RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 SPINT4Q6UDR6 99 aa11.61□□□□□ -0.55
CLIP2-202ENST00000361545 NBEAL1Q6ZS30 2694 aa11.59□□□□□ -0.55
CLIP2-202ENST00000361545 KTN1-AS1Q86SY8 53 aa11.59□□□□□ -0.55
CLIP2-202ENST00000361545 UBR5O95071 2799 aaPredicted RBP11.58□□□□□ -0.55
CLIP2-202ENST00000361545 IGLV7-46A0A075B6I9 117 aa11.58□□□□□ -0.56
CLIP2-202ENST00000361545 UQCR11O14957 56 aa11.58□□□□□ -0.56
CLIP2-202ENST00000361545 KRTAP1-5Q9BYS1 174 aa11.56□□□□□ -0.56
CLIP2-202ENST00000361545 PLAC8Q9NZF1 115 aa11.55□□□□□ -0.56
CLIP2-202ENST00000361545 Q6ZSA8 131 aa11.53□□□□□ -0.56
CLIP2-202ENST00000361545 LINC01554Q52M75 96 aa11.53□□□□□ -0.56
CLIP2-202ENST00000361545 Q8NDZ9 215 aa11.5□□□□□ -0.57
CLIP2-202ENST00000361545 LCA10Q71F78 164 aa11.5□□□□□ -0.57
CLIP2-202ENST00000361545 MIR22HGQ0VDD5 57 aa11.49□□□□□ -0.57
CLIP2-202ENST00000361545 FRYQ5TBA9 3013 aa11.48□□□□□ -0.57
CLIP2-202ENST00000361545 FAM229BQ4G0N7 80 aa11.46□□□□□ -0.57
CLIP2-202ENST00000361545 NBEAL2Q6ZNJ1 2754 aa11.46□□□□□ -0.58
CLIP2-202ENST00000361545 LCE6AA0A183 80 aa11.42□□□□□ -0.58
CLIP2-202ENST00000361545 CELSR3Q9NYQ7 3312 aa11.41□□□□□ -0.58
CLIP2-202ENST00000361545 SZT2Q5T011 3432 aa11.41□□□□□ -0.58
CLIP2-202ENST00000361545 A0A0D9SG42 100 aa11.41□□□□□ -0.58
CLIP2-202ENST00000361545 SPRR1AP35321 89 aa11.39□□□□□ -0.59
CLIP2-202ENST00000361545 KRTAP10-2P60368 255 aa11.38□□□□□ -0.59
CLIP2-202ENST00000361545 KRTAP10-1P60331 282 aa11.37□□□□□ -0.59
CLIP2-202ENST00000361545 CDC42SE1Q9NRR8 79 aa11.37□□□□□ -0.59
CLIP2-202ENST00000361545 Q5VSD8 79 aa11.36□□□□□ -0.59
CLIP2-202ENST00000361545 SPANXA2-OT1Q8N9U9 137 aa11.36□□□□□ -0.59
CLIP2-202ENST00000361545 M0R2T5 61 aa11.36□□□□□ -0.59
CLIP2-202ENST00000361545 NSD1Q96L73 2696 aaPredicted RBP11.35□□□□□ -0.59
CLIP2-202ENST00000361545 FLNCQ14315 2725 aa11.35□□□□□ -0.59
CLIP2-202ENST00000361545 ITPR1Q14643 2758 aa11.34□□□□□ -0.59
CLIP2-202ENST00000361545 TACC2O95359 2948 aa11.34□□□□□ -0.59
CLIP2-202ENST00000361545 OCR1Q9BZK8 76 aa11.34□□□□□ -0.59
CLIP2-202ENST00000361545 KRTAP26-1Q6PEX3 210 aa11.33□□□□□ -0.6
CLIP2-202ENST00000361545 ITPR2Q14571 2701 aa11.33□□□□□ -0.6
CLIP2-202ENST00000361545 Q1T7F1 81 aa11.33□□□□□ -0.6
CLIP2-202ENST00000361545 REV3LO60673 3130 aa11.32□□□□□ -0.6
CLIP2-202ENST00000361545 ATMQ13315 3056 aa11.32□□□□□ -0.6
CLIP2-202ENST00000361545 CRIPTQ9P021 101 aa11.31□□□□□ -0.6
CLIP2-202ENST00000361545 Q5XG85 94 aa11.31□□□□□ -0.6
CLIP2-202ENST00000361545 FRYLO94915 3013 aa11.31□□□□□ -0.6
CLIP2-202ENST00000361545 CYSTM1Q9H1C7 97 aa11.27□□□□□ -0.61
CLIP2-202ENST00000361545 COL12A1Q99715 3063 aa11.27□□□□□ -0.61
CLIP2-202ENST00000361545 HRES1P13985 223 aa11.26□□□□□ -0.61
CLIP2-202ENST00000361545 MMP24-AS1A0A0U1RRL7 71 aa11.25□□□□□ -0.61
CLIP2-202ENST00000361545 VCANP13611 3396 aa11.25□□□□□ -0.61
CLIP2-202ENST00000361545 FREM2Q5SZK8 3169 aa11.25□□□□□ -0.61
CLIP2-202ENST00000361545 ZCCHC13Q8WW36 166 aaKnown RBP11.24□□□□□ -0.61
CLIP2-202ENST00000361545 LAMA1P25391 3075 aa11.24□□□□□ -0.61
CLIP2-202ENST00000361545 STAB2Q8WWQ8 2551 aa11.23□□□□□ -0.61
CLIP2-202ENST00000361545 SPRR1BP22528 89 aa11.23□□□□□ -0.61
CLIP2-202ENST00000361545 FP248Q71RG6 208 aaPredicted RBP11.21□□□□□ -0.61
CLIP2-202ENST00000361545 PANO1I0J062 215 aa11.2□□□□□ -0.62
CLIP2-202ENST00000361545 Q8N9P0 234 aaPredicted RBP11.2□□□□□ -0.62
CLIP2-202ENST00000361545 FLG2Q5D862 2391 aaPredicted RBP11.16□□□□□ -0.62
CLIP2-202ENST00000361545 DMXL2Q8TDJ6 3036 aa11.16□□□□□ -0.62
CLIP2-202ENST00000361545 BOD1L1Q8NFC6 3051 aa11.16□□□□□ -0.62
CLIP2-202ENST00000361545 LINC00472Q9H8W2 130 aa11.16□□□□□ -0.62
CLIP2-202ENST00000361545 Q6ZR54 194 aa11.15□□□□□ -0.62
CLIP2-202ENST00000361545 COL6A3P12111 3177 aa11.13□□□□□ -0.63
CLIP2-202ENST00000361545 KALRNO60229 2985 aa11.13□□□□□ -0.63
CLIP2-202ENST00000361545 SPINK7P58062 85 aa11.11□□□□□ -0.63
CLIP2-202ENST00000361545 Q75L30 129 aa11.11□□□□□ -0.63
CLIP2-202ENST00000361545 CAMK2N1Q7Z7J9 78 aa11.1□□□□□ -0.63
CLIP2-202ENST00000361545 DNAH14Q0VDD8 3507 aa11.09□□□□□ -0.63
CLIP2-202ENST00000361545 Q5W150 140 aa11.09□□□□□ -0.63
CLIP2-202ENST00000361545 CSAG1Q6PB30 78 aa11.08□□□□□ -0.64
CLIP2-202ENST00000361545 HIVEP1P15822 2718 aa11.08□□□□□ -0.64
CLIP2-202ENST00000361545 SEC61BP60468 96 aaKnown RBP11.08□□□□□ -0.64
CLIP2-202ENST00000361545 ADGRG4Q8IZF6 3080 aa11.07□□□□□ -0.64
CLIP2-202ENST00000361545 A0A1B0GU33 70 aa11.06□□□□□ -0.64
CLIP2-202ENST00000361545 S4R3F8 94 aa11.06□□□□□ -0.64
CLIP2-202ENST00000361545 UTP20O75691 2785 aaKnown RBP11.06□□□□□ -0.64
CLIP2-202ENST00000361545 OXTP01178 125 aa11.04□□□□□ -0.64
CLIP2-202ENST00000361545 PRAC1Q96KF2 57 aa11.02□□□□□ -0.65
CLIP2-202ENST00000361545 DMBT1Q9UGM3 2413 aaPredicted RBP11.01□□□□□ -0.65
CLIP2-202ENST00000361545 LRBAP50851 2863 aa11□□□□□ -0.65
CLIP2-202ENST00000361545 LINC00483Q53H64 154 aa11□□□□□ -0.65
CLIP2-202ENST00000361545 H3BS24 57 aa11□□□□□ -0.65
CLIP2-202ENST00000361545 TENM4Q6N022 2769 aa10.99□□□□□ -0.65
CLIP2-202ENST00000361545 CRYBG3Q68DQ2 2970 aa10.99□□□□□ -0.65
CLIP2-202ENST00000361545 LINC01558Q9Y6Z2 57 aa10.99□□□□□ -0.65
CLIP2-202ENST00000361545 Q5VV11 94 aa10.98□□□□□ -0.65
CLIP2-202ENST00000361545 A0A087X002 238 aa10.98□□□□□ -0.65
CLIP2-202ENST00000361545 KRTAP4-16G5E9R7 235 aaPredicted RBP10.96□□□□□ -0.65
CLIP2-202ENST00000361545 NBEAQ8NFP9 2946 aa10.94□□□□□ -0.66
CLIP2-202ENST00000361545 KMT2BQ9UMN6 2715 aaPredicted RBP10.93□□□□□ -0.66
CLIP2-202ENST00000361545 ASH1LQ9NR48 2969 aaKnown RBP10.92□□□□□ -0.66
CLIP2-202ENST00000361545 ZZEF1O43149 2961 aa10.91□□□□□ -0.66
CLIP2-202ENST00000361545 EYSQ5T1H1 3165 aa10.91□□□□□ -0.66
CLIP2-202ENST00000361545 Q6ZRN7 208 aaPredicted RBP10.9□□□□□ -0.66
CLIP2-202ENST00000361545 CFAP47Q6ZTR5 3102 aa10.89□□□□□ -0.67
CLIP2-202ENST00000361545 R4GN34 69 aa10.87□□□□□ -0.67
CLIP2-202ENST00000361545 APCP25054 2843 aa10.87□□□□□ -0.67
CLIP2-202ENST00000361545 TNRC18O15417 2968 aaPredicted RBP10.87□□□□□ -0.67
CLIP2-202ENST00000361545 KRTAP11-1Q8IUC1 163 aa10.87□□□□□ -0.67
CLIP2-202ENST00000361545 LUZP6Q538Z0 58 aa10.82□□□□□ -0.68
CLIP2-202ENST00000361545 CELSR2Q9HCU4 2923 aa10.81□□□□□ -0.68
CLIP2-202ENST00000361545 DMAC1Q96GE9 116 aa10.8□□□□□ -0.68
CLIP2-202ENST00000361545 NIPBLQ6KC79 2804 aaeCLIP10.77□□□□□ -0.69
CLIP2-202ENST00000361545 SPTBN5Q9NRC6 3674 aaKnown RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms