RNA–Protein interactions for RNA: ENST00000360046.9

HOXA4-201, Transcript of homeobox A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA4, Length 1,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-201ENST00000360046 PLA2G1BP04054 148 aaKnown RBP13.25□□□□□ -0.29
HOXA4-201ENST00000360046 GAGE2AQ6NT46 116 aa13.25□□□□□ -0.29
HOXA4-201ENST00000360046 Q8N377 158 aa13.25□□□□□ -0.29
HOXA4-201ENST00000360046 ZNF706Q9Y5V0 76 aaPredicted RBP13.24□□□□□ -0.29
HOXA4-201ENST00000360046 HERC2O95714 4834 aa13.23□□□□□ -0.29
HOXA4-201ENST00000360046 TEX49A0A1B0GTD5 131 aa13.23□□□□□ -0.29
HOXA4-201ENST00000360046 Q5VSD8 79 aa13.23□□□□□ -0.29
HOXA4-201ENST00000360046 SPRR4Q96PI1 79 aa13.22□□□□□ -0.29
HOXA4-201ENST00000360046 FAM240AA0A1B0GVK7 77 aa13.21□□□□□ -0.3
HOXA4-201ENST00000360046 KRTAP10-4P60372 401 aaPredicted RBP13.2□□□□□ -0.3
HOXA4-201ENST00000360046 LAMTOR3Q9UHA4 124 aa13.2□□□□□ -0.3
HOXA4-201ENST00000360046 A0A1B0GV72 72 aa13.19□□□□□ -0.3
HOXA4-201ENST00000360046 C3orf22Q8N5N4 141 aa13.19□□□□□ -0.3
HOXA4-201ENST00000360046 Q8N1X5 172 aa13.19□□□□□ -0.3
HOXA4-201ENST00000360046 KRTAP17-1Q9BYP8 105 aa13.17□□□□□ -0.3
HOXA4-201ENST00000360046 ACYP1P07311 99 aa13.16□□□□□ -0.3
HOXA4-201ENST00000360046 SPINK6Q6UWN8 80 aa13.16□□□□□ -0.3
HOXA4-201ENST00000360046 SPRR1BP22528 89 aa13.16□□□□□ -0.3
HOXA4-201ENST00000360046 NDUFV3P56181 108 aaKnown RBP13.16□□□□□ -0.3
HOXA4-201ENST00000360046 MT-ATP8P03928 68 aa13.13□□□□□ -0.31
HOXA4-201ENST00000360046 LINC00483Q53H64 154 aa13.13□□□□□ -0.31
HOXA4-201ENST00000360046 ANAPC11Q9NYG5 84 aa13.13□□□□□ -0.31
HOXA4-201ENST00000360046 SMIM29Q86T20 159 aa13.13□□□□□ -0.31
HOXA4-201ENST00000360046 F8WEM9 126 aa13.11□□□□□ -0.31
HOXA4-201ENST00000360046 JMJD7-PLA2G4BH0Y9G9 81 aa13.09□□□□□ -0.31
HOXA4-201ENST00000360046 RBM3P98179 157 aaKnown RBP13.07□□□□□ -0.32
HOXA4-201ENST00000360046 Q6Q795 121 aa13.07□□□□□ -0.32
HOXA4-201ENST00000360046 IGLV9-49A0A0B4J1Y8 123 aa13.06□□□□□ -0.32
HOXA4-201ENST00000360046 OBSCN-AS1Q96MR7 158 aa13.06□□□□□ -0.32
HOXA4-201ENST00000360046 C14orf132Q9NPU4 83 aa13.05□□□□□ -0.32
HOXA4-201ENST00000360046 KRTAP1-4P0C5Y4 121 aa13.04□□□□□ -0.32
HOXA4-201ENST00000360046 C9orf153Q5TBE3 101 aa13.03□□□□□ -0.32
HOXA4-201ENST00000360046 PKHD1L1Q86WI1 4243 aa13.02□□□□□ -0.32
HOXA4-201ENST00000360046 DSCR8Q96T75 97 aa13.02□□□□□ -0.32
HOXA4-201ENST00000360046 PCLOQ9Y6V0 5065 aa13.01□□□□□ -0.33
HOXA4-201ENST00000360046 FAM229BQ4G0N7 80 aa13□□□□□ -0.33
HOXA4-201ENST00000360046 A0A087X002 238 aa12.99□□□□□ -0.33
HOXA4-201ENST00000360046 MOBPQ13875 183 aa12.99□□□□□ -0.33
HOXA4-201ENST00000360046 IGLV8-61A0A075B6I0 122 aa12.97□□□□□ -0.33
HOXA4-201ENST00000360046 CRYGAP11844 174 aa12.97□□□□□ -0.33
HOXA4-201ENST00000360046 TRBV7-4A0A0J9YYF1 115 aa12.96□□□□□ -0.33
HOXA4-201ENST00000360046 KRTAP4-5Q9BYR2 181 aa12.96□□□□□ -0.33
HOXA4-201ENST00000360046 Q8NBF4 154 aa12.96□□□□□ -0.34
HOXA4-201ENST00000360046 IMUPQ9GZP8 106 aa12.95□□□□□ -0.34
HOXA4-201ENST00000360046 LOC110117498A0A087WWA1 95 aa12.94□□□□□ -0.34
HOXA4-201ENST00000360046 A0A0G2JQZ4 141 aa12.94□□□□□ -0.34
HOXA4-201ENST00000360046 Q6JHZ5 121 aa12.93□□□□□ -0.34
HOXA4-201ENST00000360046 IGFL1Q6UW32 110 aa12.93□□□□□ -0.34
HOXA4-201ENST00000360046 LINC00643Q86TS7 51 aa12.93□□□□□ -0.34
HOXA4-201ENST00000360046 KRTAP13-2Q52LG2 175 aa12.93□□□□□ -0.34
HOXA4-201ENST00000360046 Q6ZQT0 140 aa12.93□□□□□ -0.34
HOXA4-201ENST00000360046 ABCA13Q86UQ4 5058 aa12.92□□□□□ -0.34
HOXA4-201ENST00000360046 PDE6GP18545 87 aa12.92□□□□□ -0.34
HOXA4-201ENST00000360046 TRBV7-7A0A0K0K1E9 115 aa12.91□□□□□ -0.34
HOXA4-201ENST00000360046 CCKP06307 115 aa12.91□□□□□ -0.34
HOXA4-201ENST00000360046 PRR26Q8N8Z3 221 aa12.9□□□□□ -0.34
HOXA4-201ENST00000360046 ANAPC13Q9BS18 74 aa12.87□□□□□ -0.35
HOXA4-201ENST00000360046 SSBP3-AS1Q7Z2R9 100 aa12.86□□□□□ -0.35
HOXA4-201ENST00000360046 TYMSOSQ8TAI1 123 aa12.86□□□□□ -0.35
HOXA4-201ENST00000360046 A0A1W2PNM2 257 aa12.85□□□□□ -0.35
HOXA4-201ENST00000360046 FLG2Q5D862 2391 aaPredicted RBP12.84□□□□□ -0.35
HOXA4-201ENST00000360046 HRCT1Q6UXD1 115 aa12.82□□□□□ -0.36
HOXA4-201ENST00000360046 LRP1Q07954 4544 aaKnown RBP12.8□□□□□ -0.36
HOXA4-201ENST00000360046 MYCBP2O75592 4640 aa12.78□□□□□ -0.36
HOXA4-201ENST00000360046 FAT3Q8TDW7 4589 aa12.75□□□□□ -0.37
HOXA4-201ENST00000360046 A0A087WSZ3 146 aa12.73□□□□□ -0.37
HOXA4-201ENST00000360046 C4orf48Q5BLP8 95 aa12.72□□□□□ -0.37
HOXA4-201ENST00000360046 CD164Q04900 197 aa12.71□□□□□ -0.37
HOXA4-201ENST00000360046 LINC00304Q8N9R0 145 aa12.71□□□□□ -0.37
HOXA4-201ENST00000360046 LINC00846Q9NV44 126 aa12.71□□□□□ -0.37
HOXA4-201ENST00000360046 A0A1B0GW54 56 aa12.71□□□□□ -0.38
HOXA4-201ENST00000360046 OXTP01178 125 aa12.69□□□□□ -0.38
HOXA4-201ENST00000360046 KRTAP10-8P60410 259 aa12.68□□□□□ -0.38
HOXA4-201ENST00000360046 ATP5EP2Q5VTU8 51 aa12.68□□□□□ -0.38
HOXA4-201ENST00000360046 FAM236AA0A1B0GUQ0 79 aa12.65□□□□□ -0.38
HOXA4-201ENST00000360046 FAM236BA0A1B0GV22 79 aa12.65□□□□□ -0.38
HOXA4-201ENST00000360046 TNXBP22105 4242 aa12.65□□□□□ -0.38
HOXA4-201ENST00000360046 UBL5Q9BZL1 73 aa12.64□□□□□ -0.39
HOXA4-201ENST00000360046 SPAG11AQ6PDA7 123 aa12.63□□□□□ -0.39
HOXA4-201ENST00000360046 SPINK1P00995 79 aa12.62□□□□□ -0.39
HOXA4-201ENST00000360046 SS18L2Q9UHA2 77 aa12.62□□□□□ -0.39
HOXA4-201ENST00000360046 KRTAP29-1A8MX34 341 aaPredicted RBP12.62□□□□□ -0.39
HOXA4-201ENST00000360046 NREPQ16612 68 aa12.62□□□□□ -0.39
HOXA4-201ENST00000360046 Q6ZVQ6 151 aa12.61□□□□□ -0.39
HOXA4-201ENST00000360046 MT1HL1P0DM35 61 aa12.6□□□□□ -0.39
HOXA4-201ENST00000360046 HIST1H4AP62805 103 aaKnown RBP12.59□□□□□ -0.39
HOXA4-201ENST00000360046 LIMD2Q9BT23 127 aa12.59□□□□□ -0.39
HOXA4-201ENST00000360046 ATOX1O00244 68 aa12.57□□□□□ -0.4
HOXA4-201ENST00000360046 J3QL48 77 aa12.56□□□□□ -0.4
HOXA4-201ENST00000360046 IGKV3D-7A0A0C4DH55 119 aa12.55□□□□□ -0.4
HOXA4-201ENST00000360046 RPS29P62273 56 aaKnown RBP12.54□□□□□ -0.4
HOXA4-201ENST00000360046 CCDC179H3BU77 68 aa12.54□□□□□ -0.4
HOXA4-201ENST00000360046 Q5XG85 94 aa12.53□□□□□ -0.4
HOXA4-201ENST00000360046 DEFB116Q30KQ4 102 aa12.51□□□□□ -0.41
HOXA4-201ENST00000360046 UQCRQO14949 82 aa12.51□□□□□ -0.41
HOXA4-201ENST00000360046 DMBT1Q9UGM3 2413 aaPredicted RBP12.5□□□□□ -0.41
HOXA4-201ENST00000360046 ASB16-AS1Q495Z4 193 aa12.49□□□□□ -0.41
HOXA4-201ENST00000360046 LINC00472Q9H8W2 130 aa12.49□□□□□ -0.41
HOXA4-201ENST00000360046 BPY2O14599 106 aa12.48□□□□□ -0.41
HOXA4-201ENST00000360046 Q96NJ1 140 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms