RNA–Protein interactions for RNA: ENST00000368147.8

SPTA1-201, Transcript of spectrin alpha, erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTA1, Length 7,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-201ENST00000368147 LAMA2P24043 3122 aaKnown RBP4.56□□□□□ -1.68
SPTA1-201ENST00000368147 CFAP54Q96N23 3096 aa4.56□□□□□ -1.68
SPTA1-201ENST00000368147 C9orf163Q8N9P6 203 aa4.55□□□□□ -1.68
SPTA1-201ENST00000368147 USP34Q70CQ2 3546 aa4.55□□□□□ -1.68
SPTA1-201ENST00000368147 A0A096LNT2 108 aa4.55□□□□□ -1.68
SPTA1-201ENST00000368147 ROMO1P60602 79 aa4.55□□□□□ -1.68
SPTA1-201ENST00000368147 Q8N9P0 234 aaPredicted RBP4.55□□□□□ -1.68
SPTA1-201ENST00000368147 KCNQ1DNQ9H478 68 aa4.54□□□□□ -1.68
SPTA1-201ENST00000368147 TEP1Q99973 2627 aaKnown RBP4.54□□□□□ -1.68
SPTA1-201ENST00000368147 GIG44P09565 113 aaPredicted RBP4.54□□□□□ -1.68
SPTA1-201ENST00000368147 LINC00612Q8N6U2 182 aa4.53□□□□□ -1.68
SPTA1-201ENST00000368147 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.52□□□□□ -1.69
SPTA1-201ENST00000368147 KRTAP1-1Q07627 177 aa4.52□□□□□ -1.69
SPTA1-201ENST00000368147 TRIOO75962 3097 aa4.52□□□□□ -1.69
SPTA1-201ENST00000368147 COL6A3P12111 3177 aa4.51□□□□□ -1.69
SPTA1-201ENST00000368147 Q8N377 158 aa4.51□□□□□ -1.69
SPTA1-201ENST00000368147 REV3LO60673 3130 aa4.51□□□□□ -1.69
SPTA1-201ENST00000368147 UNC79Q9P2D8 2635 aa4.5□□□□□ -1.69
SPTA1-201ENST00000368147 SPTBN5Q9NRC6 3674 aaKnown RBP4.5□□□□□ -1.69
SPTA1-201ENST00000368147 Q5VSD8 79 aa4.5□□□□□ -1.69
SPTA1-201ENST00000368147 KMT2BQ9UMN6 2715 aaPredicted RBP4.49□□□□□ -1.69
SPTA1-201ENST00000368147 UNC80Q8N2C7 3258 aa4.49□□□□□ -1.69
SPTA1-201ENST00000368147 S4R3F8 94 aa4.49□□□□□ -1.69
SPTA1-201ENST00000368147 SPRR4Q96PI1 79 aa4.49□□□□□ -1.69
SPTA1-201ENST00000368147 NOTCH1P46531 2555 aa4.49□□□□□ -1.69
SPTA1-201ENST00000368147 R4GN34 69 aa4.49□□□□□ -1.69
SPTA1-201ENST00000368147 PRR34Q9NV39 138 aa4.49□□□□□ -1.69
SPTA1-201ENST00000368147 NBEAL1Q6ZS30 2694 aa4.48□□□□□ -1.69
SPTA1-201ENST00000368147 CHD6Q8TD26 2715 aa4.47□□□□□ -1.69
SPTA1-201ENST00000368147 RPL37P61927 97 aaKnown RBP4.46□□□□□ -1.69
SPTA1-201ENST00000368147 OCR1Q9BZK8 76 aa4.46□□□□□ -1.7
SPTA1-201ENST00000368147 COL6A5A8TX70 2615 aa4.46□□□□□ -1.7
SPTA1-201ENST00000368147 CHD7Q9P2D1 2997 aa4.46□□□□□ -1.7
SPTA1-201ENST00000368147 NDUFAF8A1L188 74 aa4.44□□□□□ -1.7
SPTA1-201ENST00000368147 LITAFQ99732 161 aa4.44□□□□□ -1.7
SPTA1-201ENST00000368147 ITPR2Q14571 2701 aa4.44□□□□□ -1.7
SPTA1-201ENST00000368147 SPEGQ15772 3267 aa4.43□□□□□ -1.7
SPTA1-201ENST00000368147 CNBPP62633 177 aaKnown RBP4.43□□□□□ -1.7
SPTA1-201ENST00000368147 PRAC1Q96KF2 57 aa4.42□□□□□ -1.7
SPTA1-201ENST00000368147 VCANP13611 3396 aa4.42□□□□□ -1.7
SPTA1-201ENST00000368147 VPS13AQ96RL7 3174 aa4.4□□□□□ -1.71
SPTA1-201ENST00000368147 C20orf166-AS1Q96NR2 134 aa4.39□□□□□ -1.71
SPTA1-201ENST00000368147 HTTP42858 3142 aa4.39□□□□□ -1.71
SPTA1-201ENST00000368147 MYO15AQ9UKN7 3530 aa4.39□□□□□ -1.71
SPTA1-201ENST00000368147 ASPMQ8IZT6 3477 aa4.38□□□□□ -1.71
SPTA1-201ENST00000368147 Q5VV11 94 aa4.38□□□□□ -1.71
SPTA1-201ENST00000368147 FP248Q71RG6 208 aaPredicted RBP4.38□□□□□ -1.71
SPTA1-201ENST00000368147 A0A0C4DFX4 3053 aa4.38□□□□□ -1.71
SPTA1-201ENST00000368147 EYSQ5T1H1 3165 aa4.38□□□□□ -1.71
SPTA1-201ENST00000368147 WDFY4Q6ZS81 3184 aa4.38□□□□□ -1.71
SPTA1-201ENST00000368147 SPATA8Q6RVD6 105 aa4.38□□□□□ -1.71
SPTA1-201ENST00000368147 KRTAP10-2P60368 255 aa4.37□□□□□ -1.71
SPTA1-201ENST00000368147 ZCCHC13Q8WW36 166 aaKnown RBP4.37□□□□□ -1.71
SPTA1-201ENST00000368147 FREM2Q5SZK8 3169 aa4.37□□□□□ -1.71
SPTA1-201ENST00000368147 A0A1W2PNM2 257 aa4.36□□□□□ -1.71
SPTA1-201ENST00000368147 KRTAP10-1P60331 282 aa4.35□□□□□ -1.71
SPTA1-201ENST00000368147 LCE6AA0A183 80 aa4.35□□□□□ -1.71
SPTA1-201ENST00000368147 CRYBG3Q68DQ2 2970 aa4.35□□□□□ -1.71
SPTA1-201ENST00000368147 WDFY3Q8IZQ1 3526 aa4.34□□□□□ -1.71
SPTA1-201ENST00000368147 LAMA1P25391 3075 aa4.34□□□□□ -1.71
SPTA1-201ENST00000368147 MGAQ8IWI9 3026 aa4.33□□□□□ -1.72
SPTA1-201ENST00000368147 Q5XG85 94 aa4.33□□□□□ -1.72
SPTA1-201ENST00000368147 CFAP47Q6ZTR5 3102 aa4.33□□□□□ -1.72
SPTA1-201ENST00000368147 KLK9Q2XQG4 91 aa4.33□□□□□ -1.72
SPTA1-201ENST00000368147 ZNF292O60281 2723 aa4.33□□□□□ -1.72
SPTA1-201ENST00000368147 FAM229BQ4G0N7 80 aa4.32□□□□□ -1.72
SPTA1-201ENST00000368147 STAB2Q8WWQ8 2551 aa4.32□□□□□ -1.72
SPTA1-201ENST00000368147 M0QZ58 72 aa4.31□□□□□ -1.72
SPTA1-201ENST00000368147 MAP1AP78559 2803 aaPredicted RBP4.3□□□□□ -1.72
SPTA1-201ENST00000368147 PLAC8Q9NZF1 115 aa4.3□□□□□ -1.72
SPTA1-201ENST00000368147 OXTP01178 125 aa4.29□□□□□ -1.72
SPTA1-201ENST00000368147 FRYQ5TBA9 3013 aa4.29□□□□□ -1.72
SPTA1-201ENST00000368147 KRTAP25-1Q3LHN0 102 aa4.29□□□□□ -1.72
SPTA1-201ENST00000368147 KRTAP1-5Q9BYS1 174 aa4.29□□□□□ -1.72
SPTA1-201ENST00000368147 Q6ZR54 194 aa4.28□□□□□ -1.72
SPTA1-201ENST00000368147 GCN1Q92616 2671 aaKnown RBP4.28□□□□□ -1.72
SPTA1-201ENST00000368147 PP632Q6XCG6 107 aa4.26□□□□□ -1.73
SPTA1-201ENST00000368147 Q8NDZ9 215 aa4.26□□□□□ -1.73
SPTA1-201ENST00000368147 NBPF19A0A087WUL8 3843 aa4.24□□□□□ -1.73
SPTA1-201ENST00000368147 IGSF10Q6WRI0 2623 aa4.24□□□□□ -1.73
SPTA1-201ENST00000368147 Q5W150 140 aa4.23□□□□□ -1.73
SPTA1-201ENST00000368147 ADM2Q7Z4H4 148 aa4.22□□□□□ -1.73
SPTA1-201ENST00000368147 A0A087X002 238 aa4.21□□□□□ -1.74
SPTA1-201ENST00000368147 P0C880 135 aa4.21□□□□□ -1.74
SPTA1-201ENST00000368147 DSPP15924 2871 aaKnown RBP4.21□□□□□ -1.74
SPTA1-201ENST00000368147 TRANK1O15050 2925 aa4.21□□□□□ -1.74
SPTA1-201ENST00000368147 FRYLO94915 3013 aa4.2□□□□□ -1.74
SPTA1-201ENST00000368147 DCHS1Q96JQ0 3298 aa4.2□□□□□ -1.74
SPTA1-201ENST00000368147 MMP24-AS1A0A0U1RRL7 71 aa4.2□□□□□ -1.74
SPTA1-201ENST00000368147 PANO1I0J062 215 aa4.19□□□□□ -1.74
SPTA1-201ENST00000368147 LRBAP50851 2863 aa4.19□□□□□ -1.74
SPTA1-201ENST00000368147 UTP20O75691 2785 aaKnown RBP4.19□□□□□ -1.74
SPTA1-201ENST00000368147 LAMA5O15230 3695 aa4.19□□□□□ -1.74
SPTA1-201ENST00000368147 FLNCQ14315 2725 aa4.18□□□□□ -1.74
SPTA1-201ENST00000368147 CHD9Q3L8U1 2897 aa4.18□□□□□ -1.74
SPTA1-201ENST00000368147 APCP25054 2843 aa4.17□□□□□ -1.74
SPTA1-201ENST00000368147 TNP1P09430 55 aa4.17□□□□□ -1.74
SPTA1-201ENST00000368147 C10orf95Q9H7T3 257 aa4.17□□□□□ -1.74
SPTA1-201ENST00000368147 BOD1L1Q8NFC6 3051 aa4.15□□□□□ -1.75
SPTA1-201ENST00000368147 ATMQ13315 3056 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms