RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 COX7B2Q8TF08 81 aa2.45□□□□□ -2.02
RNU4-39P-201ENST00000362455 CYSLTR1Q9Y271 337 aa2.45□□□□□ -2.02
RNU4-39P-201ENST00000362455 SYNE2Q8WXH0 6885 aaKnown RBP2.45□□□□□ -2.02
RNU4-39P-201ENST00000362455 SPINK8P0C7L1 97 aa2.44□□□□□ -2.02
RNU4-39P-201ENST00000362455 PCOTHQ58A44 107 aa2.44□□□□□ -2.02
RNU4-39P-201ENST00000362455 COMMD7Q86VX2 200 aa2.44□□□□□ -2.02
RNU4-39P-201ENST00000362455 C2orf88Q9BSF0 95 aa2.44□□□□□ -2.02
RNU4-39P-201ENST00000362455 MACF1Q9UPN3 7388 aaKnown RBP2.43□□□□□ -2.02
RNU4-39P-201ENST00000362455 F8W036 122 aa2.43□□□□□ -2.02
RNU4-39P-201ENST00000362455 ERC2-IT1O76042 136 aa2.43□□□□□ -2.02
RNU4-39P-201ENST00000362455 SPINK1P00995 79 aa2.43□□□□□ -2.02
RNU4-39P-201ENST00000362455 SMCR5Q8TEV8 140 aa2.43□□□□□ -2.02
RNU4-39P-201ENST00000362455 TOMM6Q96B49 74 aa2.43□□□□□ -2.02
RNU4-39P-201ENST00000362455 CST9LQ9H4G1 147 aa2.43□□□□□ -2.02
RNU4-39P-201ENST00000362455 NAT8Q9UHE5 227 aa2.43□□□□□ -2.02
RNU4-39P-201ENST00000362455 H3BPC8 53 aa2.42□□□□□ -2.02
RNU4-39P-201ENST00000362455 DDTP30046 118 aa2.42□□□□□ -2.02
RNU4-39P-201ENST00000362455 SPRR1AP35321 89 aa2.42□□□□□ -2.02
RNU4-39P-201ENST00000362455 RAB14P61106 215 aa2.42□□□□□ -2.02
RNU4-39P-201ENST00000362455 SEC11AP67812 179 aa2.42□□□□□ -2.02
RNU4-39P-201ENST00000362455 C2orf91Q6ZV80 131 aa2.42□□□□□ -2.02
RNU4-39P-201ENST00000362455 LAMTOR2Q9Y2Q5 125 aa2.42□□□□□ -2.02
RNU4-39P-201ENST00000362455 S100A8P05109 93 aa2.41□□□□□ -2.02
RNU4-39P-201ENST00000362455 RPS29P62273 56 aaKnown RBP2.41□□□□□ -2.02
RNU4-39P-201ENST00000362455 ZNF625Q96I27 306 aaPredicted RBP2.41□□□□□ -2.02
RNU4-39P-201ENST00000362455 ERG28Q9UKR5 140 aa2.41□□□□□ -2.02
RNU4-39P-201ENST00000362455 LINC01546A6NGU7 62 aa2.4□□□□□ -2.03
RNU4-39P-201ENST00000362455 K7EMI3 77 aa2.4□□□□□ -2.03
RNU4-39P-201ENST00000362455 SCGB3A1Q96QR1 104 aa2.4□□□□□ -2.03
RNU4-39P-201ENST00000362455 KCNQ1DNQ9H478 68 aa2.4□□□□□ -2.03
RNU4-39P-201ENST00000362455 C9orf92A6NGG3 77 aa2.39□□□□□ -2.03
RNU4-39P-201ENST00000362455 M0R2T5 61 aa2.39□□□□□ -2.03
RNU4-39P-201ENST00000362455 IGLC3P0DOY3 106 aa2.39□□□□□ -2.03
RNU4-39P-201ENST00000362455 C1orf195Q5TG92 126 aa2.39□□□□□ -2.03
RNU4-39P-201ENST00000362455 SSBP3-AS1Q7Z2R9 100 aa2.39□□□□□ -2.03
RNU4-39P-201ENST00000362455 Q9BRP9 147 aa2.39□□□□□ -2.03
RNU4-39P-201ENST00000362455 NXT2Q9NPJ8 142 aaKnown RBP2.39□□□□□ -2.03
RNU4-39P-201ENST00000362455 A0A1B0GVG6 124 aa2.38□□□□□ -2.03
RNU4-39P-201ENST00000362455 C11orf86A6NJI1 115 aa2.38□□□□□ -2.03
RNU4-39P-201ENST00000362455 KRTAP12-3P60328 96 aa2.38□□□□□ -2.03
RNU4-39P-201ENST00000362455 COX17Q14061 63 aa2.38□□□□□ -2.03
RNU4-39P-201ENST00000362455 MIEN1Q9BRT3 115 aa2.38□□□□□ -2.03
RNU4-39P-201ENST00000362455 TRBV10-3A0A0K0K1G6 114 aa2.37□□□□□ -2.03
RNU4-39P-201ENST00000362455 NCR3O14931 201 aa2.37□□□□□ -2.03
RNU4-39P-201ENST00000362455 PEA15Q15121 130 aa2.37□□□□□ -2.03
RNU4-39P-201ENST00000362455 AKAP14Q86UN6 197 aa2.37□□□□□ -2.03
RNU4-39P-201ENST00000362455 FAM19A2Q8N3H0 131 aa2.37□□□□□ -2.03
RNU4-39P-201ENST00000362455 NDUFA12Q9UI09 145 aa2.37□□□□□ -2.03
RNU4-39P-201ENST00000362455 H3BRM9 83 aa2.36□□□□□ -2.03
RNU4-39P-201ENST00000362455 SMIM13P0DJ93 91 aa2.36□□□□□ -2.03
RNU4-39P-201ENST00000362455 LINC00158P58513 81 aa2.36□□□□□ -2.03
RNU4-39P-201ENST00000362455 ETDCA0A1B0GVM5 59 aa2.35□□□□□ -2.03
RNU4-39P-201ENST00000362455 G0S2P27469 103 aa2.35□□□□□ -2.03
RNU4-39P-201ENST00000362455 LOC107984156A0A0G2JMH3 177 aa2.34□□□□□ -2.03
RNU4-39P-201ENST00000362455 MT-ND4LP03901 98 aa2.34□□□□□ -2.03
RNU4-39P-201ENST00000362455 RPL37P61927 97 aaKnown RBP2.34□□□□□ -2.03
RNU4-39P-201ENST00000362455 PMCHL1Q16048 86 aa2.34□□□□□ -2.03
RNU4-39P-201ENST00000362455 HRCT1Q6UXD1 115 aa2.34□□□□□ -2.03
RNU4-39P-201ENST00000362455 COX6B2Q6YFQ2 88 aa2.34□□□□□ -2.03
RNU4-39P-201ENST00000362455 Q6ZRX8 168 aa2.34□□□□□ -2.03
RNU4-39P-201ENST00000362455 ARL17AQ8IVW1 177 aa2.34□□□□□ -2.03
RNU4-39P-201ENST00000362455 TRAV9-1A0A075B6T8 112 aa2.33□□□□□ -2.04
RNU4-39P-201ENST00000362455 A0A0G2JQZ4 141 aa2.33□□□□□ -2.04
RNU4-39P-201ENST00000362455 MT2AP02795 61 aa2.33□□□□□ -2.04
RNU4-39P-201ENST00000362455 NDUFA6P56556 154 aa2.33□□□□□ -2.04
RNU4-39P-201ENST00000362455 BATFQ16520 125 aa2.33□□□□□ -2.04
RNU4-39P-201ENST00000362455 TMEM170BQ5T4T1 132 aa2.33□□□□□ -2.04
RNU4-39P-201ENST00000362455 BAGE3Q86Y29 109 aa2.33□□□□□ -2.04
RNU4-39P-201ENST00000362455 TTTY13Q9BZ97 58 aa2.33□□□□□ -2.04
RNU4-39P-201ENST00000362455 NEBP20929 6669 aa2.32□□□□□ -2.04
RNU4-39P-201ENST00000362455 LINC01549A6NIU2 74 aa2.32□□□□□ -2.04
RNU4-39P-201ENST00000362455 SPRR1BP22528 89 aa2.32□□□□□ -2.04
RNU4-39P-201ENST00000362455 C9orf153Q5TBE3 101 aa2.32□□□□□ -2.04
RNU4-39P-201ENST00000362455 SOSTDC1Q6X4U4 206 aa2.32□□□□□ -2.04
RNU4-39P-201ENST00000362455 KRTAP5-2Q701N4 177 aa2.32□□□□□ -2.04
RNU4-39P-201ENST00000362455 TRBV10-2A0A0K0K1G8 114 aa2.31□□□□□ -2.04
RNU4-39P-201ENST00000362455 H7C2G1 150 aa2.31□□□□□ -2.04
RNU4-39P-201ENST00000362455 MT1FP04733 61 aa2.31□□□□□ -2.04
RNU4-39P-201ENST00000362455 SFTA2Q6UW10 78 aa2.31□□□□□ -2.04
RNU4-39P-201ENST00000362455 C18orf32Q8TCD1 76 aa2.31□□□□□ -2.04
RNU4-39P-201ENST00000362455 HBDP02042 147 aa2.3□□□□□ -2.04
RNU4-39P-201ENST00000362455 HINT1P49773 126 aaPredicted RBP2.3□□□□□ -2.04
RNU4-39P-201ENST00000362455 FABP9Q0Z7S8 132 aa2.3□□□□□ -2.04
RNU4-39P-201ENST00000362455 MEIG1Q5JSS6 88 aa2.3□□□□□ -2.04
RNU4-39P-201ENST00000362455 Q5XG85 94 aa2.3□□□□□ -2.04
RNU4-39P-201ENST00000362455 TRAV12-1A0A0B4J245 112 aa2.29□□□□□ -2.04
RNU4-39P-201ENST00000362455 Q6Q795 121 aa2.29□□□□□ -2.04
RNU4-39P-201ENST00000362455 LIMD2Q9BT23 127 aa2.29□□□□□ -2.04
RNU4-39P-201ENST00000362455 SMCO4Q9NRQ5 59 aa2.29□□□□□ -2.04
RNU4-39P-201ENST00000362455 TRAV23DV6A0A075B6W5 121 aa2.28□□□□□ -2.04
RNU4-39P-201ENST00000362455 A0A1B0GW54 56 aa2.28□□□□□ -2.04
RNU4-39P-201ENST00000362455 LST1O00453 97 aa2.28□□□□□ -2.04
RNU4-39P-201ENST00000362455 NDUFC2O95298 119 aa2.28□□□□□ -2.04
RNU4-39P-201ENST00000362455 PRO2289Q9P1D8 64 aa2.28□□□□□ -2.04
RNU4-39P-201ENST00000362455 MYMXA0A1B0GTQ4 84 aa2.27□□□□□ -2.05
RNU4-39P-201ENST00000362455 TMEM218A2RU14 115 aa2.27□□□□□ -2.05
RNU4-39P-201ENST00000362455 KRTAP12-1P59990 96 aa2.27□□□□□ -2.05
RNU4-39P-201ENST00000362455 NPC2P61916 151 aa2.27□□□□□ -2.05
RNU4-39P-201ENST00000362455 KRTAP19-6Q3LI70 58 aa2.27□□□□□ -2.05
RNU4-39P-201ENST00000362455 IFI27L1Q96BM0 104 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms