Q8IUC0 172 aa7.78□□□□□ -1.16
CHD1L-202ENST00000369258 SPAG11AQ6PDA7 123 aa7.77□□□□□ -1.16
CHD1L-202ENST00000369258 Q75L30 129 aa7.77□□□□□ -1.16
CHD1L-202ENST00000369258 MDFIQ99750 246 aa7.77□□□□□ -1.17
CHD1L-202ENST00000369258 DYNC2H1Q8NCM8 4307 aaKnown RBP7.77□□□□□ -1.17
CHD1L-202ENST00000369258 CDK2AP2O75956 126 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms